Warning: Permanently added '3.228.12.178' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/9898862-fedora-rawhide-x86_64 --chroot fedora-rawhide-x86_64 Version: 1.6 PID: 8783 Logging PID: 8785 Task: {'allow_user_ssh': False, 'appstream': False, 'background': False, 'build_id': 9898862, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': '8fbd2335254f021dc7dd5e4d12e9f3c645ac9986', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/davidsch/testing/bout++', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'bout++', 'package_version': '5.2.0-4', 'project_dirname': 'testing', 'project_name': 'testing', 'project_owner': 'davidsch', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/davidsch/testing/fedora-rawhide-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}], 'sandbox': 'davidsch/testing--davidsch', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': 0, 'submitter': 'davidsch', 'tags': [], 'task_id': '9898862-fedora-rawhide-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/davidsch/testing/bout++ /var/lib/copr-rpmbuild/workspace/workdir-k2tkz64z/bout++ --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/davidsch/testing/bout++', '/var/lib/copr-rpmbuild/workspace/workdir-k2tkz64z/bout++', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-k2tkz64z/bout++'... Running: git checkout 8fbd2335254f021dc7dd5e4d12e9f3c645ac9986 -- cmd: ['git', 'checkout', '8fbd2335254f021dc7dd5e4d12e9f3c645ac9986', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-k2tkz64z/bout++ rc: 0 stdout: stderr: Note: switching to '8fbd2335254f021dc7dd5e4d12e9f3c645ac9986'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 8fbd233 automatic import of bout++ Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-k2tkz64z/bout++ rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading BOUT++-v5.2.0.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o BOUT++-v5.2.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/davidsch/testing/bout++/BOUT++-v5.2.0.tar.gz/md5/a12adf302b00dbb7d05e4c71cb47c17e/BOUT++-v5.2.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 14.3M 100 14.3M 0 0 16.6M 0 --:--:-- --:--:-- --:--:-- 16.6M INFO: Reading stdout from command: md5sum BOUT++-v5.2.0.tar.gz tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-k2tkz64z/bout++/bout++.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-k2tkz64z/bout++ --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1765453338.506648 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 6.6 starting (python version = 3.13.7, NVR = mock-6.6-1.fc42), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-k2tkz64z/bout++/bout++.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-k2tkz64z/bout++ --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1765453338.506648 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-k2tkz64z/bout++/bout++.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 6.6 INFO: Mock Version: 6.6 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1765453338.506648/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using container image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Tagging container image as mock-bootstrap-a711d898-54fd-47f3-a136-79f9e1df91fc INFO: Checking that dedfae359002fd20ad1ff1c97cbd59103a218634dc9c68f9aba1f6426b327edb image matches host's architecture INFO: Copy content of container dedfae359002fd20ad1ff1c97cbd59103a218634dc9c68f9aba1f6426b327edb to /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1765453338.506648/root INFO: mounting dedfae359002fd20ad1ff1c97cbd59103a218634dc9c68f9aba1f6426b327edb with podman image mount INFO: image dedfae359002fd20ad1ff1c97cbd59103a218634dc9c68f9aba1f6426b327edb as /var/lib/containers/storage/overlay/3cae8f332e37fa0431d3fbbd764256cfb832fce892b38571f2e63d4fb9348f29/merged INFO: umounting image dedfae359002fd20ad1ff1c97cbd59103a218634dc9c68f9aba1f6426b327edb (/var/lib/containers/storage/overlay/3cae8f332e37fa0431d3fbbd764256cfb832fce892b38571f2e63d4fb9348f29/merged) with podman image umount INFO: Removing image mock-bootstrap-a711d898-54fd-47f3-a136-79f9e1df91fc INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1765453338.506648/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-6.0.0-1.fc44.x86_64 rpm-sequoia-1.9.0-2.fc43.x86_64 dnf5-5.3.0.0-3.fc44.x86_64 dnf5-plugins-5.3.0.0-3.fc44.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: Copr repository 100% | 78.7 KiB/s | 23.1 KiB | 00m00s fedora 100% | 21.2 MiB/s | 21.8 MiB | 00m01s >>> Downloading successful, but checksum doesn't match. Calculated: 13f51159a7fd4152496ca70354ecd456d7559dd688c9db5667f9567422af75d4c33bc309c30c042b336955730e99b7eaa716b4f60c594e3f2aae43d8902fa327(sha512) 13f51159a7fd4152496ca70354ecd456d7559dd688c9db5667f9567422af75d4c33bc309c30c042b336955730e99b7eaa716b4f60c594e3f2aae43d8902fa327(sha512) 13f51159a7fd4152496ca70354ecd456d7559dd688c9db5667f9567422af75d4c33bc309c30c042b336955730e99b7eaa716b4f60c594e3f2aae43d8902fa327(sha512) Expected: 6e03bb82132e9bc34c60f0f5946ef56f9328ee86d891958922bbf10f948ce920ba99869443ae111a2df6274875bd789b103decdad51fa4872404c2b0a06bbc77(sha512) 1aee299a2a0ae33f78e227fe98bc232024662d751a003614b9f1f964bd7beb4d54e0b1f9abb3dd7d34eb7489ba0b78965da6ccd28a99a7f21267672c703a1e45(sha512) 3a3aafdfd1b93f09b1ad4c49bb15081d0a31da0334c9a6efd25aca494359cff1a3a2741278b1a95cdf4983b84fb267feb9b9dcb3933412880170e2d2c77546b7(sha512) - https://d2lzkl7pfhq30w.cloudfront.net/pub/fedora/linux/development/rawhide/Everything/x86_64/os/repodata/repomd.xml Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash x86_64 0:5.3.0-2.fc43 fedora 8.4 MiB bzip2 x86_64 0:1.0.8-21.fc43 fedora 95.3 KiB coreutils x86_64 0:9.9-1.fc44 fedora 5.4 MiB cpio x86_64 0:2.15-6.fc43 fedora 1.1 MiB diffutils x86_64 0:3.12-3.fc43 fedora 1.6 MiB fedora-release-common noarch 0:44-0.8 fedora 20.8 KiB findutils x86_64 1:4.10.0-6.fc43 fedora 1.8 MiB gawk x86_64 0:5.3.2-2.fc43 fedora 1.8 MiB glibc-minimal-langpack x86_64 0:2.42.9000-15.fc44 fedora 0.0 B grep x86_64 0:3.12-2.fc43 fedora 1.0 MiB gzip x86_64 0:1.14-1.fc44 fedora 397.8 KiB info x86_64 0:7.2-7.fc44 fedora 357.9 KiB patch x86_64 0:2.8-2.fc43 fedora 222.8 KiB redhat-rpm-config noarch 0:343-16.fc44 fedora 183.6 KiB rpm-build x86_64 0:6.0.0-1.fc44 fedora 287.4 KiB sed x86_64 0:4.9-6.fc44 fedora 857.3 KiB shadow-utils x86_64 2:4.18.0-7.fc44 fedora 3.9 MiB tar x86_64 2:1.35-6.fc43 fedora 2.9 MiB unzip x86_64 0:6.0-68.fc44 fedora 390.3 KiB util-linux x86_64 0:2.41.2-9.fc44 fedora 3.5 MiB which x86_64 0:2.23-3.fc43 fedora 83.5 KiB xz x86_64 1:5.8.1-4.fc44 fedora 1.3 MiB Installing dependencies: add-determinism x86_64 0:0.7.2-2.fc44 fedora 2.3 MiB alternatives x86_64 0:1.33-3.fc44 fedora 62.2 KiB ansible-srpm-macros noarch 0:1-18.1.fc43 fedora 35.7 KiB audit-libs x86_64 0:4.1.2-2.fc44 fedora 378.8 KiB binutils x86_64 0:2.45.50-9.fc44 fedora 27.0 MiB build-reproducibility-srpm-macros noarch 0:0.7.2-2.fc44 fedora 1.2 KiB bzip2-libs x86_64 0:1.0.8-21.fc43 fedora 80.6 KiB ca-certificates noarch 0:2025.2.80_v9.0.304-2.fc44 fedora 2.7 MiB coreutils-common x86_64 0:9.9-1.fc44 fedora 11.2 MiB crypto-policies noarch 0:20251128-1.git19878fe.fc44 fedora 132.6 KiB curl x86_64 0:8.18.0~rc1-1.fc44 fedora 467.1 KiB cyrus-sasl-lib x86_64 0:2.1.28-33.fc44 fedora 2.3 MiB debugedit x86_64 0:5.2-3.fc44 fedora 214.0 KiB dwz x86_64 0:0.16-2.fc43 fedora 287.1 KiB ed x86_64 0:1.22.3-1.fc44 fedora 148.9 KiB efi-srpm-macros noarch 0:6-5.fc44 fedora 40.2 KiB elfutils x86_64 0:0.194-2.fc44 fedora 2.9 MiB elfutils-debuginfod-client x86_64 0:0.194-2.fc44 fedora 84.0 KiB elfutils-default-yama-scope noarch 0:0.194-2.fc44 fedora 1.8 KiB elfutils-libelf x86_64 0:0.194-2.fc44 fedora 1.1 MiB elfutils-libs x86_64 0:0.194-2.fc44 fedora 687.5 KiB fedora-gpg-keys noarch 0:44-0.1 fedora 131.2 KiB fedora-release noarch 0:44-0.8 fedora 0.0 B fedora-release-identity-basic noarch 0:44-0.8 fedora 664.0 B fedora-repos noarch 0:44-0.1 fedora 4.9 KiB fedora-repos-rawhide noarch 0:44-0.1 fedora 2.2 KiB file x86_64 0:5.46-8.fc44 fedora 100.2 KiB file-libs x86_64 0:5.46-8.fc44 fedora 11.9 MiB filesystem x86_64 0:3.18-50.fc43 fedora 112.0 B filesystem-srpm-macros noarch 0:3.18-50.fc43 fedora 38.2 KiB fonts-srpm-macros noarch 1:5.0.0-1.fc44 fedora 55.8 KiB forge-srpm-macros noarch 0:0.4.0-3.fc43 fedora 38.9 KiB fpc-srpm-macros noarch 0:1.3-15.fc43 fedora 144.0 B gap-srpm-macros noarch 0:2-1.fc44 fedora 2.1 KiB gdb-minimal x86_64 0:16.3-6.fc44 fedora 13.3 MiB gdbm-libs x86_64 1:1.23-10.fc43 fedora 129.9 KiB ghc-srpm-macros noarch 0:1.9.2-3.fc43 fedora 779.0 B glibc x86_64 0:2.42.9000-15.fc44 fedora 6.8 MiB glibc-common x86_64 0:2.42.9000-15.fc44 fedora 1.0 MiB glibc-gconv-extra x86_64 0:2.42.9000-15.fc44 fedora 7.2 MiB gmp x86_64 1:6.3.0-4.fc44 fedora 815.3 KiB gnat-srpm-macros noarch 0:6-8.fc43 fedora 1.0 KiB gnulib-l10n noarch 0:20241231-1.fc44 fedora 655.0 KiB gnupg2 x86_64 0:2.4.8-4.fc43 fedora 6.5 MiB gnupg2-dirmngr x86_64 0:2.4.8-4.fc43 fedora 618.4 KiB gnupg2-gpg-agent x86_64 0:2.4.8-4.fc43 fedora 671.4 KiB gnupg2-gpgconf x86_64 0:2.4.8-4.fc43 fedora 250.0 KiB gnupg2-keyboxd x86_64 0:2.4.8-4.fc43 fedora 201.4 KiB gnupg2-verify x86_64 0:2.4.8-4.fc43 fedora 348.5 KiB gnutls x86_64 0:3.8.11-6.fc44 fedora 3.6 MiB go-srpm-macros noarch 0:3.8.0-1.fc44 fedora 61.9 KiB gpgverify noarch 0:2.2-3.fc43 fedora 8.7 KiB ima-evm-utils-libs x86_64 0:1.6.2-7.fc44 fedora 60.7 KiB jansson x86_64 0:2.14-3.fc43 fedora 89.1 KiB java-srpm-macros noarch 0:1-7.fc43 fedora 870.0 B json-c x86_64 0:0.18-7.fc43 fedora 82.7 KiB kernel-srpm-macros noarch 0:1.0-27.fc43 fedora 1.9 KiB keyutils-libs x86_64 0:1.6.3-6.fc43 fedora 54.3 KiB krb5-libs x86_64 0:1.21.3-10.fc44 fedora 2.3 MiB libacl x86_64 0:2.3.2-4.fc43 fedora 35.9 KiB libarchive x86_64 0:3.8.4-1.fc44 fedora 955.3 KiB libassuan x86_64 0:2.5.7-4.fc43 fedora 163.8 KiB libattr x86_64 0:2.5.2-6.fc43 fedora 24.4 KiB libblkid x86_64 0:2.41.2-9.fc44 fedora 262.4 KiB libbrotli x86_64 0:1.1.0-10.fc44 fedora 833.3 KiB libcap x86_64 0:2.77-1.fc44 fedora 209.1 KiB libcap-ng x86_64 0:0.8.5-8.fc44 fedora 68.9 KiB libcom_err x86_64 0:1.47.3-3.fc44 fedora 63.1 KiB libcurl x86_64 0:8.18.0~rc1-1.fc44 fedora 981.0 KiB libeconf x86_64 0:0.7.9-2.fc43 fedora 64.9 KiB libevent x86_64 0:2.1.12-16.fc43 fedora 883.1 KiB libfdisk x86_64 0:2.41.2-9.fc44 fedora 380.4 KiB libffi x86_64 0:3.5.2-1.fc44 fedora 83.8 KiB libfsverity x86_64 0:1.6-3.fc43 fedora 28.5 KiB libgcc x86_64 0:15.2.1-4.fc44 fedora 266.6 KiB libgcrypt x86_64 0:1.11.2-1.fc44 fedora 1.6 MiB libgomp x86_64 0:15.2.1-4.fc44 fedora 541.6 KiB libgpg-error x86_64 0:1.56-1.fc44 fedora 916.6 KiB libidn2 x86_64 0:2.3.8-2.fc43 fedora 552.5 KiB libksba x86_64 0:1.6.7-4.fc43 fedora 398.5 KiB liblastlog2 x86_64 0:2.41.2-9.fc44 fedora 33.9 KiB libmount x86_64 0:2.41.2-9.fc44 fedora 372.7 KiB libnghttp2 x86_64 0:1.68.0-2.fc44 fedora 162.2 KiB libnghttp3 x86_64 0:1.13.1-1.fc44 fedora 155.3 KiB libpkgconf x86_64 0:2.3.0-3.fc43 fedora 78.1 KiB libpsl x86_64 0:0.21.5-6.fc43 fedora 76.4 KiB libselinux x86_64 0:3.9-5.fc44 fedora 193.1 KiB libselinux-utils x86_64 0:3.9-5.fc44 fedora 309.0 KiB libsemanage x86_64 0:3.9-4.fc44 fedora 308.5 KiB libsepol x86_64 0:3.9-2.fc43 fedora 822.0 KiB libsmartcols x86_64 0:2.41.2-9.fc44 fedora 180.5 KiB libssh x86_64 0:0.11.3-1.fc44 fedora 567.1 KiB libssh-config noarch 0:0.11.3-1.fc44 fedora 277.0 B libstdc++ x86_64 0:15.2.1-4.fc44 fedora 2.8 MiB libtasn1 x86_64 0:4.20.0-2.fc43 fedora 176.3 KiB libtool-ltdl x86_64 0:2.5.4-8.fc44 fedora 70.1 KiB libunistring x86_64 0:1.1-10.fc43 fedora 1.7 MiB libusb1 x86_64 0:1.0.29-4.fc44 fedora 171.3 KiB libuuid x86_64 0:2.41.2-9.fc44 fedora 37.3 KiB libverto x86_64 0:0.3.2-11.fc43 fedora 25.4 KiB libxcrypt x86_64 0:4.5.2-1.fc44 fedora 285.3 KiB libxml2 x86_64 0:2.12.10-5.fc44 fedora 1.7 MiB libzstd x86_64 0:1.5.7-3.fc44 fedora 940.3 KiB linkdupes x86_64 0:0.7.2-2.fc44 fedora 838.7 KiB lua-libs x86_64 0:5.4.8-4.fc44 fedora 281.9 KiB lua-srpm-macros noarch 0:1-16.fc43 fedora 1.3 KiB lz4-libs x86_64 0:1.10.0-3.fc43 fedora 161.4 KiB mpfr x86_64 0:4.2.2-2.fc43 fedora 832.8 KiB ncurses-base noarch 0:6.5-8.20250614.fc44 fedora 328.1 KiB ncurses-libs x86_64 0:6.5-8.20250614.fc44 fedora 946.4 KiB nettle x86_64 0:3.10.1-2.fc43 fedora 790.6 KiB ngtcp2 x86_64 0:1.18.0-1.fc44 fedora 314.3 KiB ngtcp2-crypto-ossl x86_64 0:1.18.0-1.fc44 fedora 51.7 KiB npth x86_64 0:1.8-3.fc43 fedora 49.6 KiB ocaml-srpm-macros noarch 0:11-2.fc43 fedora 1.9 KiB openblas-srpm-macros noarch 0:2-20.fc43 fedora 112.0 B openldap x86_64 0:2.6.10-4.fc44 fedora 659.8 KiB openssl-libs x86_64 1:3.5.4-1.fc44 fedora 8.9 MiB p11-kit x86_64 0:0.25.8-1.fc44 fedora 2.3 MiB p11-kit-trust x86_64 0:0.25.8-1.fc44 fedora 446.5 KiB package-notes-srpm-macros noarch 0:0.5-14.fc43 fedora 1.6 KiB pam-libs x86_64 0:1.7.1-3.fc43 fedora 126.8 KiB pcre2 x86_64 0:10.47-1.fc44 fedora 702.6 KiB pcre2-syntax noarch 0:10.47-1.fc44 fedora 281.9 KiB perl-srpm-macros noarch 0:1-60.fc43 fedora 861.0 B pkgconf x86_64 0:2.3.0-3.fc43 fedora 88.5 KiB pkgconf-m4 noarch 0:2.3.0-3.fc43 fedora 14.4 KiB pkgconf-pkg-config x86_64 0:2.3.0-3.fc43 fedora 989.0 B policycoreutils x86_64 0:3.9-5.fc44 fedora 683.5 KiB popt x86_64 0:1.19-9.fc43 fedora 132.8 KiB publicsuffix-list-dafsa noarch 0:20250616-2.fc43 fedora 69.1 KiB pyproject-srpm-macros noarch 0:1.18.6-1.fc44 fedora 1.9 KiB python-srpm-macros noarch 0:3.14-9.fc44 fedora 51.6 KiB qt5-srpm-macros noarch 0:5.15.18-1.fc44 fedora 500.0 B qt6-srpm-macros noarch 0:6.10.1-1.fc44 fedora 464.0 B readline x86_64 0:8.3-2.fc43 fedora 511.7 KiB rpm x86_64 0:6.0.0-1.fc44 fedora 3.1 MiB rpm-build-libs x86_64 0:6.0.0-1.fc44 fedora 268.4 KiB rpm-libs x86_64 0:6.0.0-1.fc44 fedora 933.8 KiB rpm-plugin-selinux x86_64 0:6.0.0-1.fc44 fedora 12.0 KiB rpm-sequoia x86_64 0:1.9.0-2.fc43 fedora 2.5 MiB rpm-sign-libs x86_64 0:6.0.0-1.fc44 fedora 39.7 KiB rust-srpm-macros noarch 0:28.4-1.fc44 fedora 5.5 KiB selinux-policy noarch 0:42.19-1.fc44 fedora 32.0 KiB selinux-policy-targeted noarch 0:42.19-1.fc44 fedora 18.7 MiB setup noarch 0:2.15.0-27.fc44 fedora 724.9 KiB sqlite-libs x86_64 0:3.51.0-1.fc44 fedora 1.5 MiB systemd-libs x86_64 0:259~rc2-2.fc44 fedora 2.3 MiB systemd-standalone-sysusers x86_64 0:259~rc2-2.fc44 fedora 293.7 KiB tpm2-tss x86_64 0:4.1.3-8.fc43 fedora 1.6 MiB tree-sitter-srpm-macros noarch 0:0.4.2-1.fc43 fedora 8.3 KiB util-linux-core x86_64 0:2.41.2-9.fc44 fedora 1.5 MiB xxhash-libs x86_64 0:0.8.3-3.fc43 fedora 90.2 KiB xz-libs x86_64 1:5.8.1-4.fc44 fedora 217.8 KiB zig-srpm-macros noarch 0:1-5.fc43 fedora 1.1 KiB zip x86_64 0:3.0-44.fc43 fedora 694.5 KiB zlib-ng-compat x86_64 0:2.3.2-1.fc44 fedora 161.7 KiB zstd x86_64 0:1.5.7-3.fc44 fedora 506.2 KiB Installing groups: Buildsystem building group Transaction Summary: Installing: 180 packages Total size of inbound packages is 67 MiB. Need to download 67 MiB. After this operation, 219 MiB extra will be used (install 219 MiB, remove 0 B). [ 1/180] bzip2-0:1.0.8-21.fc43.x86_64 100% | 3.9 MiB/s | 51.6 KiB | 00m00s [ 2/180] bash-0:5.3.0-2.fc43.x86_64 100% | 89.0 MiB/s | 1.9 MiB | 00m00s [ 3/180] cpio-0:2.15-6.fc43.x86_64 100% | 35.8 MiB/s | 293.1 KiB | 00m00s [ 4/180] fedora-release-common-0:44-0. 100% | 12.0 MiB/s | 24.5 KiB | 00m00s [ 5/180] coreutils-0:9.9-1.fc44.x86_64 100% | 46.4 MiB/s | 1.2 MiB | 00m00s [ 6/180] diffutils-0:3.12-3.fc43.x86_6 100% | 95.8 MiB/s | 392.3 KiB | 00m00s [ 7/180] findutils-1:4.10.0-6.fc43.x86 100% | 107.4 MiB/s | 550.0 KiB | 00m00s [ 8/180] glibc-minimal-langpack-0:2.42 100% | 16.9 MiB/s | 69.1 KiB | 00m00s [ 9/180] grep-0:3.12-2.fc43.x86_64 100% | 48.7 MiB/s | 299.1 KiB | 00m00s [ 10/180] gzip-0:1.14-1.fc44.x86_64 100% | 34.7 MiB/s | 177.7 KiB | 00m00s [ 11/180] info-0:7.2-7.fc44.x86_64 100% | 35.7 MiB/s | 182.9 KiB | 00m00s [ 12/180] patch-0:2.8-2.fc43.x86_64 100% | 37.0 MiB/s | 113.8 KiB | 00m00s [ 13/180] rpm-build-0:6.0.0-1.fc44.x86_ 100% | 67.4 MiB/s | 138.0 KiB | 00m00s [ 14/180] redhat-rpm-config-0:343-16.fc 100% | 25.8 MiB/s | 79.2 KiB | 00m00s [ 15/180] sed-0:4.9-6.fc44.x86_64 100% | 44.2 MiB/s | 317.1 KiB | 00m00s [ 16/180] tar-2:1.35-6.fc43.x86_64 100% | 119.5 MiB/s | 856.4 KiB | 00m00s [ 17/180] shadow-utils-2:4.18.0-7.fc44. 100% | 142.3 MiB/s | 1.3 MiB | 00m00s [ 18/180] which-0:2.23-3.fc43.x86_64 100% | 20.4 MiB/s | 41.7 KiB | 00m00s [ 19/180] unzip-0:6.0-68.fc44.x86_64 100% | 30.0 MiB/s | 184.6 KiB | 00m00s [ 20/180] xz-1:5.8.1-4.fc44.x86_64 100% | 93.2 MiB/s | 572.9 KiB | 00m00s [ 21/180] gawk-0:5.3.2-2.fc43.x86_64 100% | 140.6 MiB/s | 1.1 MiB | 00m00s [ 22/180] util-linux-0:2.41.2-9.fc44.x8 100% | 132.4 MiB/s | 1.2 MiB | 00m00s [ 23/180] filesystem-0:3.18-50.fc43.x86 100% | 111.1 MiB/s | 1.3 MiB | 00m00s [ 24/180] ncurses-libs-0:6.5-8.20250614 100% | 46.5 MiB/s | 333.1 KiB | 00m00s [ 25/180] bzip2-libs-0:1.0.8-21.fc43.x8 100% | 8.4 MiB/s | 43.1 KiB | 00m00s [ 26/180] glibc-0:2.42.9000-15.fc44.x86 100% | 144.7 MiB/s | 2.3 MiB | 00m00s [ 27/180] gmp-1:6.3.0-4.fc44.x86_64 100% | 78.0 MiB/s | 319.3 KiB | 00m00s [ 28/180] coreutils-common-0:9.9-1.fc44 100% | 150.2 MiB/s | 2.1 MiB | 00m00s [ 29/180] libattr-0:2.5.2-6.fc43.x86_64 100% | 3.5 MiB/s | 17.9 KiB | 00m00s [ 30/180] libacl-0:2.3.2-4.fc43.x86_64 100% | 3.4 MiB/s | 24.3 KiB | 00m00s [ 31/180] libcap-0:2.77-1.fc44.x86_64 100% | 21.3 MiB/s | 87.1 KiB | 00m00s [ 32/180] libselinux-0:3.9-5.fc44.x86_6 100% | 19.1 MiB/s | 97.8 KiB | 00m00s [ 33/180] fedora-repos-0:44-0.1.noarch 100% | 4.4 MiB/s | 9.1 KiB | 00m00s [ 34/180] systemd-libs-0:259~rc2-2.fc44 100% | 100.3 MiB/s | 821.6 KiB | 00m00s [ 35/180] openssl-libs-1:3.5.4-1.fc44.x 100% | 163.6 MiB/s | 2.6 MiB | 00m00s [ 36/180] glibc-common-0:2.42.9000-15.f 100% | 38.6 MiB/s | 356.1 KiB | 00m00s [ 37/180] pcre2-0:10.47-1.fc44.x86_64 100% | 37.3 MiB/s | 267.2 KiB | 00m00s [ 38/180] ed-0:1.22.3-1.fc44.x86_64 100% | 13.7 MiB/s | 84.1 KiB | 00m00s [ 39/180] ansible-srpm-macros-0:1-18.1. 100% | 3.2 MiB/s | 19.9 KiB | 00m00s [ 40/180] build-reproducibility-srpm-ma 100% | 4.2 MiB/s | 12.9 KiB | 00m00s [ 41/180] efi-srpm-macros-0:6-5.fc44.no 100% | 11.0 MiB/s | 22.5 KiB | 00m00s [ 42/180] file-0:5.46-8.fc44.x86_64 100% | 23.8 MiB/s | 48.8 KiB | 00m00s [ 43/180] dwz-0:0.16-2.fc43.x86_64 100% | 44.1 MiB/s | 135.5 KiB | 00m00s [ 44/180] filesystem-srpm-macros-0:3.18 100% | 12.9 MiB/s | 26.4 KiB | 00m00s [ 45/180] fonts-srpm-macros-1:5.0.0-1.f 100% | 13.3 MiB/s | 27.3 KiB | 00m00s [ 46/180] forge-srpm-macros-0:0.4.0-3.f 100% | 9.8 MiB/s | 20.1 KiB | 00m00s [ 47/180] gap-srpm-macros-0:2-1.fc44.no 100% | 4.4 MiB/s | 9.1 KiB | 00m00s [ 48/180] fpc-srpm-macros-0:1.3-15.fc43 100% | 3.9 MiB/s | 7.9 KiB | 00m00s [ 49/180] ghc-srpm-macros-0:1.9.2-3.fc4 100% | 8.5 MiB/s | 8.7 KiB | 00m00s [ 50/180] gnat-srpm-macros-0:6-8.fc43.n 100% | 8.3 MiB/s | 8.5 KiB | 00m00s [ 51/180] go-srpm-macros-0:3.8.0-1.fc44 100% | 13.8 MiB/s | 28.3 KiB | 00m00s [ 52/180] java-srpm-macros-0:1-7.fc43.n 100% | 3.9 MiB/s | 7.9 KiB | 00m00s [ 53/180] ocaml-srpm-macros-0:11-2.fc43 100% | 4.5 MiB/s | 9.3 KiB | 00m00s [ 54/180] lua-srpm-macros-0:1-16.fc43.n 100% | 4.3 MiB/s | 8.8 KiB | 00m00s [ 55/180] openblas-srpm-macros-0:2-20.f 100% | 7.4 MiB/s | 7.6 KiB | 00m00s [ 56/180] package-notes-srpm-macros-0:0 100% | 8.8 MiB/s | 9.0 KiB | 00m00s [ 57/180] kernel-srpm-macros-0:1.0-27.f 100% | 1.7 MiB/s | 8.9 KiB | 00m00s [ 58/180] perl-srpm-macros-0:1-60.fc43. 100% | 4.0 MiB/s | 8.3 KiB | 00m00s [ 59/180] pyproject-srpm-macros-0:1.18. 100% | 6.5 MiB/s | 13.3 KiB | 00m00s [ 60/180] python-srpm-macros-0:3.14-9.f 100% | 11.6 MiB/s | 23.8 KiB | 00m00s [ 61/180] qt5-srpm-macros-0:5.15.18-1.f 100% | 4.2 MiB/s | 8.6 KiB | 00m00s [ 62/180] qt6-srpm-macros-0:6.10.1-1.fc 100% | 4.6 MiB/s | 9.4 KiB | 00m00s [ 63/180] rust-srpm-macros-0:28.4-1.fc4 100% | 3.5 MiB/s | 10.9 KiB | 00m00s [ 64/180] tree-sitter-srpm-macros-0:0.4 100% | 6.5 MiB/s | 13.4 KiB | 00m00s [ 65/180] rpm-0:6.0.0-1.fc44.x86_64 100% | 112.6 MiB/s | 576.6 KiB | 00m00s [ 66/180] zig-srpm-macros-0:1-5.fc43.no 100% | 4.1 MiB/s | 8.4 KiB | 00m00s [ 67/180] zip-0:3.0-44.fc43.x86_64 100% | 51.1 MiB/s | 261.6 KiB | 00m00s [ 68/180] debugedit-0:5.2-3.fc44.x86_64 100% | 13.9 MiB/s | 85.6 KiB | 00m00s [ 69/180] elfutils-0:0.194-2.fc44.x86_6 100% | 70.1 MiB/s | 574.6 KiB | 00m00s [ 70/180] elfutils-libelf-0:0.194-2.fc4 100% | 40.0 MiB/s | 204.7 KiB | 00m00s [ 71/180] libarchive-0:3.8.4-1.fc44.x86 100% | 82.6 MiB/s | 422.8 KiB | 00m00s [ 72/180] libgcc-0:15.2.1-4.fc44.x86_64 100% | 43.6 MiB/s | 134.1 KiB | 00m00s [ 73/180] popt-0:1.19-9.fc43.x86_64 100% | 32.1 MiB/s | 65.7 KiB | 00m00s [ 74/180] libstdc++-0:15.2.1-4.fc44.x86 100% | 150.0 MiB/s | 921.3 KiB | 00m00s [ 75/180] readline-0:8.3-2.fc43.x86_64 100% | 54.8 MiB/s | 224.6 KiB | 00m00s [ 76/180] rpm-build-libs-0:6.0.0-1.fc44 100% | 41.6 MiB/s | 127.9 KiB | 00m00s [ 77/180] zstd-0:1.5.7-3.fc44.x86_64 100% | 92.5 MiB/s | 189.5 KiB | 00m00s [ 78/180] audit-libs-0:4.1.2-2.fc44.x86 100% | 67.6 MiB/s | 138.4 KiB | 00m00s 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rpm-sequoia-0:1.9.0-2.fc43.x8 100% | 113.9 MiB/s | 933.3 KiB | 00m00s [118/180] sqlite-libs-0:3.51.0-1.fc44.x 100% | 93.6 MiB/s | 766.5 KiB | 00m00s [119/180] elfutils-default-yama-scope-0 100% | 2.3 MiB/s | 11.8 KiB | 00m00s [120/180] json-c-0:0.18-7.fc43.x86_64 100% | 22.0 MiB/s | 45.0 KiB | 00m00s [121/180] ima-evm-utils-libs-0:1.6.2-7. 100% | 14.4 MiB/s | 29.4 KiB | 00m00s [122/180] libfsverity-0:1.6-3.fc43.x86_ 100% | 6.1 MiB/s | 18.6 KiB | 00m00s [123/180] gpgverify-0:2.2-3.fc43.noarch 100% | 1.8 MiB/s | 11.1 KiB | 00m00s [124/180] gnupg2-0:2.4.8-4.fc43.x86_64 100% | 126.5 MiB/s | 1.6 MiB | 00m00s [125/180] gnupg2-dirmngr-0:2.4.8-4.fc43 100% | 33.5 MiB/s | 274.6 KiB | 00m00s [126/180] gnupg2-gpg-agent-0:2.4.8-4.fc 100% | 38.1 MiB/s | 272.9 KiB | 00m00s [127/180] gnupg2-gpgconf-0:2.4.8-4.fc43 100% | 28.1 MiB/s | 115.0 KiB | 00m00s [128/180] gnupg2-keyboxd-0:2.4.8-4.fc43 100% | 23.1 MiB/s | 94.7 KiB | 00m00s [129/180] libassuan-0:2.5.7-4.fc43.x86_ 100% | 32.9 MiB/s | 67.4 KiB | 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100% | 4.3 MiB/s | 13.3 KiB | 00m00s [156/180] p11-kit-trust-0:0.25.8-1.fc44 100% | 45.5 MiB/s | 139.7 KiB | 00m00s [157/180] systemd-standalone-sysusers-0 100% | 46.6 MiB/s | 143.1 KiB | 00m00s [158/180] xxhash-libs-0:0.8.3-3.fc43.x8 100% | 9.4 MiB/s | 38.5 KiB | 00m00s [159/180] binutils-0:2.45.50-9.fc44.x86 100% | 169.2 MiB/s | 5.9 MiB | 00m00s [160/180] fedora-release-identity-basic 100% | 783.4 KiB/s | 14.1 KiB | 00m00s [161/180] libcurl-0:8.18.0~rc1-1.fc44.x 100% | 30.3 MiB/s | 434.7 KiB | 00m00s [162/180] gdb-minimal-0:16.3-6.fc44.x86 100% | 102.5 MiB/s | 4.4 MiB | 00m00s [163/180] krb5-libs-0:1.21.3-10.fc44.x8 100% | 39.1 MiB/s | 761.1 KiB | 00m00s [164/180] libbrotli-0:1.1.0-10.fc44.x86 100% | 23.7 MiB/s | 339.1 KiB | 00m00s [165/180] libnghttp2-0:1.68.0-2.fc44.x8 100% | 23.7 MiB/s | 72.9 KiB | 00m00s [166/180] libnghttp3-0:1.13.1-1.fc44.x8 100% | 34.3 MiB/s | 70.2 KiB | 00m00s [167/180] libpsl-0:0.21.5-6.fc43.x86_64 100% | 31.7 MiB/s | 65.0 KiB | 00m00s [168/180] libssh-0:0.11.3-1.fc44.x86_64 100% | 75.8 MiB/s | 232.8 KiB | 00m00s [169/180] ngtcp2-crypto-ossl-0:1.18.0-1 100% | 13.0 MiB/s | 26.7 KiB | 00m00s [170/180] ngtcp2-0:1.18.0-1.fc44.x86_64 100% | 35.9 MiB/s | 147.1 KiB | 00m00s [171/180] keyutils-libs-0:1.6.3-6.fc43. 100% | 10.2 MiB/s | 31.4 KiB | 00m00s [172/180] libcom_err-0:1.47.3-3.fc44.x8 100% | 8.8 MiB/s | 26.9 KiB | 00m00s [173/180] libverto-0:0.3.2-11.fc43.x86_ 100% | 6.7 MiB/s | 20.7 KiB | 00m00s [174/180] libssh-config-0:0.11.3-1.fc44 100% | 4.4 MiB/s | 9.1 KiB | 00m00s [175/180] publicsuffix-list-dafsa-0:202 100% | 19.3 MiB/s | 59.2 KiB | 00m00s [176/180] policycoreutils-0:3.9-5.fc44. 100% | 52.4 MiB/s | 214.6 KiB | 00m00s [177/180] selinux-policy-0:42.19-1.fc44 100% | 12.8 MiB/s | 65.4 KiB | 00m00s [178/180] libselinux-utils-0:3.9-5.fc44 100% | 19.4 MiB/s | 119.3 KiB | 00m00s [179/180] rpm-plugin-selinux-0:6.0.0-1. 100% | 3.2 MiB/s | 19.5 KiB | 00m00s [180/180] selinux-policy-targeted-0:42. 100% | 174.4 MiB/s | 6.8 MiB | 00m00s -------------------------------------------------------------------------------- [180/180] Total 100% | 174.3 MiB/s | 66.9 MiB | 00m00s Running transaction Importing OpenPGP key 0x6D9F90A6: UserID : "Fedora (44) " Fingerprint: 36F612DCF27F7D1A48A835E4DBFCF71C6D9F90A6 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-44-primary The key was successfully imported. Importing OpenPGP key 0x6D9F90A6: UserID : "Fedora (44) " Fingerprint: 36F612DCF27F7D1A48A835E4DBFCF71C6D9F90A6 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-44-primary The key was successfully imported. Importing OpenPGP key 0x31645531: UserID : "Fedora (43) " Fingerprint: C6E7F081CF80E13146676E88829B606631645531 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-43-primary The key was successfully imported. Importing OpenPGP key 0xF577861E: UserID : "Fedora (45) " Fingerprint: 4F50A6114CD5C6976A7F1179655A4B02F577861E From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-45-primary The key was successfully imported. [ 1/182] Verify package files 100% | 762.0 B/s | 180.0 B | 00m00s [ 2/182] Prepare transaction 100% | 3.7 KiB/s | 180.0 B | 00m00s [ 3/182] Installing libgcc-0:15.2.1-4. 100% | 262.0 MiB/s | 268.3 KiB | 00m00s [ 4/182] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 5/182] Installing publicsuffix-list- 100% | 0.0 B/s | 69.8 KiB | 00m00s [ 6/182] Installing fedora-release-ide 100% | 0.0 B/s | 920.0 B | 00m00s [ 7/182] Installing fedora-gpg-keys-0: 100% | 58.3 MiB/s | 179.0 KiB | 00m00s [ 8/182] Installing fedora-repos-rawhi 100% | 0.0 B/s | 2.4 KiB | 00m00s [ 9/182] Installing fedora-repos-0:44- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 10/182] Installing fedora-release-com 100% | 24.5 MiB/s | 25.1 KiB | 00m00s [ 11/182] Installing fedora-release-0:4 100% | 17.3 KiB/s | 124.0 B | 00m00s >>> Running sysusers scriptlet: setup-0:2.15.0-27.fc44.noarch >>> Finished sysusers scriptlet: setup-0:2.15.0-27.fc44.noarch >>> Scriptlet output: >>> Creating group 'adm' with GID 4. >>> Creating group 'audio' with GID 63. >>> Creating group 'cdrom' with GID 11. >>> Creating group 'clock' with GID 103. >>> Creating group 'dialout' with GID 18. >>> Creating group 'disk' with GID 6. >>> Creating group 'floppy' with GID 19. >>> Creating group 'ftp' with GID 50. >>> Creating group 'games' with GID 20. >>> Creating group 'input' with GID 104. >>> Creating group 'kmem' with GID 9. >>> Creating group 'kvm' with GID 36. >>> Creating group 'lock' with GID 54. >>> Creating group 'lp' with GID 7. >>> Creating group 'mail' with GID 12. >>> Creating group 'man' with GID 15. >>> Creating group 'mem' with GID 8. >>> Creating group 'nobody' with GID 65534. >>> Creating group 'render' with GID 105. >>> Creating group 'root' with GID 0. >>> Creating group 'sgx' with GID 106. >>> Creating group 'sys' with GID 3. >>> Creating group 'tape' with GID 33. >>> Creating group 'tty' with GID 5. >>> Creating group 'users' with GID 100. >>> Creating group 'utmp' with GID 22. >>> Creating group 'video' with GID 39. >>> Creating group 'wheel' with GID 10. >>> Creating user 'adm' (adm) with UID 3 and GID 4. >>> Creating group 'bin' with GID 1. >>> Creating user 'bin' (bin) with UID 1 and GID 1. >>> Creating group 'daemon' with GID 2. >>> Creating user 'daemon' (daemon) with UID 2 and GID 2. >>> Creating user 'ftp' (FTP User) with UID 14 and GID 50. >>> Creating user 'games' (games) with UID 12 and GID 100. >>> Creating user 'halt' (halt) with UID 7 and GID 0. >>> Creating user 'lp' (lp) with UID 4 and GID 7. >>> Creating user 'mail' (mail) with UID 8 and GID 12. >>> Creating user 'nobody' (Kernel Overflow User) with UID 65534 and GID 65534. >>> Creating user 'operator' (operator) with UID 11 and GID 0. >>> Creating user 'root' (Super User) with UID 0 and GID 0. >>> Creating user 'shutdown' (shutdown) with UID 6 and GID 0. >>> Creating user 'sync' (sync) with UID 5 and GID 0. >>> [ 12/182] Installing setup-0:2.15.0-27. 100% | 54.9 MiB/s | 730.6 KiB | 00m00s >>> [RPM] /etc/hosts created as /etc/hosts.rpmnew [ 13/182] Installing filesystem-0:3.18- 100% | 3.1 MiB/s | 212.8 KiB | 00m00s [ 14/182] Installing pkgconf-m4-0:2.3.0 100% | 0.0 B/s | 14.8 KiB | 00m00s [ 15/182] Installing pcre2-syntax-0:10. 100% | 277.7 MiB/s | 284.3 KiB | 00m00s [ 16/182] Installing gnulib-l10n-0:2024 100% | 215.5 MiB/s | 661.9 KiB | 00m00s [ 17/182] Installing coreutils-common-0 100% | 449.1 MiB/s | 11.2 MiB | 00m00s [ 18/182] Installing ncurses-base-0:6.5 100% | 115.1 MiB/s | 353.5 KiB | 00m00s [ 19/182] Installing bash-0:5.3.0-2.fc4 100% | 312.2 MiB/s | 8.4 MiB | 00m00s [ 20/182] Installing glibc-common-0:2.4 100% | 68.1 MiB/s | 1.0 MiB | 00m00s [ 21/182] Installing glibc-gconv-extra- 100% | 332.5 MiB/s | 7.3 MiB | 00m00s [ 22/182] Installing glibc-0:2.42.9000- 100% | 207.7 MiB/s | 6.9 MiB | 00m00s [ 23/182] Installing ncurses-libs-0:6.5 100% | 310.2 MiB/s | 953.0 KiB | 00m00s [ 24/182] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 25/182] Installing zlib-ng-compat-0:2 100% | 158.7 MiB/s | 162.5 KiB | 00m00s [ 26/182] Installing bzip2-libs-0:1.0.8 100% | 0.0 B/s | 81.7 KiB | 00m00s [ 27/182] Installing libgpg-error-0:1.5 100% | 69.3 MiB/s | 922.5 KiB | 00m00s [ 28/182] Installing libstdc++-0:15.2.1 100% | 406.3 MiB/s | 2.8 MiB | 00m00s [ 29/182] Installing libassuan-0:2.5.7- 100% | 161.7 MiB/s | 165.6 KiB | 00m00s [ 30/182] Installing libgcrypt-0:1.11.2 100% | 394.0 MiB/s | 1.6 MiB | 00m00s [ 31/182] Installing readline-0:8.3-2.f 100% | 501.8 MiB/s | 513.9 KiB | 00m00s [ 32/182] Installing gmp-1:6.3.0-4.fc44 100% | 399.2 MiB/s | 817.5 KiB | 00m00s [ 33/182] Installing xz-libs-1:5.8.1-4. 100% | 213.8 MiB/s | 218.9 KiB | 00m00s [ 34/182] Installing libuuid-0:2.41.2-9 100% | 0.0 B/s | 38.5 KiB | 00m00s [ 35/182] Installing popt-0:1.19-9.fc43 100% | 68.1 MiB/s | 139.4 KiB | 00m00s [ 36/182] Installing libzstd-0:1.5.7-3. 100% | 459.7 MiB/s | 941.6 KiB | 00m00s [ 37/182] Installing elfutils-libelf-0: 100% | 560.5 MiB/s | 1.1 MiB | 00m00s [ 38/182] Installing npth-0:1.8-3.fc43. 100% | 0.0 B/s | 50.7 KiB | 00m00s [ 39/182] Installing libblkid-0:2.41.2- 100% | 257.2 MiB/s | 263.4 KiB | 00m00s [ 40/182] Installing systemd-libs-0:259 100% | 390.1 MiB/s | 2.3 MiB | 00m00s [ 41/182] Installing libxcrypt-0:4.5.2- 100% | 281.3 MiB/s | 288.0 KiB | 00m00s [ 42/182] Installing libsepol-0:3.9-2.f 100% | 401.8 MiB/s | 822.9 KiB | 00m00s [ 43/182] Installing sqlite-libs-0:3.51 100% | 383.0 MiB/s | 1.5 MiB | 00m00s [ 44/182] Installing gnupg2-gpgconf-0:2 100% | 22.4 MiB/s | 252.0 KiB | 00m00s [ 45/182] Installing libattr-0:2.5.2-6. 100% | 0.0 B/s | 25.4 KiB | 00m00s [ 46/182] Installing libacl-0:2.3.2-4.f 100% | 0.0 B/s | 36.8 KiB | 00m00s [ 47/182] Installing pcre2-0:10.47-1.fc 100% | 343.8 MiB/s | 704.1 KiB | 00m00s [ 48/182] Installing libselinux-0:3.9-5 100% | 189.8 MiB/s | 194.4 KiB | 00m00s [ 49/182] Installing grep-0:3.12-2.fc43 100% | 71.6 MiB/s | 1.0 MiB | 00m00s [ 50/182] Installing sed-0:4.9-6.fc44.x 100% | 65.0 MiB/s | 865.5 KiB | 00m00s [ 51/182] Installing findutils-1:4.10.0 100% | 123.9 MiB/s | 1.9 MiB | 00m00s [ 52/182] Installing libtasn1-0:4.20.0- 100% | 173.9 MiB/s | 178.1 KiB | 00m00s [ 53/182] Installing libunistring-0:1.1 100% | 431.7 MiB/s | 1.7 MiB | 00m00s [ 54/182] Installing libidn2-0:2.3.8-2. 100% | 68.2 MiB/s | 558.7 KiB | 00m00s [ 55/182] Installing crypto-policies-0: 100% | 38.5 MiB/s | 157.7 KiB | 00m00s [ 56/182] Installing xz-1:5.8.1-4.fc44. 100% | 83.2 MiB/s | 1.3 MiB | 00m00s [ 57/182] Installing libmount-0:2.41.2- 100% | 365.1 MiB/s | 373.8 KiB | 00m00s [ 58/182] Installing gnupg2-verify-0:2. 100% | 31.1 MiB/s | 349.9 KiB | 00m00s [ 59/182] Installing dwz-0:0.16-2.fc43. 100% | 25.6 MiB/s | 288.5 KiB | 00m00s [ 60/182] Installing mpfr-0:4.2.2-2.fc4 100% | 407.4 MiB/s | 834.4 KiB | 00m00s [ 61/182] Installing gawk-0:5.3.2-2.fc4 100% | 113.5 MiB/s | 1.8 MiB | 00m00s [ 62/182] Installing libksba-0:1.6.7-4. 100% | 391.7 MiB/s | 401.1 KiB | 00m00s [ 63/182] Installing unzip-0:6.0-68.fc4 100% | 35.0 MiB/s | 393.8 KiB | 00m00s [ 64/182] Installing file-libs-0:5.46-8 100% | 741.1 MiB/s | 11.9 MiB | 00m00s [ 65/182] Installing file-0:5.46-8.fc44 100% | 9.0 MiB/s | 101.7 KiB | 00m00s [ 66/182] Installing diffutils-0:3.12-3 100% | 111.5 MiB/s | 1.6 MiB | 00m00s [ 67/182] Installing libeconf-0:0.7.9-2 100% | 0.0 B/s | 66.5 KiB | 00m00s [ 68/182] Installing libcap-ng-0:0.8.5- 100% | 0.0 B/s | 70.8 KiB | 00m00s [ 69/182] Installing audit-libs-0:4.1.2 100% | 372.6 MiB/s | 381.5 KiB | 00m00s [ 70/182] Installing pam-libs-0:1.7.1-3 100% | 126.0 MiB/s | 129.0 KiB | 00m00s [ 71/182] Installing libcap-0:2.77-1.fc 100% | 19.0 MiB/s | 214.3 KiB | 00m00s [ 72/182] Installing libsemanage-0:3.9- 100% | 303.0 MiB/s | 310.2 KiB | 00m00s [ 73/182] Installing libsmartcols-0:2.4 100% | 177.4 MiB/s | 181.6 KiB | 00m00s [ 74/182] Installing lua-libs-0:5.4.8-4 100% | 276.7 MiB/s | 283.3 KiB | 00m00s [ 75/182] Installing json-c-0:0.18-7.fc 100% | 82.0 MiB/s | 84.0 KiB | 00m00s [ 76/182] Installing libffi-0:3.5.2-1.f 100% | 83.2 MiB/s | 85.2 KiB | 00m00s [ 77/182] Installing p11-kit-0:0.25.8-1 100% | 134.7 MiB/s | 2.3 MiB | 00m00s [ 78/182] Installing alternatives-0:1.3 100% | 5.7 MiB/s | 63.8 KiB | 00m00s [ 79/182] Installing p11-kit-trust-0:0. 100% | 24.3 MiB/s | 448.3 KiB | 00m00s [ 80/182] Installing ngtcp2-0:1.18.0-1. 100% | 308.4 MiB/s | 315.8 KiB | 00m00s [ 81/182] Installing openssl-libs-1:3.5 100% | 445.5 MiB/s | 8.9 MiB | 00m00s [ 82/182] Installing coreutils-0:9.9-1. 100% | 189.2 MiB/s | 5.5 MiB | 00m00s [ 83/182] Installing ca-certificates-0: 100% | 2.4 MiB/s | 2.5 MiB | 00m01s [ 84/182] Installing gzip-0:1.14-1.fc44 100% | 30.3 MiB/s | 403.3 KiB | 00m00s [ 85/182] Installing rpm-sequoia-0:1.9. 100% | 413.1 MiB/s | 2.5 MiB | 00m00s [ 86/182] Installing libfsverity-0:1.6- 100% | 0.0 B/s | 29.5 KiB | 00m00s [ 87/182] Installing libevent-0:2.1.12- 100% | 433.0 MiB/s | 886.8 KiB | 00m00s [ 88/182] Installing ngtcp2-crypto-ossl 100% | 51.3 MiB/s | 52.6 KiB | 00m00s [ 89/182] Installing util-linux-core-0: 100% | 92.5 MiB/s | 1.5 MiB | 00m00s [ 90/182] Installing zip-0:3.0-44.fc43. 100% | 56.8 MiB/s | 698.4 KiB | 00m00s [ 91/182] Installing gnupg2-keyboxd-0:2 100% | 33.0 MiB/s | 202.7 KiB | 00m00s [ 92/182] Installing libpsl-0:0.21.5-6. 100% | 75.7 MiB/s | 77.5 KiB | 00m00s [ 93/182] Installing tar-2:1.35-6.fc43. 100% | 155.7 MiB/s | 3.0 MiB | 00m00s [ 94/182] Installing linkdupes-0:0.7.2- 100% | 63.1 MiB/s | 840.1 KiB | 00m00s [ 95/182] Installing libselinux-utils-0 100% | 26.3 MiB/s | 323.4 KiB | 00m00s [ 96/182] Installing liblastlog2-0:2.41 100% | 7.0 MiB/s | 35.9 KiB | 00m00s [ 97/182] Installing systemd-standalone 100% | 23.9 MiB/s | 294.2 KiB | 00m00s [ 98/182] Installing rpm-libs-0:6.0.0-1 100% | 304.5 MiB/s | 935.3 KiB | 00m00s [ 99/182] Installing libusb1-0:1.0.29-4 100% | 24.1 MiB/s | 172.9 KiB | 00m00s >>> Running sysusers scriptlet: tpm2-tss-0:4.1.3-8.fc43.x86_64 >>> Finished sysusers scriptlet: tpm2-tss-0:4.1.3-8.fc43.x86_64 >>> Scriptlet output: >>> Creating group 'tss' with GID 59. >>> Creating user 'tss' (Account used for TPM access) with UID 59 and GID 59. >>> [100/182] Installing tpm2-tss-0:4.1.3-8 100% | 314.4 MiB/s | 1.6 MiB | 00m00s [101/182] Installing ima-evm-utils-libs 100% | 60.5 MiB/s | 62.0 KiB | 00m00s [102/182] Installing gnupg2-gpg-agent-0 100% | 36.6 MiB/s | 675.4 KiB | 00m00s [103/182] Installing libfdisk-0:2.41.2- 100% | 186.3 MiB/s | 381.5 KiB | 00m00s [104/182] Installing util-linux-0:2.41. 100% | 111.7 MiB/s | 3.6 MiB | 00m00s [105/182] Installing policycoreutils-0: 100% | 31.6 MiB/s | 711.8 KiB | 00m00s [106/182] Installing selinux-policy-0:4 100% | 1.8 MiB/s | 33.6 KiB | 00m00s [107/182] Installing selinux-policy-tar 100% | 219.3 MiB/s | 14.9 MiB | 00m00s [108/182] Installing zstd-0:1.5.7-3.fc4 100% | 35.6 MiB/s | 509.8 KiB | 00m00s [109/182] Installing libxml2-0:2.12.10- 100% | 113.6 MiB/s | 1.7 MiB | 00m00s [110/182] Installing nettle-0:3.10.1-2. 100% | 387.5 MiB/s | 793.7 KiB | 00m00s [111/182] Installing gnutls-0:3.8.11-6. 100% | 405.4 MiB/s | 3.6 MiB | 00m00s [112/182] Installing bzip2-0:1.0.8-21.f 100% | 8.9 MiB/s | 99.8 KiB | 00m00s [113/182] Installing add-determinism-0: 100% | 144.1 MiB/s | 2.3 MiB | 00m00s [114/182] Installing build-reproducibil 100% | 0.0 B/s | 1.5 KiB | 00m00s [115/182] Installing cpio-0:2.15-6.fc43 100% | 78.5 MiB/s | 1.1 MiB | 00m00s [116/182] Installing ed-0:1.22.3-1.fc44 100% | 13.4 MiB/s | 151.2 KiB | 00m00s [117/182] Installing patch-0:2.8-2.fc43 100% | 19.9 MiB/s | 224.3 KiB | 00m00s [118/182] Installing lz4-libs-0:1.10.0- 100% | 158.6 MiB/s | 162.5 KiB | 00m00s [119/182] Installing libarchive-0:3.8.4 100% | 311.6 MiB/s | 957.2 KiB | 00m00s [120/182] Installing libgomp-0:15.2.1-4 100% | 530.2 MiB/s | 543.0 KiB | 00m00s [121/182] Installing libtool-ltdl-0:2.5 100% | 0.0 B/s | 71.2 KiB | 00m00s [122/182] Installing gdbm-libs-1:1.23-1 100% | 128.5 MiB/s | 131.6 KiB | 00m00s [123/182] Installing cyrus-sasl-lib-0:2 100% | 143.7 MiB/s | 2.3 MiB | 00m00s [124/182] Installing openldap-0:2.6.10- 100% | 324.0 MiB/s | 663.6 KiB | 00m00s [125/182] Installing gnupg2-dirmngr-0:2 100% | 33.7 MiB/s | 621.1 KiB | 00m00s [126/182] Installing gnupg2-0:2.4.8-4.f 100% | 252.0 MiB/s | 6.6 MiB | 00m00s [127/182] Installing rpm-sign-libs-0:6. 100% | 0.0 B/s | 40.6 KiB | 00m00s [128/182] Installing gpgverify-0:2.2-3. 100% | 0.0 B/s | 9.4 KiB | 00m00s [129/182] Installing jansson-0:2.14-3.f 100% | 88.3 MiB/s | 90.5 KiB | 00m00s [130/182] Installing libpkgconf-0:2.3.0 100% | 77.4 MiB/s | 79.2 KiB | 00m00s [131/182] Installing pkgconf-0:2.3.0-3. 100% | 8.1 MiB/s | 91.0 KiB | 00m00s [132/182] Installing pkgconf-pkg-config 100% | 177.3 KiB/s | 1.8 KiB | 00m00s [133/182] Installing xxhash-libs-0:0.8. 100% | 0.0 B/s | 91.6 KiB | 00m00s [134/182] Installing libbrotli-0:1.1.0- 100% | 408.0 MiB/s | 835.6 KiB | 00m00s [135/182] Installing libnghttp2-0:1.68. 100% | 159.5 MiB/s | 163.4 KiB | 00m00s [136/182] Installing libnghttp3-0:1.13. 100% | 153.0 MiB/s | 156.7 KiB | 00m00s [137/182] Installing keyutils-libs-0:1. 100% | 0.0 B/s | 55.7 KiB | 00m00s [138/182] Installing libcom_err-0:1.47. 100% | 0.0 B/s | 64.2 KiB | 00m00s [139/182] Installing libverto-0:0.3.2-1 100% | 26.6 MiB/s | 27.2 KiB | 00m00s [140/182] Installing krb5-libs-0:1.21.3 100% | 328.5 MiB/s | 2.3 MiB | 00m00s [141/182] Installing libssh-0:0.11.3-1. 100% | 277.9 MiB/s | 569.2 KiB | 00m00s [142/182] Installing libcurl-0:8.18.0~r 100% | 319.7 MiB/s | 982.1 KiB | 00m00s [143/182] Installing curl-0:8.18.0~rc1- 100% | 24.1 MiB/s | 469.6 KiB | 00m00s [144/182] Installing rpm-0:6.0.0-1.fc44 100% | 88.8 MiB/s | 2.6 MiB | 00m00s [145/182] Installing efi-srpm-macros-0: 100% | 0.0 B/s | 41.2 KiB | 00m00s [146/182] Installing java-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [147/182] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [148/182] Installing tree-sitter-srpm-m 100% | 0.0 B/s | 9.3 KiB | 00m00s [149/182] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [150/182] Installing filesystem-srpm-ma 100% | 0.0 B/s | 38.9 KiB | 00m00s [151/182] Installing elfutils-default-y 100% | 510.7 KiB/s | 2.0 KiB | 00m00s [152/182] Installing elfutils-libs-0:0. 100% | 224.4 MiB/s | 689.3 KiB | 00m00s [153/182] Installing elfutils-debuginfo 100% | 7.0 MiB/s | 86.3 KiB | 00m00s [154/182] Installing elfutils-0:0.194-2 100% | 172.4 MiB/s | 2.9 MiB | 00m00s [155/182] Installing binutils-0:2.45.50 100% | 375.9 MiB/s | 27.1 MiB | 00m00s [156/182] Installing gdb-minimal-0:16.3 100% | 323.3 MiB/s | 13.3 MiB | 00m00s [157/182] Installing debugedit-0:5.2-3. 100% | 17.7 MiB/s | 217.3 KiB | 00m00s [158/182] Installing rpm-build-libs-0:6 100% | 262.9 MiB/s | 269.2 KiB | 00m00s [159/182] Installing rust-srpm-macros-0 100% | 0.0 B/s | 6.4 KiB | 00m00s [160/182] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 740.0 B | 00m00s [161/182] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [162/182] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [163/182] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [164/182] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [165/182] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.1 KiB | 00m00s [166/182] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [167/182] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [168/182] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [169/182] Installing gap-srpm-macros-0: 100% | 0.0 B/s | 2.7 KiB | 00m00s [170/182] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [171/182] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [172/182] Installing redhat-rpm-config- 100% | 185.4 MiB/s | 189.9 KiB | 00m00s [173/182] Installing forge-srpm-macros- 100% | 0.0 B/s | 40.3 KiB | 00m00s [174/182] Installing fonts-srpm-macros- 100% | 0.0 B/s | 57.0 KiB | 00m00s [175/182] Installing go-srpm-macros-0:3 100% | 61.6 MiB/s | 63.0 KiB | 00m00s [176/182] Installing rpm-build-0:6.0.0- 100% | 17.0 MiB/s | 296.5 KiB | 00m00s [177/182] Installing pyproject-srpm-mac 100% | 0.0 B/s | 2.5 KiB | 00m00s [178/182] Installing python-srpm-macros 100% | 0.0 B/s | 52.9 KiB | 00m00s [179/182] Installing rpm-plugin-selinux 100% | 0.0 B/s | 13.0 KiB | 00m00s [180/182] Installing which-0:2.23-3.fc4 100% | 7.0 MiB/s | 85.7 KiB | 00m00s [181/182] Installing shadow-utils-2:4.1 100% | 158.9 MiB/s | 4.0 MiB | 00m00s [182/182] Installing info-0:7.2-7.fc44. 100% | 56.7 KiB/s | 358.3 KiB | 00m06s Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.7.2-2.fc44.x86_64 alternatives-1.33-3.fc44.x86_64 ansible-srpm-macros-1-18.1.fc43.noarch audit-libs-4.1.2-2.fc44.x86_64 bash-5.3.0-2.fc43.x86_64 binutils-2.45.50-9.fc44.x86_64 build-reproducibility-srpm-macros-0.7.2-2.fc44.noarch bzip2-1.0.8-21.fc43.x86_64 bzip2-libs-1.0.8-21.fc43.x86_64 ca-certificates-2025.2.80_v9.0.304-2.fc44.noarch coreutils-9.9-1.fc44.x86_64 coreutils-common-9.9-1.fc44.x86_64 cpio-2.15-6.fc43.x86_64 crypto-policies-20251128-1.git19878fe.fc44.noarch curl-8.18.0~rc1-1.fc44.x86_64 cyrus-sasl-lib-2.1.28-33.fc44.x86_64 debugedit-5.2-3.fc44.x86_64 diffutils-3.12-3.fc43.x86_64 dwz-0.16-2.fc43.x86_64 ed-1.22.3-1.fc44.x86_64 efi-srpm-macros-6-5.fc44.noarch elfutils-0.194-2.fc44.x86_64 elfutils-debuginfod-client-0.194-2.fc44.x86_64 elfutils-default-yama-scope-0.194-2.fc44.noarch elfutils-libelf-0.194-2.fc44.x86_64 elfutils-libs-0.194-2.fc44.x86_64 fedora-gpg-keys-44-0.1.noarch fedora-release-44-0.8.noarch fedora-release-common-44-0.8.noarch fedora-release-identity-basic-44-0.8.noarch fedora-repos-44-0.1.noarch fedora-repos-rawhide-44-0.1.noarch file-5.46-8.fc44.x86_64 file-libs-5.46-8.fc44.x86_64 filesystem-3.18-50.fc43.x86_64 filesystem-srpm-macros-3.18-50.fc43.noarch findutils-4.10.0-6.fc43.x86_64 fonts-srpm-macros-5.0.0-1.fc44.noarch forge-srpm-macros-0.4.0-3.fc43.noarch fpc-srpm-macros-1.3-15.fc43.noarch gap-srpm-macros-2-1.fc44.noarch gawk-5.3.2-2.fc43.x86_64 gdb-minimal-16.3-6.fc44.x86_64 gdbm-libs-1.23-10.fc43.x86_64 ghc-srpm-macros-1.9.2-3.fc43.noarch glibc-2.42.9000-15.fc44.x86_64 glibc-common-2.42.9000-15.fc44.x86_64 glibc-gconv-extra-2.42.9000-15.fc44.x86_64 glibc-minimal-langpack-2.42.9000-15.fc44.x86_64 gmp-6.3.0-4.fc44.x86_64 gnat-srpm-macros-6-8.fc43.noarch gnulib-l10n-20241231-1.fc44.noarch gnupg2-2.4.8-4.fc43.x86_64 gnupg2-dirmngr-2.4.8-4.fc43.x86_64 gnupg2-gpg-agent-2.4.8-4.fc43.x86_64 gnupg2-gpgconf-2.4.8-4.fc43.x86_64 gnupg2-keyboxd-2.4.8-4.fc43.x86_64 gnupg2-verify-2.4.8-4.fc43.x86_64 gnutls-3.8.11-6.fc44.x86_64 go-srpm-macros-3.8.0-1.fc44.noarch gpg-pubkey-36f612dcf27f7d1a48a835e4dbfcf71c6d9f90a6-6786af3b gpg-pubkey-4f50a6114cd5c6976a7f1179655a4b02f577861e-6888bc98 gpg-pubkey-c6e7f081cf80e13146676e88829b606631645531-66b6dccf gpgverify-2.2-3.fc43.noarch grep-3.12-2.fc43.x86_64 gzip-1.14-1.fc44.x86_64 ima-evm-utils-libs-1.6.2-7.fc44.x86_64 info-7.2-7.fc44.x86_64 jansson-2.14-3.fc43.x86_64 java-srpm-macros-1-7.fc43.noarch json-c-0.18-7.fc43.x86_64 kernel-srpm-macros-1.0-27.fc43.noarch keyutils-libs-1.6.3-6.fc43.x86_64 krb5-libs-1.21.3-10.fc44.x86_64 libacl-2.3.2-4.fc43.x86_64 libarchive-3.8.4-1.fc44.x86_64 libassuan-2.5.7-4.fc43.x86_64 libattr-2.5.2-6.fc43.x86_64 libblkid-2.41.2-9.fc44.x86_64 libbrotli-1.1.0-10.fc44.x86_64 libcap-2.77-1.fc44.x86_64 libcap-ng-0.8.5-8.fc44.x86_64 libcom_err-1.47.3-3.fc44.x86_64 libcurl-8.18.0~rc1-1.fc44.x86_64 libeconf-0.7.9-2.fc43.x86_64 libevent-2.1.12-16.fc43.x86_64 libfdisk-2.41.2-9.fc44.x86_64 libffi-3.5.2-1.fc44.x86_64 libfsverity-1.6-3.fc43.x86_64 libgcc-15.2.1-4.fc44.x86_64 libgcrypt-1.11.2-1.fc44.x86_64 libgomp-15.2.1-4.fc44.x86_64 libgpg-error-1.56-1.fc44.x86_64 libidn2-2.3.8-2.fc43.x86_64 libksba-1.6.7-4.fc43.x86_64 liblastlog2-2.41.2-9.fc44.x86_64 libmount-2.41.2-9.fc44.x86_64 libnghttp2-1.68.0-2.fc44.x86_64 libnghttp3-1.13.1-1.fc44.x86_64 libpkgconf-2.3.0-3.fc43.x86_64 libpsl-0.21.5-6.fc43.x86_64 libselinux-3.9-5.fc44.x86_64 libselinux-utils-3.9-5.fc44.x86_64 libsemanage-3.9-4.fc44.x86_64 libsepol-3.9-2.fc43.x86_64 libsmartcols-2.41.2-9.fc44.x86_64 libssh-0.11.3-1.fc44.x86_64 libssh-config-0.11.3-1.fc44.noarch libstdc++-15.2.1-4.fc44.x86_64 libtasn1-4.20.0-2.fc43.x86_64 libtool-ltdl-2.5.4-8.fc44.x86_64 libunistring-1.1-10.fc43.x86_64 libusb1-1.0.29-4.fc44.x86_64 libuuid-2.41.2-9.fc44.x86_64 libverto-0.3.2-11.fc43.x86_64 libxcrypt-4.5.2-1.fc44.x86_64 libxml2-2.12.10-5.fc44.x86_64 libzstd-1.5.7-3.fc44.x86_64 linkdupes-0.7.2-2.fc44.x86_64 lua-libs-5.4.8-4.fc44.x86_64 lua-srpm-macros-1-16.fc43.noarch lz4-libs-1.10.0-3.fc43.x86_64 mpfr-4.2.2-2.fc43.x86_64 ncurses-base-6.5-8.20250614.fc44.noarch ncurses-libs-6.5-8.20250614.fc44.x86_64 nettle-3.10.1-2.fc43.x86_64 ngtcp2-1.18.0-1.fc44.x86_64 ngtcp2-crypto-ossl-1.18.0-1.fc44.x86_64 npth-1.8-3.fc43.x86_64 ocaml-srpm-macros-11-2.fc43.noarch openblas-srpm-macros-2-20.fc43.noarch openldap-2.6.10-4.fc44.x86_64 openssl-libs-3.5.4-1.fc44.x86_64 p11-kit-0.25.8-1.fc44.x86_64 p11-kit-trust-0.25.8-1.fc44.x86_64 package-notes-srpm-macros-0.5-14.fc43.noarch pam-libs-1.7.1-3.fc43.x86_64 patch-2.8-2.fc43.x86_64 pcre2-10.47-1.fc44.x86_64 pcre2-syntax-10.47-1.fc44.noarch perl-srpm-macros-1-60.fc43.noarch pkgconf-2.3.0-3.fc43.x86_64 pkgconf-m4-2.3.0-3.fc43.noarch pkgconf-pkg-config-2.3.0-3.fc43.x86_64 policycoreutils-3.9-5.fc44.x86_64 popt-1.19-9.fc43.x86_64 publicsuffix-list-dafsa-20250616-2.fc43.noarch pyproject-srpm-macros-1.18.6-1.fc44.noarch python-srpm-macros-3.14-9.fc44.noarch qt5-srpm-macros-5.15.18-1.fc44.noarch qt6-srpm-macros-6.10.1-1.fc44.noarch readline-8.3-2.fc43.x86_64 redhat-rpm-config-343-16.fc44.noarch rpm-6.0.0-1.fc44.x86_64 rpm-build-6.0.0-1.fc44.x86_64 rpm-build-libs-6.0.0-1.fc44.x86_64 rpm-libs-6.0.0-1.fc44.x86_64 rpm-plugin-selinux-6.0.0-1.fc44.x86_64 rpm-sequoia-1.9.0-2.fc43.x86_64 rpm-sign-libs-6.0.0-1.fc44.x86_64 rust-srpm-macros-28.4-1.fc44.noarch sed-4.9-6.fc44.x86_64 selinux-policy-42.19-1.fc44.noarch selinux-policy-targeted-42.19-1.fc44.noarch setup-2.15.0-27.fc44.noarch shadow-utils-4.18.0-7.fc44.x86_64 sqlite-libs-3.51.0-1.fc44.x86_64 systemd-libs-259~rc2-2.fc44.x86_64 systemd-standalone-sysusers-259~rc2-2.fc44.x86_64 tar-1.35-6.fc43.x86_64 tpm2-tss-4.1.3-8.fc43.x86_64 tree-sitter-srpm-macros-0.4.2-1.fc43.noarch unzip-6.0-68.fc44.x86_64 util-linux-2.41.2-9.fc44.x86_64 util-linux-core-2.41.2-9.fc44.x86_64 which-2.23-3.fc43.x86_64 xxhash-libs-0.8.3-3.fc43.x86_64 xz-5.8.1-4.fc44.x86_64 xz-libs-5.8.1-4.fc44.x86_64 zig-srpm-macros-1-5.fc43.noarch zip-3.0-44.fc43.x86_64 zlib-ng-compat-2.3.2-1.fc44.x86_64 zstd-1.5.7-3.fc44.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1765411200 Wrote: /builddir/build/SRPMS/bout++-5.2.0-4.fc44.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1765453338.506648/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-k2tkz64z/bout++/bout++.spec) Config(child) 0 minutes 25 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/bout++-5.2.0-4.fc44.src.rpm) Config(fedora-rawhide-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1765453338.506648/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1765453338.506648/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1765453338.506648/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-6.0.0-1.fc44.x86_64 rpm-sequoia-1.9.0-2.fc43.x86_64 dnf5-5.3.0.0-3.fc44.x86_64 dnf5-plugins-5.3.0.0-3.fc44.x86_64 Finish: chroot init Start: build phase for bout++-5.2.0-4.fc44.src.rpm Start: build setup for bout++-5.2.0-4.fc44.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1765411200 Wrote: /builddir/build/SRPMS/bout++-5.2.0-4.fc44.src.rpm Updating and loading repositories: Copr repository 100% | 195.0 KiB/s | 2.1 KiB | 00m00s fedora 100% | 58.4 KiB/s | 42.8 KiB | 00m01s >>> Curl error (56): Failure when receiving data from the peer for https://mirrors.fedoraproject.org/metalink?repo=rawhide&arch=x86_64 [Recv failure: Connection reset by peer] - https://mirrors.fedoraproject.org/metalink?repo=rawhide&arch=x86_64 Repositories loaded. Package Arch Version Repository Size Installing: chrpath x86_64 0:0.16-26.fc43 fedora 58.4 KiB cmake x86_64 0:3.31.6-4.fc43 fedora 34.5 MiB doxygen x86_64 2:1.15.0-1.fc44 fedora 19.9 MiB environment-modules x86_64 0:5.6.1-1.fc44 fedora 1.9 MiB fftw-devel x86_64 0:3.3.10-16.fc44 fedora 284.2 KiB flexiblas-devel x86_64 0:3.5.0-1.fc44 fedora 5.9 MiB fmt-devel x86_64 0:11.2.0-3.fc43 fedora 570.1 KiB gcc-c++ x86_64 0:15.2.1-4.fc44 fedora 41.4 MiB gettext-devel x86_64 0:0.26-1.fc44 fedora 1.3 MiB hdf5-devel x86_64 0:1.14.6-6.fc43 fedora 3.3 MiB hdf5-mpich-devel x86_64 0:1.14.6-6.fc43 fedora 3.2 MiB hdf5-openmpi-devel x86_64 0:1.14.6-6.fc43 fedora 3.2 MiB m4 x86_64 0:1.4.20-3.fc44 fedora 847.9 KiB make x86_64 1:4.4.1-11.fc43 fedora 1.8 MiB mpark-variant-devel x86_64 0:1.4.0-15.fc43 fedora 117.2 KiB mpich-devel x86_64 0:4.2.2-6.fc43 fedora 2.0 MiB netcdf-cxx4-devel x86_64 0:4.3.1-21.fc44 fedora 459.1 KiB netcdf-devel x86_64 0:4.9.3-1.fc44 fedora 397.7 KiB openmpi-devel x86_64 0:5.0.9-1.fc44 fedora 3.1 MiB petsc-mpich-devel x86_64 0:3.24.2-2.fc44 fedora 16.0 MiB petsc-openmpi-devel x86_64 0:3.24.2-2.fc44 fedora 16.5 MiB python3 x86_64 0:3.14.2-1.fc44 fedora 28.9 KiB python3-boutdata noarch 0:0.3.0-6.fc44 fedora 1.2 MiB python3-cython x86_64 0:3.2.1-1.fc44 fedora 19.0 MiB python3-devel x86_64 0:3.14.2-1.fc44 fedora 1.9 MiB python3-jinja2 noarch 0:3.1.6-6.fc44 fedora 3.1 MiB python3-netcdf4 x86_64 0:1.7.3-1.fc44 fedora 2.3 MiB python3-numpy x86_64 1:2.3.5-1.fc44 fedora 41.4 MiB python3-scipy x86_64 0:1.16.2-2.fc44 fedora 64.0 MiB python3-sphinx noarch 1:8.2.3-16.fc44 fedora 12.3 MiB python3-tables x86_64 0:3.10.2-6.fc44 fedora 10.2 MiB python3-zoidberg noarch 0:0.2.2-1.fc44 copr_base 826.5 KiB sundials-devel x86_64 0:7.5.0-1.fc44 fedora 28.7 MiB sundials-mpich-devel x86_64 0:7.5.0-1.fc44 fedora 29.7 MiB sundials-openmpi-devel x86_64 0:7.5.0-1.fc44 fedora 29.8 MiB zlib-ng-compat-devel x86_64 0:2.3.2-1.fc44 fedora 107.0 KiB Installing dependencies: MUMPS-common noarch 0:5.7.3-5.fc44 fedora 988.4 KiB MUMPS-mpich x86_64 0:5.7.3-5.fc44 fedora 9.7 MiB MUMPS-openmpi x86_64 0:5.7.3-5.fc44 fedora 9.7 MiB SuperLUMT-common noarch 0:4.0.1-6.fc43 fedora 679.2 KiB SuperLUMT64-double x86_64 0:4.0.1-6.fc43 fedora 157.1 KiB abattis-cantarell-vf-fonts noarch 0:0.301-15.fc43 fedora 192.7 KiB adobe-mappings-cmap noarch 0:20231115-3.fc43 fedora 15.2 MiB adobe-mappings-cmap-deprecated noarch 0:20231115-3.fc43 fedora 582.1 KiB adobe-mappings-pdf noarch 0:20190401-10.fc43 fedora 4.4 MiB annobin-docs noarch 0:13.03-1.fc44 fedora 99.2 KiB annobin-plugin-gcc x86_64 0:13.03-1.fc44 fedora 695.8 KiB avahi-libs x86_64 0:0.9~rc2-6.fc43 fedora 171.6 KiB blosc x86_64 0:1.21.6-7.fc43 fedora 126.2 KiB blosc2 x86_64 0:2.21.3-1.fc44 fedora 567.2 KiB brotli x86_64 0:1.1.0-10.fc44 fedora 31.6 KiB brotli-devel x86_64 0:1.1.0-10.fc44 fedora 65.6 KiB bubblewrap x86_64 0:0.11.0-2.fc43 fedora 135.0 KiB cairo x86_64 0:1.18.4-2.fc43 fedora 1.8 MiB cairo-gobject x86_64 0:1.18.4-2.fc43 fedora 31.1 KiB clang-libs x86_64 0:21.1.7-1.fc44 fedora 114.9 MiB clang-resource-filesystem x86_64 0:21.1.7-1.fc44 fedora 15.3 KiB cmake-data noarch 0:3.31.6-4.fc43 fedora 8.5 MiB cmake-filesystem x86_64 0:3.31.6-4.fc43 fedora 0.0 B cmake-rpm-macros noarch 0:3.31.6-4.fc43 fedora 7.7 KiB cpp x86_64 0:15.2.1-4.fc44 fedora 37.9 MiB cups-filesystem noarch 1:2.4.16-3.fc44 fedora 0.0 B cups-libs x86_64 1:2.4.16-3.fc44 fedora 618.7 KiB dbus-libs x86_64 1:1.16.0-4.fc43 fedora 345.5 KiB default-fonts-core-sans noarch 0:4.2-5.fc43 fedora 11.9 KiB dejavu-sans-fonts noarch 0:2.37-27.fc44 fedora 5.5 MiB emacs-filesystem x86_64 1:30.2-1.fc44 fedora 0.0 B expat x86_64 0:2.7.3-1.fc44 fedora 301.1 KiB fftw x86_64 0:3.3.10-16.fc44 fedora 182.0 KiB fftw-libs x86_64 0:3.3.10-16.fc44 fedora 0.0 B fftw-libs-double x86_64 0:3.3.10-16.fc44 fedora 3.4 MiB fftw-libs-long x86_64 0:3.3.10-16.fc44 fedora 1.5 MiB fftw-libs-quad x86_64 0:3.3.10-16.fc44 fedora 2.5 MiB fftw-libs-single x86_64 0:3.3.10-16.fc44 fedora 3.6 MiB 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gettext-runtime x86_64 0:0.26-1.fc44 fedora 708.1 KiB glib2 x86_64 0:2.87.0-1.fc44 fedora 14.9 MiB glibc-devel x86_64 0:2.42.9000-15.fc44 fedora 2.3 MiB glycin-libs x86_64 0:2.0.4-1.fc44 fedora 4.4 MiB glycin-loaders x86_64 0:2.0.4-1.fc44 fedora 13.1 MiB google-droid-sans-fonts noarch 0:20200215-23.fc43 fedora 6.3 MiB google-noto-fonts-common noarch 0:20251201-1.fc44 fedora 17.7 KiB google-noto-sans-vf-fonts noarch 0:20251201-1.fc44 fedora 1.4 MiB gpgme x86_64 0:1.24.3-6.fc44 fedora 587.9 KiB gpgmepp x86_64 0:1.24.3-6.fc44 fedora 429.2 KiB graphite2 x86_64 0:1.3.14-19.fc43 fedora 191.8 KiB graphviz x86_64 0:14.0.2-2.fc44 fedora 3.9 MiB graphviz-libs x86_64 0:14.0.2-2.fc44 fedora 1.2 MiB groff-base x86_64 0:1.23.0-11.fc44 fedora 3.8 MiB gts x86_64 0:0.7.6-51.20121130.fc43 fedora 636.6 KiB harfbuzz x86_64 0:12.2.0-1.fc44 fedora 2.9 MiB hdf-libs x86_64 0:4.3.0-4.fc43 fedora 687.2 KiB hdf5 x86_64 0:1.14.6-6.fc43 fedora 6.4 MiB hdf5-mpich x86_64 0:1.14.6-6.fc43 fedora 6.3 MiB hdf5-openmpi x86_64 0:1.14.6-6.fc43 fedora 6.3 MiB highway x86_64 0:1.3.0-1.fc44 fedora 5.5 MiB hwloc-libs x86_64 0:2.12.0-2.fc43 fedora 2.9 MiB hypre-mpich x86_64 0:2.32.0-7.fc44 fedora 5.4 MiB hypre-openmpi x86_64 0:2.32.0-7.fc44 fedora 5.4 MiB jbig2dec-libs x86_64 0:0.20-7.fc43 fedora 164.9 KiB jbigkit-libs x86_64 0:2.1-32.fc43 fedora 113.5 KiB js-doxygen noarch 2:1.15.0-1.fc44 fedora 375.0 KiB jsoncpp x86_64 0:1.9.6-2.fc43 fedora 257.6 KiB kernel-headers x86_64 0:6.18.0-65.fc44 fedora 6.8 MiB keyutils-libs-devel x86_64 0:1.6.3-6.fc43 fedora 48.2 KiB krb5-devel x86_64 0:1.21.3-10.fc44 fedora 705.9 KiB lasi x86_64 0:1.1.3-17.fc43 fedora 126.7 KiB lcms2 x86_64 0:2.16-6.fc43 fedora 433.7 KiB less x86_64 0:685-6.fc44 fedora 448.6 KiB libICE x86_64 0:1.1.2-3.fc43 fedora 194.4 KiB libSM x86_64 0:1.2.5-3.fc43 fedora 101.0 KiB libX11 x86_64 0:1.8.12-1.fc43 fedora 1.3 MiB libX11-common noarch 0:1.8.12-1.fc43 fedora 1.2 MiB libXau x86_64 0:1.0.12-3.fc43 fedora 72.9 KiB libXext x86_64 0:1.3.6-4.fc43 fedora 90.0 KiB libXft x86_64 0:2.3.8-9.fc43 fedora 164.4 KiB libXpm x86_64 0:3.5.17-6.fc43 fedora 148.3 KiB libXrender x86_64 0:0.9.12-3.fc43 fedora 46.0 KiB libXt x86_64 0:1.3.1-3.fc43 fedora 429.8 KiB libaec x86_64 0:1.1.4-3.fc44 fedora 90.4 KiB libaec-devel x86_64 0:1.1.4-3.fc44 fedora 24.2 KiB libaom x86_64 0:3.13.1-2.fc44 fedora 5.0 MiB libavif x86_64 0:1.3.0-2.fc44 fedora 258.0 KiB libcbor x86_64 0:0.13.0-1.fc44 fedora 79.4 KiB libcom_err-devel x86_64 0:1.47.3-3.fc44 fedora 16.7 KiB libcurl-devel x86_64 0:8.18.0~rc1-1.fc44 fedora 1.4 MiB libdatrie x86_64 0:0.2.14-1.fc44 fedora 53.8 KiB libdav1d x86_64 0:1.5.2-1.fc44 fedora 1.7 MiB libedit x86_64 0:3.1-57.20251016cvs.fc44 fedora 240.2 KiB libfabric x86_64 0:2.3.1-1.fc44 fedora 9.0 MiB libfido2 x86_64 0:1.16.0-4.fc44 fedora 238.5 KiB libgfortran x86_64 0:15.2.1-4.fc44 fedora 3.4 MiB libgs x86_64 0:10.06.0-1.fc44 fedora 24.4 MiB libheif x86_64 0:1.20.2-10.fc44 fedora 1.6 MiB libibverbs x86_64 0:60.0-1.fc44 fedora 1.2 MiB libidn2-devel 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x86_64 0:3.24.2-2.fc44 fedora 25.3 MiB pixman x86_64 0:0.46.2-2.fc43 fedora 710.3 KiB pmix x86_64 0:5.0.7-2.fc43 fedora 2.2 MiB poppler x86_64 0:25.07.0-3.fc44 fedora 3.8 MiB poppler-data noarch 0:0.4.11-10.fc43 fedora 12.3 MiB poppler-glib x86_64 0:25.07.0-3.fc44 fedora 633.9 KiB procps-ng x86_64 0:4.0.4-9.fc44 fedora 1.0 MiB prrte x86_64 0:3.0.6-8.fc43 fedora 158.3 KiB prrte-libs x86_64 0:3.0.6-8.fc43 fedora 1.7 MiB ptscotch-mpich x86_64 0:7.0.10-1.fc44 fedora 1.1 MiB ptscotch-openmpi x86_64 0:7.0.10-1.fc44 fedora 1.1 MiB publicsuffix-list noarch 0:20250616-2.fc43 fedora 332.8 KiB pyproject-rpm-macros noarch 0:1.18.6-1.fc44 fedora 115.6 KiB python-pip-wheel noarch 0:25.3-1.fc44 fedora 1.2 MiB python-rpm-macros noarch 0:3.14-9.fc44 fedora 27.6 KiB python3-babel noarch 0:2.17.0-6.fc44 fedora 30.3 MiB python3-blosc2 x86_64 0:3.8.0-4.fc44 fedora 2.1 MiB python3-cairo x86_64 0:1.28.0-4.fc44 fedora 492.9 KiB python3-certifi noarch 0:2025.07.09-3.fc44 fedora 7.4 KiB python3-cftime x86_64 0:1.6.5-1.fc44 fedora 2.9 MiB python3-charset-normalizer noarch 0:3.4.4-1.fc44 fedora 356.2 KiB python3-contourpy x86_64 0:1.3.3-3.fc44 fedora 856.7 KiB python3-cpuinfo noarch 0:9.0.0-16.fc44 fedora 310.7 KiB python3-cycler noarch 0:0.11.0-19.fc44 fedora 37.8 KiB python3-dateutil noarch 1:2.9.0.post0-6.fc44 fedora 877.5 KiB python3-docutils noarch 0:0.21.2-6.fc44 fedora 5.0 MiB python3-fonttools x86_64 0:4.61.0-1.fc44 fedora 19.2 MiB python3-fortranformat noarch 0:2.0.3-1.fc44 copr_base 183.9 KiB python3-freeqdsk noarch 0:0.5.2-1.fc44 copr_base 160.4 KiB python3-idna noarch 0:3.11-1.fc44 fedora 738.4 KiB python3-imagesize noarch 0:1.4.1-14.fc44 fedora 36.0 KiB python3-kiwisolver x86_64 0:1.4.9-3.fc44 fedora 154.0 KiB python3-libs x86_64 0:3.14.2-1.fc44 fedora 43.1 MiB python3-markupsafe x86_64 0:3.0.2-6.fc44 fedora 61.5 KiB python3-matplotlib x86_64 0:3.10.6-1.fc44 fedora 31.6 MiB python3-matplotlib-data-fonts x86_64 0:3.10.6-1.fc44 fedora 7.9 MiB python3-mpmath noarch 0:1.3.0-16.fc44 fedora 5.3 MiB python3-msgpack x86_64 0:1.1.2-1.fc44 fedora 319.8 KiB python3-natsort noarch 0:8.4.0-8.fc44 fedora 264.4 KiB python3-ndindex x86_64 0:1.10.0-5.fc44 fedora 1.1 MiB python3-numexpr x86_64 0:2.12.1-2.fc44 fedora 819.0 KiB python3-numpy-f2py x86_64 1:2.3.5-1.fc44 fedora 2.1 MiB python3-olefile noarch 0:0.47-11.fc44 fedora 346.5 KiB python3-packaging noarch 0:25.0-7.fc44 fedora 607.4 KiB python3-pillow x86_64 0:12.0.0-1.fc44 fedora 4.2 MiB python3-platformdirs noarch 0:4.4.0-2.fc44 fedora 182.4 KiB python3-pooch noarch 0:1.8.2-9.fc44 fedora 635.2 KiB python3-pygments noarch 0:2.19.1-7.fc44 fedora 11.3 MiB python3-pyparsing noarch 0:3.1.2-14.fc44 fedora 1.0 MiB python3-requests noarch 0:2.32.5-2.fc44 fedora 476.9 KiB python3-roman-numerals-py noarch 0:3.1.0-5.fc44 fedora 40.4 KiB python3-rpm-generators noarch 0:14-13.fc43 fedora 81.7 KiB python3-rpm-macros noarch 0:3.14-9.fc44 fedora 6.5 KiB python3-six noarch 0:1.17.0-7.fc44 fedora 118.0 KiB python3-snowballstemmer noarch 0:3.0.1-8.fc44 fedora 1.8 MiB python3-sphinx-theme-alabaster noarch 0:0.7.16-11.fc44 fedora 42.0 KiB python3-sympy noarch 0:1.14.0-8.fc44 fedora 84.3 MiB python3-typing-extensions noarch 0:4.15.0-2.fc44 fedora 538.4 KiB python3-urllib3 noarch 0:2.5.0-4.fc44 fedora 1.1 MiB rav1e-libs x86_64 0:0.7.1-8.fc43 fedora 3.0 MiB rdma-core-common noarch 0:60.0-1.fc44 fedora 21.9 KiB rhash x86_64 0:1.4.5-3.fc43 fedora 351.1 KiB rpm-mpi-hooks noarch 0:8-12.fc43 fedora 8.7 KiB scalapack-common x86_64 0:2.2.2-5.fc43 fedora 27.5 KiB scalapack-mpich x86_64 0:2.2.2-5.fc43 fedora 5.6 MiB scalapack-openmpi x86_64 0:2.2.2-5.fc43 fedora 5.6 MiB shared-mime-info x86_64 0:2.4-2.fc43 fedora 5.2 MiB snappy x86_64 0:1.2.2-3.fc44 fedora 71.8 KiB spdlog x86_64 0:1.15.3-3.fc43 fedora 360.1 KiB suitesparse x86_64 0:7.11.0-1.fc43 fedora 45.5 MiB suitesparse64 x86_64 0:7.11.0-1.fc43 fedora 45.5 MiB sundials x86_64 0:7.5.0-1.fc44 fedora 4.0 MiB sundials-mpich x86_64 0:7.5.0-1.fc44 fedora 4.3 MiB sundials-openmpi x86_64 0:7.5.0-1.fc44 fedora 4.3 MiB superlu_dist-mpich x86_64 1:8.2.0-10.fc43 fedora 1.4 MiB superlu_dist-openmpi x86_64 1:8.2.0-10.fc43 fedora 1.4 MiB svt-av1-libs x86_64 0:3.1.2-1.fc44 fedora 5.6 MiB tcl x86_64 1:9.0.2-1.fc44 fedora 4.3 MiB tzdata noarch 0:2025b-3.fc43 fedora 1.6 MiB ucx x86_64 0:1.18.1-3.fc44 fedora 2.4 MiB urw-base35-bookman-fonts noarch 0:20200910-26.fc43 fedora 1.4 MiB urw-base35-c059-fonts noarch 0:20200910-26.fc43 fedora 1.4 MiB urw-base35-d050000l-fonts noarch 0:20200910-26.fc43 fedora 84.3 KiB urw-base35-fonts noarch 0:20200910-26.fc43 fedora 5.3 KiB urw-base35-fonts-common noarch 0:20200910-26.fc43 fedora 37.4 KiB urw-base35-gothic-fonts noarch 0:20200910-26.fc43 fedora 1.2 MiB urw-base35-nimbus-mono-ps-fonts noarch 0:20200910-26.fc43 fedora 1.0 MiB urw-base35-nimbus-roman-fonts noarch 0:20200910-26.fc43 fedora 1.4 MiB urw-base35-nimbus-sans-fonts noarch 0:20200910-26.fc43 fedora 2.4 MiB urw-base35-p052-fonts noarch 0:20200910-26.fc43 fedora 1.5 MiB urw-base35-standard-symbols-ps-fonts noarch 0:20200910-26.fc43 fedora 64.9 KiB urw-base35-z003-fonts noarch 0:20200910-26.fc43 fedora 390.8 KiB vim-filesystem noarch 2:9.1.1952-1.fc44 fedora 40.0 B web-assets-filesystem noarch 0:5-24.fc43 fedora 34.0 B xapian-core-libs x86_64 0:1.4.29-3.fc43 fedora 2.1 MiB xml-common noarch 0:0.6.3-67.fc43 fedora 78.4 KiB yaksa x86_64 0:0.3-8.fc43 fedora 43.8 MiB zlib-ng x86_64 0:2.3.2-1.fc44 fedora 182.0 KiB Transaction Summary: Installing: 386 packages Total size of inbound packages is 505 MiB. Need to download 505 MiB. After this operation, 2 GiB extra will be used (install 2 GiB, remove 0 B). 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187.6 KiB | 00m00s [316/386] adobe-mappings-cmap-deprecate 100% | 50.0 MiB/s | 102.5 KiB | 00m00s [317/386] adobe-mappings-cmap-0:2023111 100% | 224.0 MiB/s | 2.2 MiB | 00m00s [318/386] cups-libs-1:2.4.16-3.fc44.x86 100% | 23.2 MiB/s | 261.6 KiB | 00m00s [319/386] jbig2dec-libs-0:0.20-7.fc43.x 100% | 18.1 MiB/s | 74.0 KiB | 00m00s [320/386] libXt-0:1.3.1-3.fc43.x86_64 100% | 58.3 MiB/s | 179.2 KiB | 00m00s [321/386] adobe-mappings-pdf-0:20190401 100% | 24.2 MiB/s | 619.3 KiB | 00m00s [322/386] google-droid-sans-fonts-0:202 100% | 135.1 MiB/s | 2.7 MiB | 00m00s [323/386] libpaper-1:2.1.1-9.fc43.x86_6 100% | 8.7 MiB/s | 26.6 KiB | 00m00s [324/386] libijs-0:0.35-25.fc43.x86_64 100% | 3.6 MiB/s | 29.1 KiB | 00m00s [325/386] cairo-gobject-0:1.18.4-2.fc43 100% | 8.3 MiB/s | 16.9 KiB | 00m00s [326/386] libdav1d-0:1.5.2-1.fc44.x86_6 100% | 155.6 MiB/s | 637.5 KiB | 00m00s [327/386] libthai-0:0.1.29-11.fc43.x86_ 100% | 68.5 MiB/s | 210.3 KiB | 00m00s [328/386] libXft-0:2.3.8-9.fc43.x86_64 100% | 11.8 MiB/s | 72.2 KiB | 00m00s [329/386] poppler-0:25.07.0-3.fc44.x86_ 100% | 145.1 MiB/s | 1.3 MiB | 00m00s [330/386] urw-base35-c059-fonts-0:20200 100% | 142.1 MiB/s | 872.9 KiB | 00m00s [331/386] urw-base35-d050000l-fonts-0:2 100% | 36.7 MiB/s | 75.2 KiB | 00m00s [332/386] urw-base35-fonts-common-0:202 100% | 5.0 MiB/s | 20.6 KiB | 00m00s [333/386] urw-base35-gothic-fonts-0:202 100% | 89.4 MiB/s | 640.8 KiB | 00m00s [334/386] urw-base35-nimbus-mono-ps-fon 100% | 129.2 MiB/s | 793.8 KiB | 00m00s [335/386] urw-base35-nimbus-roman-fonts 100% | 92.6 MiB/s | 853.1 KiB | 00m00s [336/386] urw-base35-nimbus-sans-fonts- 100% | 92.9 MiB/s | 1.3 MiB | 00m00s [337/386] urw-base35-p052-fonts-0:20200 100% | 94.9 MiB/s | 972.1 KiB | 00m00s [338/386] urw-base35-standard-symbols-p 100% | 11.3 MiB/s | 57.7 KiB | 00m00s [339/386] urw-base35-z003-fonts-0:20200 100% | 67.1 MiB/s | 274.9 KiB | 00m00s [340/386] urw-base35-bookman-fonts-0:20 100% | 16.2 MiB/s | 845.2 KiB | 00m00s [341/386] libaom-0:3.13.1-2.fc44.x86_64 100% | 142.7 MiB/s | 1.9 MiB | 00m00s [342/386] libyuv-0:0-0.57.20240704git96 100% | 14.1 MiB/s | 202.1 KiB | 00m00s [343/386] rav1e-libs-0:0.7.1-8.fc43.x86 100% | 51.7 MiB/s | 1.0 MiB | 00m00s [344/386] svt-av1-libs-0:3.1.2-1.fc44.x 100% | 83.2 MiB/s | 2.0 MiB | 00m00s [345/386] libseccomp-0:2.6.0-2.fc43.x86 100% | 12.3 MiB/s | 75.7 KiB | 00m00s [346/386] glycin-loaders-0:2.0.4-1.fc44 100% | 108.8 MiB/s | 2.8 MiB | 00m00s [347/386] avahi-libs-0:0.9~rc2-6.fc43.x 100% | 13.5 MiB/s | 69.0 KiB | 00m00s [348/386] libICE-0:1.1.2-3.fc43.x86_64 100% | 38.2 MiB/s | 78.1 KiB | 00m00s [349/386] cups-filesystem-1:2.4.16-3.fc 100% | 1.6 MiB/s | 13.1 KiB | 00m00s [350/386] libdatrie-0:0.2.14-1.fc44.x86 100% | 15.7 MiB/s | 32.1 KiB | 00m00s [351/386] libSM-0:1.2.5-3.fc43.x86_64 100% | 7.2 MiB/s | 44.2 KiB | 00m00s [352/386] gpgmepp-0:1.24.3-6.fc44.x86_6 100% | 34.9 MiB/s | 142.9 KiB | 00m00s [353/386] nspr-0:4.38.2-1.fc44.x86_64 100% | 33.7 MiB/s | 138.2 KiB | 00m00s 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KiB | 00m00s [367/386] highway-0:1.3.0-1.fc44.x86_64 100% | 96.9 MiB/s | 694.5 KiB | 00m00s [368/386] nss-softokn-freebl-0:3.119.0- 100% | 28.0 MiB/s | 372.5 KiB | 00m00s [369/386] python3-fortranformat-0:2.0.3 100% | 4.2 MiB/s | 60.4 KiB | 00m00s [370/386] python3-freeqdsk-0:0.5.2-1.fc 100% | 2.9 MiB/s | 54.3 KiB | 00m00s [371/386] pcre2-devel-0:10.47-1.fc44.x8 100% | 53.8 MiB/s | 550.9 KiB | 00m00s [372/386] pcre2-utf16-0:10.47-1.fc44.x8 100% | 60.1 MiB/s | 246.1 KiB | 00m00s [373/386] pcre2-utf32-0:10.47-1.fc44.x8 100% | 28.4 MiB/s | 232.9 KiB | 00m00s [374/386] libtirpc-0:1.3.7-1.fc44.x86_6 100% | 15.5 MiB/s | 95.1 KiB | 00m00s [375/386] kernel-headers-0:6.18.0-65.fc 100% | 107.0 MiB/s | 1.7 MiB | 00m00s [376/386] annobin-plugin-gcc-0:13.03-1. 100% | 111.1 MiB/s | 682.8 KiB | 00m00s [377/386] gcc-plugin-annobin-0:15.2.1-4 100% | 19.0 MiB/s | 58.4 KiB | 00m00s [378/386] annobin-docs-0:13.03-1.fc44.n 100% | 17.5 MiB/s | 89.4 KiB | 00m00s [379/386] js-doxygen-2:1.15.0-1.fc44.no 100% | 17.8 MiB/s | 109.5 KiB | 00m00s [380/386] hdf-libs-0:4.3.0-4.fc43.x86_6 100% | 10.2 MiB/s | 291.3 KiB | 00m00s [381/386] pyproject-rpm-macros-0:1.18.6 100% | 10.9 MiB/s | 44.6 KiB | 00m00s [382/386] web-assets-filesystem-0:5-24. 100% | 1.3 MiB/s | 7.7 KiB | 00m00s [383/386] python3-rpm-generators-0:14-1 100% | 7.0 MiB/s | 28.5 KiB | 00m00s [384/386] python-rpm-macros-0:3.14-9.fc 100% | 4.8 MiB/s | 19.6 KiB | 00m00s [385/386] python3-rpm-macros-0:3.14-9.f 100% | 4.0 MiB/s | 12.2 KiB | 00m00s [386/386] cmake-rpm-macros-0:3.31.6-4.f 100% | 3.6 MiB/s | 14.8 KiB | 00m00s -------------------------------------------------------------------------------- [386/386] Total 100% | 165.9 MiB/s | 504.5 MiB | 00m03s Running transaction [ 1/388] Verify package files 100% | 233.0 B/s | 386.0 B | 00m02s [ 2/388] Prepare transaction 100% | 1.8 KiB/s | 386.0 B | 00m00s [ 3/388] Installing libgfortran-0:15.2 100% | 372.8 MiB/s | 3.4 MiB | 00m00s [ 4/388] Installing glib2-0:2.87.0-1.f 100% | 324.2 MiB/s | 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106.0 MiB/s | 108.6 KiB | 00m00s [ 18/388] Installing openjpeg-0:2.5.4-1 100% | 223.8 MiB/s | 458.3 KiB | 00m00s [ 19/388] Installing lcms2-0:2.16-6.fc4 100% | 425.1 MiB/s | 435.3 KiB | 00m00s [ 20/388] Installing libmpc-0:1.3.1-8.f 100% | 158.3 MiB/s | 162.1 KiB | 00m00s [ 21/388] Installing expat-0:2.7.3-1.fc 100% | 24.7 MiB/s | 303.2 KiB | 00m00s [ 22/388] Installing libaec-devel-0:1.1 100% | 0.0 B/s | 25.6 KiB | 00m00s [ 23/388] Installing hdf5-0:1.14.6-6.fc 100% | 236.4 MiB/s | 6.4 MiB | 00m00s [ 24/388] Installing python-rpm-macros- 100% | 0.0 B/s | 28.5 KiB | 00m00s [ 25/388] Installing libdav1d-0:1.5.2-1 100% | 423.3 MiB/s | 1.7 MiB | 00m00s [ 26/388] Installing openblas-0:0.3.29- 100% | 110.8 MiB/s | 113.5 KiB | 00m00s [ 27/388] Installing libnl3-0:3.12.0-2. 100% | 349.1 MiB/s | 1.0 MiB | 00m00s [ 28/388] Installing fmt-0:11.2.0-3.fc4 100% | 262.0 MiB/s | 268.3 KiB | 00m00s [ 29/388] Installing python3-rpm-macros 100% | 0.0 B/s | 6.8 KiB | 00m00s [ 30/388] Installing fftw-libs-quad-0:3 100% | 415.6 MiB/s | 2.5 MiB | 00m00s [ 31/388] Installing scalapack-common-0 100% | 28.3 MiB/s | 29.0 KiB | 00m00s [ 32/388] Installing shared-mime-info-0 100% | 112.6 MiB/s | 2.6 MiB | 00m00s [ 33/388] Installing libICE-0:1.1.2-3.f 100% | 191.2 MiB/s | 195.8 KiB | 00m00s [ 34/388] Installing svt-av1-libs-0:3.1 100% | 397.8 MiB/s | 5.6 MiB | 00m00s [ 35/388] Installing rav1e-libs-0:0.7.1 100% | 374.0 MiB/s | 3.0 MiB | 00m00s [ 36/388] Installing adobe-mappings-cma 100% | 379.8 MiB/s | 15.2 MiB | 00m00s [ 37/388] Installing openssl-devel-1:3. 100% | 77.7 MiB/s | 5.6 MiB | 00m00s [ 38/388] Installing ngtcp2-devel-0:1.1 100% | 291.1 MiB/s | 298.1 KiB | 00m00s [ 39/388] Installing fribidi-0:1.0.16-3 100% | 15.7 MiB/s | 192.8 KiB | 00m00s [ 40/388] Installing libimagequant-0:4. 100% | 346.2 MiB/s | 709.0 KiB | 00m00s [ 41/388] Installing rdma-core-common-0 100% | 0.0 B/s | 23.2 KiB | 00m00s [ 42/388] Installing libibverbs-0:60.0- 100% | 295.3 MiB/s | 1.2 MiB | 00m00s [ 43/388] Installing MUMPS-common-0:5.7 100% | 966.2 MiB/s | 989.4 KiB | 00m00s [ 44/388] Installing numactl-libs-0:2.0 100% | 0.0 B/s | 57.8 KiB | 00m00s [ 45/388] Installing libpsm2-0:12.0.1-3 100% | 86.6 MiB/s | 443.4 KiB | 00m00s [ 46/388] Installing tzdata-0:2025b-3.f 100% | 72.8 MiB/s | 1.9 MiB | 00m00s [ 47/388] Installing libtextstyle-0:0.2 100% | 195.6 MiB/s | 200.3 KiB | 00m00s [ 48/388] Installing gettext-libs-0:0.2 100% | 371.7 MiB/s | 2.2 MiB | 00m00s [ 49/388] Installing fftw-libs-single-0 100% | 449.9 MiB/s | 3.6 MiB | 00m00s [ 50/388] Installing fftw-libs-long-0:3 100% | 384.1 MiB/s | 1.5 MiB | 00m00s [ 51/388] Installing fftw-libs-double-0 100% | 262.2 MiB/s | 3.4 MiB | 00m00s [ 52/388] Installing groff-base-0:1.23. 100% | 132.6 MiB/s | 3.8 MiB | 00m00s [ 53/388] Installing libedit-0:3.1-57.2 100% | 236.2 MiB/s | 241.8 KiB | 00m00s [ 54/388] Installing lzo-0:2.10-15.fc43 100% | 176.3 MiB/s | 180.5 KiB | 00m00s [ 55/388] Installing vim-filesystem-2:9 100% | 0.0 B/s | 4.7 KiB | 00m00s [ 56/388] Installing less-0:685-6.fc44. 100% | 34.0 MiB/s | 452.2 KiB | 00m00s [ 57/388] Installing emacs-filesystem-1 100% | 0.0 B/s | 812.0 B | 00m00s [ 58/388] Installing make-1:4.4.1-11.fc 100% | 112.5 MiB/s | 1.8 MiB | 00m00s [ 59/388] Installing fftw-0:3.3.10-16.f 100% | 16.4 MiB/s | 184.9 KiB | 00m00s [ 60/388] Installing fftw-libs-0:3.3.10 100% | 0.0 B/s | 124.0 B | 00m00s [ 61/388] Installing orangefs-0:2.10.1- 100% | 101.3 MiB/s | 1.7 MiB | 00m00s [ 62/388] Installing librdmacm-0:60.0-1 100% | 148.5 MiB/s | 152.1 KiB | 00m00s [ 63/388] Installing libfabric-0:2.3.1- 100% | 322.2 MiB/s | 9.0 MiB | 00m00s [ 64/388] Installing ngtcp2-crypto-ossl 100% | 0.0 B/s | 8.1 KiB | 00m00s [ 65/388] Installing adobe-mappings-cma 100% | 285.7 MiB/s | 585.2 KiB | 00m00s [ 66/388] Installing libSM-0:1.2.5-3.fc 100% | 100.0 MiB/s | 102.4 KiB | 00m00s [ 67/388] Installing pyproject-rpm-macr 100% | 114.8 MiB/s | 117.5 KiB | 00m00s [ 68/388] Installing spdlog-0:1.15.3-3. 100% | 353.1 MiB/s | 361.5 KiB | 00m00s [ 69/388] Installing openblas-openmp-0: 100% | 682.6 MiB/s | 43.7 MiB | 00m00s [ 70/388] Installing flexiblas-netlib-0 100% | 358.9 MiB/s | 16.5 MiB | 00m00s [ 71/388] Installing flexiblas-0:3.5.0- 100% | 0.0 B/s | 39.2 KiB | 00m00s [ 72/388] Installing flexiblas-openblas 100% | 39.1 MiB/s | 40.1 KiB | 00m00s [ 73/388] Installing suitesparse-0:7.11 100% | 554.7 MiB/s | 45.5 MiB | 00m00s [ 74/388] Installing openblas-serial-0: 100% | 680.6 MiB/s | 41.5 MiB | 00m00s [ 75/388] Installing suitesparse64-0:7. 100% | 554.7 MiB/s | 45.5 MiB | 00m00s [ 76/388] Installing openblas-openmp64- 100% | 684.8 MiB/s | 43.8 MiB | 00m00s [ 77/388] Installing flexiblas-openblas 100% | 0.0 B/s | 40.1 KiB | 00m00s [ 78/388] Installing flexiblas-netlib64 100% | 370.9 MiB/s | 16.7 MiB | 00m00s [ 79/388] Installing graphviz-libs-0:14 100% | 307.3 MiB/s | 1.2 MiB | 00m00s [ 80/388] Installing cpp-0:15.2.1-4.fc4 100% | 391.3 MiB/s | 38.0 MiB | 00m00s [ 81/388] Installing nss-softokn-freebl 100% | 323.2 MiB/s | 992.9 KiB | 00m00s [ 82/388] Installing nss-softokn-0:3.11 100% | 492.2 MiB/s | 2.0 MiB | 00m00s [ 83/388] Installing nss-0:3.119.0-1.fc 100% | 210.3 MiB/s | 1.9 MiB | 00m00s [ 84/388] Installing nss-sysinit-0:3.11 100% | 1.6 MiB/s | 19.2 KiB | 00m00s [ 85/388] Installing urw-base35-bookman 100% | 455.0 MiB/s | 1.4 MiB | 00m00s [ 86/388] Installing urw-base35-c059-fo 100% | 465.1 MiB/s | 1.4 MiB | 00m00s [ 87/388] Installing urw-base35-d050000 100% | 0.0 B/s | 85.4 KiB | 00m00s [ 88/388] Installing urw-base35-gothic- 100% | 387.6 MiB/s | 1.2 MiB | 00m00s [ 89/388] Installing urw-base35-nimbus- 100% | 525.9 MiB/s | 1.1 MiB | 00m00s [ 90/388] Installing urw-base35-nimbus- 100% | 455.3 MiB/s | 1.4 MiB | 00m00s [ 91/388] Installing urw-base35-nimbus- 100% | 478.8 MiB/s | 2.4 MiB | 00m00s [ 92/388] Installing urw-base35-p052-fo 100% | 495.8 MiB/s | 1.5 MiB | 00m00s [ 93/388] Installing urw-base35-standar 100% | 0.0 B/s | 66.0 KiB | 00m00s [ 94/388] Installing urw-base35-z003-fo 100% | 382.6 MiB/s | 391.8 KiB | 00m00s [ 95/388] Installing urw-base35-fonts-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [ 96/388] Installing dejavu-sans-fonts- 100% | 459.1 MiB/s | 5.5 MiB | 00m00s [ 97/388] Installing abattis-cantarell- 100% | 189.9 MiB/s | 194.4 KiB | 00m00s [ 98/388] Installing google-droid-sans- 100% | 417.3 MiB/s | 6.3 MiB | 00m00s [ 99/388] Installing web-assets-filesys 100% | 0.0 B/s | 856.0 B | 00m00s [100/388] Installing js-doxygen-2:1.15. 100% | 368.0 MiB/s | 376.9 KiB | 00m00s [101/388] Installing libyuv-0:0-0.57.20 100% | 332.7 MiB/s | 681.3 KiB | 00m00s [102/388] Installing libssh-devel-0:0.1 100% | 176.3 MiB/s | 180.6 KiB | 00m00s [103/388] Installing annobin-docs-0:13. 100% | 0.0 B/s | 100.3 KiB | 00m00s [104/388] Installing libtirpc-0:1.3.7-1 100% | 197.7 MiB/s | 202.4 KiB | 00m00s [105/388] Installing hdf-libs-0:4.3.0-4 100% | 168.0 MiB/s | 688.3 KiB | 00m00s [106/388] Installing kernel-headers-0:6 100% | 239.3 MiB/s | 6.9 MiB | 00m00s [107/388] Installing glibc-devel-0:2.42 100% | 197.6 MiB/s | 2.4 MiB | 00m00s [108/388] Installing libxcrypt-devel-0: 100% | 32.5 MiB/s | 33.3 KiB | 00m00s [109/388] Installing gcc-0:15.2.1-4.fc4 100% | 442.7 MiB/s | 112.0 MiB | 00m00s [110/388] Installing libquadmath-devel- 100% | 23.1 MiB/s | 23.6 KiB | 00m00s [111/388] Installing gcc-gfortran-0:15. 100% | 383.8 MiB/s | 40.3 MiB | 00m00s [112/388] Installing hdf5-devel-0:1.14. 100% | 185.6 MiB/s | 3.3 MiB | 00m00s [113/388] Installing pcre2-utf32-0:10.4 100% | 298.8 MiB/s | 611.9 KiB | 00m00s [114/388] Installing pcre2-utf16-0:10.4 100% | 312.5 MiB/s | 640.0 KiB | 00m00s [115/388] Installing pcre2-devel-0:10.4 100% | 117.7 MiB/s | 2.1 MiB | 00m00s [116/388] Installing highway-0:1.3.0-1. 100% | 615.0 MiB/s | 5.5 MiB | 00m00s [117/388] Installing libjxl-1:0.11.1-7. 100% | 456.7 MiB/s | 4.1 MiB | 00m00s [118/388] Installing noopenh264-0:2.6.0 100% | 0.0 B/s | 40.7 KiB | 00m00s [119/388] Installing libopenjph-0:0.25. 100% | 460.3 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59.6 MiB/s | 854.4 KiB | 00m00s [388/388] Installing chrpath-0:0.16-26. 100% | 128.1 KiB/s | 60.2 KiB | 00m00s Warning: skipped OpenPGP checks for 3 packages from repository: copr_base Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1765411200 Wrote: /builddir/build/SRPMS/bout++-5.2.0-4.fc44.src.rpm Updating and loading repositories: Copr repository 100% | 107.3 KiB/s | 2.1 KiB | 00m00s fedora 100% | 66.2 KiB/s | 27.0 KiB | 00m00s Repositories loaded. Nothing to do. Package "chrpath-0.16-26.fc43.x86_64" is already installed. Package "cmake-3.31.6-4.fc43.x86_64" is already installed. Package "doxygen-2:1.15.0-1.fc44.x86_64" is already installed. Package "environment-modules-5.6.1-1.fc44.x86_64" is already installed. Package "fftw-devel-3.3.10-16.fc44.x86_64" is already installed. Package "flexiblas-devel-3.5.0-1.fc44.x86_64" is already installed. Package "fmt-devel-11.2.0-3.fc43.x86_64" is already installed. Package "gcc-c++-15.2.1-4.fc44.x86_64" is already installed. Package "gettext-devel-0.26-1.fc44.x86_64" is already installed. Package "hdf5-devel-1.14.6-6.fc43.x86_64" is already installed. Package "hdf5-mpich-devel-1.14.6-6.fc43.x86_64" is already installed. Package "hdf5-openmpi-devel-1.14.6-6.fc43.x86_64" is already installed. Package "m4-1.4.20-3.fc44.x86_64" is already installed. Package "make-1:4.4.1-11.fc43.x86_64" is already installed. Package "mpark-variant-devel-1.4.0-15.fc43.x86_64" is already installed. Package "mpich-devel-4.2.2-6.fc43.x86_64" is already installed. Package "netcdf-cxx4-devel-4.3.1-21.fc44.x86_64" is already installed. Package "netcdf-devel-4.9.3-1.fc44.x86_64" is already installed. Package "openmpi-devel-5.0.9-1.fc44.x86_64" is already installed. Package "petsc-mpich-devel-3.24.2-2.fc44.x86_64" is already installed. Package "petsc-openmpi-devel-3.24.2-2.fc44.x86_64" is already installed. Package "python3-3.14.2-1.fc44.x86_64" is already installed. Package "python3-boutdata-0.3.0-6.fc44.noarch" is already installed. Package "python3-boutdata-0.3.0-6.fc44.noarch" is already installed. Package "python3-cython-3.2.1-1.fc44.x86_64" is already installed. Package "python3-devel-3.14.2-1.fc44.x86_64" is already installed. Package "python3-jinja2-3.1.6-6.fc44.noarch" is already installed. Package "python3-netcdf4-1.7.3-1.fc44.x86_64" is already installed. Package "python3-numpy-1:2.3.5-1.fc44.x86_64" is already installed. Package "python3-scipy-1.16.2-2.fc44.x86_64" is already installed. Package "python3-sphinx-1:8.2.3-16.fc44.noarch" is already installed. Package "python3-tables-3.10.2-6.fc44.x86_64" is already installed. Package "python3-zoidberg-0.2.2-1.fc44.noarch" is already installed. Package "sundials-devel-7.5.0-1.fc44.x86_64" is already installed. Package "sundials-mpich-devel-7.5.0-1.fc44.x86_64" is already installed. Package "sundials-openmpi-devel-7.5.0-1.fc44.x86_64" is already installed. Package "zlib-ng-compat-devel-2.3.2-1.fc44.x86_64" is already installed. Finish: build setup for bout++-5.2.0-4.fc44.src.rpm Start: rpmbuild bout++-5.2.0-4.fc44.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1765411200 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.jkyZN1 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.qy0dnD + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0-build + cd /builddir/build/BUILD/bout++-5.2.0-build + rm -rf BOUT++-v5.2.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/BOUT++-v5.2.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd BOUT++-v5.2.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/3188.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + sed -e 's/html_theme = "sphinx_book_theme"/html_theme = "sphinxdoc"/' -i manual/sphinx/conf.py + rm -rf externalpackages/mpark.variant/ + mkdir -p externalpackages/mpark.variant/include/ + rm -rf tools/pylib/boutdata + rm -rf tools/pylib/boututils ++ find -L tools/pylib/ -type f ++ grep -v _boutcore_build + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/boutconfig/__init__.py.in + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/boutconfig/__init__.py.cin + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/setup.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/scan_enums.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/resolve_enum_inv.pyx.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/resolve_enum.pxd.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/other_enums.hxx + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/helper.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/helper.h.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/helper.cxx.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/geninput.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/generate.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/debug_setup.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/debug_helper.hxx + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutpp_openmpi_compat.hxx + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutpp.pyx.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutpp.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutexception_helper.hxx + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutexception_helper.cxx + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutcpp.pxd.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/bout_options.pxd + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/backend.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/Makefile + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/GENERATION.md + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/CMakeLists.txt + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/.gitignore + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/README.md + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/Makefile + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/.gitignore + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.83GZSw + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BOUT++-v5.2.0 + export CC=mpicc + CC=mpicc + export CXX=mpicxx + CXX=mpicxx + for mpi in openmpi mpich + mkdir build_openmpi + for mpi in openmpi mpich + mkdir build_mpich + for mpi in openmpi mpich + '[' openmpi = mpich ']' + '[' openmpi = openmpi ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/openmpi-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/openmpi-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-x86_64 + eval $'MPI_COMPILER=\'openmpi-x86_64\'; export MPI_COMPILER;\nLD_LIBRARY_PATH=\'/usr/lib64/openmpi/lib\'; export LD_LIBRARY_PATH;\nMPI_MAN=\'/usr/share/man/openmpi-x86_64\'; export MPI_MAN;\nMANPATH=\'/usr/share/man/openmpi-x86_64:/usr/share/man:\'; export MANPATH;\nMPI_INCLUDE=\'/usr/include/openmpi-x86_64\'; export MPI_INCLUDE;\n_LMFILES_=\'/usr/share/modulefiles/mpi/openmpi-x86_64\'; export _LMFILES_;\nLOADEDMODULES=\'mpi/openmpi-x86_64\'; export LOADEDMODULES;\nCMAKE_PREFIX_PATH=\'/usr/lib64/openmpi\'; export CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\'/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nMPI_PYTHON3_SITEARCH=\'/usr/lib64/python3.14/site-packages/openmpi\'; export MPI_PYTHON3_SITEARCH;\nMPI_HOME=\'/usr/lib64/openmpi\'; export MPI_HOME;\nMPI_FORTRAN_MOD_DIR=\'/usr/lib64/gfortran/modules/openmpi\'; export MPI_FORTRAN_MOD_DIR;\n__MODULES_LMALTNAME=\'mpi/openmpi-x86_64&as|mpi/default&as|mpi/latest\'; export __MODULES_LMALTNAME;\n__MODULES_LMCONFLICT=\'mpi/openmpi-x86_64&mpi\'; export __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':2\'; export __MODULES_SHARE_MANPATH;\nMPI_SUFFIX=\'_openmpi\'; export MPI_SUFFIX;\nMPI_SYSCONFIG=\'/etc/openmpi-x86_64\'; export MPI_SYSCONFIG;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nMPI_LIB=\'/usr/lib64/openmpi/lib\'; export MPI_LIB;\nPATH=\'/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nMPI_BIN=\'/usr/lib64/openmpi/bin\'; export MPI_BIN;\ntest 0;' ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ CMAKE_PREFIX_PATH=/usr/lib64/openmpi ++ export CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.14/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ __MODULES_LMALTNAME='mpi/openmpi-x86_64&as|mpi/default&as|mpi/latest' ++ export __MODULES_LMALTNAME ++ __MODULES_LMCONFLICT='mpi/openmpi-x86_64&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=mpicc + export CC + CXX=mpicxx + export CXX + /usr/bin/cmake -S . -B build_openmpi -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DCMAKE_INSTALL_FULL_SBINDIR:PATH=/usr/bin -DCMAKE_INSTALL_SBINDIR:PATH=bin -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBOUT_USE_FFTW=ON -DBOUT_USE_NETCDF=ON -DBOUT_USE_SCOREP=OFF -DBOUT_USE_SYSTEM_MPARK_VARIANT=ON -DBOUT_USE_LAPACK=ON -DBOUT_USE_NLS=ON -DBOUT_USE_SYSTEM_FMT=ON -DBOUT_USE_UUID_SYSTEM_GENERATOR=ON -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_INSTALL_LIBDIR=/usr/lib64/openmpi/lib -DCMAKE_INSTALL_BINDIR=/usr/lib64/openmpi/bin -DCMAKE_INSTALL_INCLUDEDIR=/usr/include/openmpi-x86_64/bout++/ -DCMAKE_INSTALL_DATAROOTDIR=/usr/share -DCMAKE_INSTALL_PYTHON_SITEARCH=/usr/lib64/python3.14/site-packages/openmpi -DBOUT_TEST_TIMEOUT=900 -DBOUT_BUILD_DOCS=ON -DBOUT_USE_PETSC=ON -DBOUT_USE_SUNDIALS=ON -- Configuring BOUT++ version 5.2.1 -- The CXX compiler identification is GNU 15.2.1 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/lib64/openmpi/bin/mpicxx - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Python3: /usr/bin/python3.14 (found version "3.14.2") found components: Interpreter -- Could NOT find ClangFormat (missing: ClangFormat_BIN) CMake Warning (dev) at CMakeLists.txt:397 (message): 'src/field/generated_fieldops.cxx' will not be regenerated when you make changes to either 'src/field/gen_fieldops.py' or 'src/field/gen_fieldops.jinja'. This is because either Python3 or clang-format is missing (see above messages for more information) or BOUT_GENERATE_FIELDOPS is OFF (current value: OFF). This warning is only important for BOUT++ developers and can otherwise be safely ignored. This warning is for project developers. Use -Wno-dev to suppress it. -- Found Python3: /usr/bin/python3.14 (found suitable version "3.14.2", minimum required is "3.6") found components: Interpreter Development Development.Module Development.Embed -- Found Numpy: /usr/include (found version "2.3.5") -- Found Cython: TRUE (found version "3.2.1") -- Found Bash: /usr/bin/bash (found version "5.3.0") -- Building BOUT++ Python interface -- Found MPI_CXX: /usr/lib64/openmpi/bin/mpicxx (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Enable OpenMP: OFF -- HYPRE support: OFF -- Found PkgConfig: /usr/bin/pkg-config (found version "2.3.0") -- Checking for one of the modules 'PETSc>3.4.0;petsc>3.4.0' -- Found PETSc: /usr/include/openmpi-x86_64/petsc -- PETSc support: ON -- Using external mpark.variant -- Using external fmt CMake Deprecation Warning at externalpackages/PVODE/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- PVODE support: ON -- The C compiler identification is GNU 15.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/lib64/openmpi/bin/mpicc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Found netCDF: /usr/lib64/libnetcdf.so (found version "4.9.3") -- Found netCDFCxx version 4.3.1 -- Found netCDFCxx: /usr/lib64/libnetcdf_c++4.so (found version "4.3.1") -- NetCDF support: ON -- ADIOS2 support: OFF -- Found FFTW: /usr/lib64/libfftw3.so -- FFTW support: ON -- Looking for sgemm_ -- Looking for sgemm_ - not found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Looking for sgemm_ -- Looking for sgemm_ - found -- Found BLAS: /usr/lib64/libflexiblas.so -- Looking for cheev_ -- Looking for cheev_ - found -- Found LAPACK: /usr/lib64/libflexiblas.so;-lm;-ldl -- LAPACK support: TRUE -- SLEPc support: OFF -- SUNDIALS support: ON -- Found Gettext: /usr/bin/msgmerge (found version "0.26") -- Found Intl: built in to C library -- libuuid not found, using fallback UUID generator -- UUID_SYSTEM_GENERATOR: FALSE -- Enable coverage: OFF -- Git revision: Unknown -- Performing Test HAS_FLAG__Wnull_dereference -- Performing Test HAS_FLAG__Wnull_dereference - Success -- Warning flag is supported by compiler: -Wnull-dereference -- Found negative flag: -Wno-cast-function-type replaced with -Wcast-function-type -- Performing Test HAS_FLAG__Wno_cast_function_type -- Performing Test HAS_FLAG__Wno_cast_function_type - Success -- Warning flag is supported by compiler: -Wno-cast-function-type -- Runtime checking level: CHECK=2 -- Message stack: BOUT_USE_MSGSTACK=ON -- Extra debug output: BOUT_USE_OUTPUT_DEBUG=OFF -- Signal handling: BOUT_USE_SIGNAL=ON -- Output coloring: BOUT_USE_COLOR=ON -- Field name tracking: BOUT_USE_TRACK=ON -- Signalling floating point exceptions: BOUT_USE_SIGFPE=OFF -- Enable backtrace: BOUT_USE_BACKTRACE=ON -- Performing Test HAS_PRETTY_FUNCTION -- Performing Test HAS_PRETTY_FUNCTION - Success -- Setting build type to 'RelWithDebInfo' as none was specified. -- Not building test test-laplace-hypre3d, requirement not met: BOUT_HAS_HYPRE -- Not building test test-laplacexy2-hypre, requirement not met: BOUT_HAS_HYPRE -- Not building test test-options-adios, requirement not met: BOUT_HAS_ADIOS2 -- Not building test test-slepc-solver, requirement not met: BOUT_HAS_SLEPC -- Not building test MMS-advection-arakawa, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-central, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-upwind, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-weno3, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-diffusion2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-hw, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-laplace, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-advection, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-d2dx2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-d2dz2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-diffusion, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-time, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-time-petsc, requirement not met: BOUT_RUN_ALL_TESTS -- Not building example test_laplacexy_hypre, requirement not met: BOUT_HAS_HYPRE -- Found Doxygen: /usr/bin/doxygen (found version "1.15.0") found components: doxygen dot -- Found Sphinx: /usr/bin/sphinx-build -------------------------------- BOUT++ Configuration Summary -------------------------------- Bundled PVODE support : ON PETSc support : ON SLEPc support : OFF SUNDIALS support : ON HYPRE support : OFF NetCDF support : ON ADIOS2 support : OFF FFTW support : ON LAPACK support : TRUE OpenMP support : OFF Natural language support : ON ScoreP support : OFF System UUID generator : FALSE Extra debug output : OFF Runtime error check level: 2 Signal handling : ON Output coloring : ON Field name tracking : ON Floating point exceptions: OFF Backtrace enabled : ON RAJA enabled : OFF Umpire enabled : OFF Caliper enabled : OFF CUDA enabled : OFF Metric type : 2D Python API support : ON Sanitizers enabled : None === Python === Make sure that the tools/pylib directory is in your PYTHONPATH e.g. by adding to your ~/.bashrc file export PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib:$PYTHONPATH *** Now run `cmake --build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi` to compile BOUT++ *** -- Configuring done (3.1s) -- Generating done (0.2s) CMake Warning: Manually-specified variables were not used by the project: BOUT_TEST_TIMEOUT CMAKE_CXX_FLAGS_RELEASE CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi + /usr/bin/cmake --build build_openmpi -j4 --verbose Change Dir: '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend /usr/bin/gmake -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/mofiles.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/gmake -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o [ 0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o [ 0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o -MF CMakeFiles/pvode.dir/source/nvector.cpp.o.d -o CMakeFiles/pvode.dir/source/nvector.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o -MF CMakeFiles/pvode.dir/source/cvode.cpp.o.d -o CMakeFiles/pvode.dir/source/cvode.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o -MF CMakeFiles/pvode.dir/source/llnlmath.cpp.o.d -o CMakeFiles/pvode.dir/source/llnlmath.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/llnlmath.cpp [ 0%] Generating locale/es/libbout.gmo, _mo_file_es cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/es/ cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/es/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/es/libbout.po [ 0%] Generating locale/de/libbout.gmo, _mo_file_de cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/de/ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:429: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 429 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:485: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 485 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:543: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 543 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:565: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 565 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:583: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 583 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:698: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 698 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:714: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 714 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:730: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 730 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:745: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 745 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:761: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 761 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:777: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 777 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:793: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 793 | #pragma omp parallel for cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/de/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/de/libbout.po /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:809: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 809 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:824: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 824 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:831: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 831 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:837: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 837 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:850: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 850 | #pragma omp parallel for [ 2%] Generating locale/fr/libbout.gmo, _mo_file_fr cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/fr/ cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/fr/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/fr/libbout.po /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp: In function ‘void pvode::N_VLinearSum(real, N_Vector, real, N_Vector, N_Vector)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:189:12: warning: unused variable ‘v’ [-Wunused-variable] 189 | N_Vector v, v1, v2; | ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp: In function ‘pvode::real pvode::N_VWL2Norm(N_Vector, N_Vector)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:533:14: warning: variable ‘N_global’ set but not used [-Wunused-but-set-variable] 533 | integer N, N_global; | ^~~~~~~~ [ 2%] Generating locale/zh_CN/libbout.gmo, _mo_file_zh_CN cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/zh_CN/ cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/zh_CN/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/zh_CN/libbout.po [ 2%] Generating locale/zh_TW/libbout.gmo, _mo_file_zh_TW cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/zh_TW/ cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/locale/zh_TW/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/zh_TW/libbout.po gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 2%] Built target mofiles [ 5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -MF CMakeFiles/pvode.dir/source/cvspgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvspgmr.cpp [ 5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o -MF CMakeFiles/pvode.dir/source/spgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/spgmr.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp: In function ‘int pvode::SpgmrSolve(SpgmrMem, void*, N_Vector, N_Vector, int, int, real, int, void*, N_Vector, N_Vector, ATimesFn, PSolveFn, real*, int*, int*)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:159:8: warning: unused variable ‘s_r0_norm’ [-Wunused-variable] 159 | real s_r0_norm, beta, rotation_product, r_norm, s_product, rho; | ^~~~~~~~~ [ 5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o [ 5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o -MF CMakeFiles/pvode.dir/source/iterativ.cpp.o.d -o CMakeFiles/pvode.dir/source/iterativ.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/iterativ.cpp cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o -MF CMakeFiles/pvode.dir/source/cvdiag.cpp.o.d -o CMakeFiles/pvode.dir/source/cvdiag.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvdiag.cpp /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:328:17: warning: ‘krydim’ may be used uninitialized [-Wmaybe-uninitialized] 328 | for (i=1; i <= krydim; i++) yg[i]=ZERO; | ~~^~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:161:36: note: ‘krydim’ was declared here 161 | int i, j, k, l, l_plus_1, l_max, krydim, ier, ntries; | ^~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:386:3: warning: ‘rho’ may be used uninitialized [-Wmaybe-uninitialized] 386 | if (rho < beta) { | ^~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:159:62: note: ‘rho’ was declared here 159 | real s_r0_norm, beta, rotation_product, r_norm, s_product, rho; | ^~~ [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o -MF CMakeFiles/pvode.dir/source/smalldense.cpp.o.d -o CMakeFiles/pvode.dir/source/smalldense.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/smalldense.cpp In function ‘pvode::CVnlsFunctional(pvode::CVodeMemRec*)’, inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1826:45, inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1358:18, inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:882:19: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1876:49: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized] 1876 | if ((m==maxcor) || ((m >= 2) && (del > RDIV * delp))) | ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1843:13: note: ‘delp’ was declared here 1843 | real del, delp, dcon; | ^~~~ In function ‘pvode::CVNewtonIteration(pvode::CVodeMemRec*)’, inlined from ‘pvode::CVnlsNewton(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1944:28, inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1827:41, inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1358:18, inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:882:19: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:2021:50: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized] 2021 | if ((m == maxcor) || ((m >= 2) && (del > RDIV*delp))) { | ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1971:13: note: ‘delp’ was declared here 1971 | real del, delp, dcon; | ^~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/smalldense.cpp: In function ‘pvode::integer pvode::gefa(real**, integer, integer*)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/smalldense.cpp:82:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 82 | if (swap = (l != k)) { | ~~~~~^~~~~~~~~~ [ 8%] Linking CXX shared library ../../lib/libpvode.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvode.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,--dependency-file=CMakeFiles/pvode.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvode.so.1.0.0 -o ../../lib/libpvode.so.1.0.0 CMakeFiles/pvode.dir/source/cvode.cpp.o CMakeFiles/pvode.dir/source/nvector.cpp.o CMakeFiles/pvode.dir/source/llnlmath.cpp.o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o CMakeFiles/pvode.dir/source/spgmr.cpp.o CMakeFiles/pvode.dir/source/iterativ.cpp.o CMakeFiles/pvode.dir/source/cvdiag.cpp.o CMakeFiles/pvode.dir/source/smalldense.cpp.o -Wl,-rpath,::::::::::::::::::::::::::: cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 8%] Built target pvode /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -MF CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o.d -o CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/precon/pvbbdpre.cpp [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o -MF CMakeFiles/pvpre.dir/precon/band.cpp.o.d -o CMakeFiles/pvpre.dir/precon/band.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/precon/band.cpp [ 10%] Linking CXX shared library ../../lib/libpvpre.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvpre.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,--dependency-file=CMakeFiles/pvpre.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvpre.so.1.0.0 -o ../../lib/libpvpre.so.1.0.0 CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o CMakeFiles/pvpre.dir/precon/band.cpp.o -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib: ../../lib/libpvode.so.1.0.0 cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 10%] Built target pvpre /usr/bin/gmake -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 10%] Generating bout++-time.cxx /usr/bin/cmake -P /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/cmake/GenerateDateTimeFile.cmake cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/gmake -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 13%] Building CXX object CMakeFiles/bout++.dir/src/bout++.cxx.o [ 13%] Building CXX object CMakeFiles/bout++.dir/src/field/field.cxx.o [ 13%] Building CXX object CMakeFiles/bout++.dir/src/field/field3d.cxx.o [ 13%] Building CXX object CMakeFiles/bout++.dir/src/field/field2d.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/bout++.cxx.o -MF CMakeFiles/bout++.dir/src/bout++.cxx.o.d -o CMakeFiles/bout++.dir/src/bout++.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/bout++.cxx /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_region.cxx [ 43%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx [ 43%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/coordinates.cxx /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In function ‘void verifyNumPoints(BoundaryRegion*, int)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:80:21: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 80 | if (mesh->firstY()) { | ~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field_factory.hxx:32, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/boundary_standard.hxx:9, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:1: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/mesh.hxx:437:66: note: declared here 437 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:83:20: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 83 | if (mesh->lastY()) { | ~~~~~~~~~~~^~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/mesh.hxx:441:65: note: declared here 441 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:473:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 473 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 | t); | ~~ In file included from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field_data.hxx:50, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field.hxx:39, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field2d.hxx:35, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/boundary_op.hxx:9, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/boundary_standard.hxx:6: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:517:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 517 | val = fg->generate(xnorm, TWOPI * ynorm, | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 518 | TWOPI * (zk - 0.5) / (mesh->LocalNz), t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O3::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:978:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 978 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 979 | t); | ~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O4::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:1444:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 1444 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1445 | t); | ~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryNeumann::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:2152:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 2152 | val = fg->generate(xnorm, TWOPI * ynorm, | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 2153 | TWOPI * (zk - 0.5) / (mesh->LocalNz), t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ [ 43%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection 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-I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -MF CMakeFiles/bout++.dir/src/sys/derivs.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/derivs.cxx [ 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-I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -MF CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx [ 81%] Building CXX object CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -MF CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/generator_context.cxx /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx: In member function ‘virtual double FieldGenerator::generate(const bout::generator::Context&)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx:43:18: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 43 | return generate(ctx.x(), ctx.y(), ctx.z(), ctx.t()); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx:25: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ [ 81%] Building CXX object CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables 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CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/optionsreader.cxx In file included from /usr/include/openmpi-x86_64/ncFile.h:2, from /usr/include/openmpi-x86_64/netcdf:16, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_netcdf.hxx:22, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_io.cxx:7: /usr/include/openmpi-x86_64/ncGroup.h:18:14: warning: ‘netCDF::file_id’ defined but not used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ In file included from /usr/include/openmpi-x86_64/ncFile.h:2, from /usr/include/openmpi-x86_64/netcdf:16, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_netcdf.hxx:22, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_netcdf.cxx:5: /usr/include/openmpi-x86_64/ncGroup.h:18:14: warning: ‘netCDF::file_id’ defined but not used [-Wunused-variable] 18 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CMakeFiles/bout++.dir/src/sys/timer.cxx.o CMakeFiles/bout++.dir/src/sys/type_name.cxx.o CMakeFiles/bout++.dir/src/sys/utils.cxx.o "CMakeFiles/bout++.dir/bout++-time.cxx.o" -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib: /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/libfmt.so.11.2.0 lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl -ldl /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf.so /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpIn member function ‘__ct ’, inlined from ‘_Construct’ at /usr/include/c++/15/bits/stl_construct.h:133:7, inlined from ‘construct’ at /usr/include/c++/15/bits/alloc_traits.h:805:19, inlined from ‘__ct ’ at /usr/include/c++/15/bits/shared_ptr_base.h:606:39, inlined from ‘__ct ’ at /usr/include/c++/15/bits/shared_ptr_base.h:969:16, inlined from ‘__ct ’ at /usr/include/c++/15/bits/shared_ptr_base.h:1719:14, inlined from ‘__ct ’ at /usr/include/c++/15/bits/shared_ptr.h:463:59, inlined from ‘make_shared’ at /usr/include/c++/15/bits/shared_ptr.h:1008:39, inlined from ‘get’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/array.hxx:428:38, inlined from ‘reallocate’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/array.hxx:226:14, inlined from ‘__ct_base ’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/invert/laplace/impls/spt/spt.cxx:68:21: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/array.hxx:75:12: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 75 | data = new T[len]; | ^ /usr/include/c++/15/new: In member function ‘__ct_base ’: /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ i/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 /usr/bin/cmake -E cmake_symlink_library lib/libbout++.so.5.2.0 lib/libbout++.so.5.2.0 lib/libbout++.so gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 91%] Built target bout++ /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 91%] Generating resolve_enum.pxd [ 91%] Generating helper.cxx [ 94%] Generating boutpp.pyx [ 94%] Generating boutcpp.pxd cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.14 generate.py helper.cxx.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/helper.cxx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.14 generate.py boutpp.pyx.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/boutpp.pyx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.14 generate.py boutcpp.pxd.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/boutcpp.pxd cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.14 generate.py resolve_enum.pxd.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/resolve_enum.pxd [ 94%] Generating helper.h cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.14 generate.py helper.h.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/helper.h [ 94%] Generating libboutpp.cpp cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy boutpp.pyx libboutpp.pyx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/python3.14 -m cython libboutpp.pyx --cplus -3 -X binding=True -X embedsignature=True warning: resolve_enum.pxd:49:21: 'deflt' redeclared warning: resolve_enum.pxd:189:24: 'Standard' redeclared warning: resolve_enum.pxd:223:15: 'Standard' redeclared performance hint: libboutpp.pyx:2149:0: Exception check on 'callback' will always require the GIL to be acquired. Possible solutions: 1. Declare 'callback' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'callback' to allow an error code to be returned. cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 97%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/helper.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_314_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build -I/usr/include/python3.14 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/helper.cxx.o -MF CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/helper.cxx.o.d -o CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/helper.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/helper.cxx [ 97%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/libboutpp.cpp.o [ 97%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/boutexception_helper.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_314_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build -I/usr/include/python3.14 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/libboutpp.cpp.o -MF CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/libboutpp.cpp.o.d -o CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/libboutpp.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_314_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build -I/usr/include/python3.14 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/boutexception_helper.cxx.o -MF CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/boutexception_helper.cxx.o.d -o CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/boutexception_helper.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/boutexception_helper.cxx In file included from /usr/include/python3.14/pyconfig.h:6, from /usr/include/python3.14/Python.h:14, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/boutexception_helper.cxx:2: /usr/include/python3.14/pyconfig-64.h:2007:9: warning: ‘_POSIX_C_SOURCE’ redefined 2007 | #define _POSIX_C_SOURCE 200809L | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/15/x86_64-redhat-linux/bits/c++config.h:2641, from /usr/include/c++/15/bits/version.h:51, from /usr/include/c++/15/compare:38, from /usr/include/c++/15/array:40, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/boutexception.hxx:6, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/boutexception_helper.cxx:1: /usr/include/features.h:319:10: note: this is the location of the previous definition 319 | # define _POSIX_C_SOURCE 202405L | ^~~~~~~~~~~~~~~ /usr/include/python3.14/pyconfig-64.h:2043:9: warning: ‘_XOPEN_SOURCE’ redefined 2043 | #define _XOPEN_SOURCE 700 | ^~~~~~~~~~~~~ /usr/include/features.h:234:10: note: this is the location of the previous definition 234 | # define _XOPEN_SOURCE 800 | ^~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:37683:46: warning: ‘__pyx_obj_9libboutpp_Vector2D* __pyx_f_9libboutpp_v2dFromObj(Vector2D)’ defined but not used [-Wunused-function] 37683 | static struct __pyx_obj_9libboutpp_Vector2D *__pyx_f_9libboutpp_v2dFromObj(Vector2D __pyx_v_i) { | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 97%] Linking CXX shared library libboutpp.cpython-314-x86_64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E cmake_link_script CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,--dependency-file=CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libboutpp.cpython-314-x86_64-linux-gnu.so -o libboutpp.cpython-314-x86_64-linux-gnu.so "CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/libboutpp.cpp.o" "CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/helper.cxx.o" "CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/boutexception_helper.cxx.o" -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib: ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 97%] Built target boutpp.cpython-314-x86_64-linux-gnu /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Building python interface cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpython-314-x86_64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-314-x86_64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/../boutpp/__init__.py gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target boutpp gmake[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 0 + PYPA= + LDPA=/usr/lib64/openmpi/lib ++ pwd + export PYTHONPATH=:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/ + PYTHONPATH=:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/ ++ pwd + export LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib/ + LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib/ + /usr/bin/cmake --build build_openmpi/manual -j4 --verbose Change Dir: '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual//CMakeFiles/progress.marks cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/gmake -f CMakeFiles/Makefile2 manual/all gmake[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/gmake -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/CMakeFiles/sphinx-html.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/gmake -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Generating HTML documentation with Sphinx in /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/docs cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual && /usr/bin/sphinx-build -b html /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/docs Running Sphinx v8.2.3 breathe module not installed recommonmark module not installed loading translations [en]... done making output directory... done Converting `source_suffix = ['.rst', '.md']` to `source_suffix = {'.rst': 'restructuredtext', '.md': 'restructuredtext'}`. building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 48 source files that are out of date updating environment: [new config] 48 added, 0 changed, 0 removed reading sources... [ 2%] _apidoc/boutdata reading sources... [ 4%] _apidoc/boutpp reading sources... [ 6%] _apidoc/boututils No mlab available reading sources... [ 8%] _apidoc/zoidberg reading sources... [ 10%] api_reference reading sources... [ 12%] developer_docs/code_layout reading sources... [ 15%] developer_docs/contributing reading sources... [ 17%] developer_docs/data_types reading sources... [ 19%] developer_docs/debugging reading sources... [ 21%] developer_docs/file_io reading sources... [ 23%] developer_docs/git_basics reading sources... [ 25%] developer_docs/mesh reading sources... [ 27%] developer_docs/natural_language reading sources... [ 29%] developer_docs/performance_profiling reading sources... [ 31%] developer_docs/petsc_interface reading sources... [ 33%] index reading sources... [ 35%] user_docs/BOUT_Gradperp_op reading sources... [ 38%] user_docs/adios2 reading sources... [ 40%] user_docs/advanced_install reading sources... [ 42%] user_docs/algebraic_operators reading sources... [ 44%] user_docs/boundary_options reading sources... [ 46%] user_docs/bout_functions_for_physics reading sources... [ 48%] user_docs/bout_options reading sources... [ 50%] user_docs/coordinates reading sources... [ 52%] user_docs/differential_operators reading sources... [ 54%] user_docs/eigenvalue_solver reading sources... [ 56%] user_docs/gpu_support reading sources... [ 58%] user_docs/input_grids reading sources... [ 60%] user_docs/installing reading sources... [ 62%] user_docs/introduction reading sources... [ 65%] user_docs/invertable_operator reading sources... [ 67%] user_docs/laplacian reading sources... [ 69%] user_docs/makefiles reading sources... [ 71%] user_docs/new_in_v5 reading sources... [ 73%] user_docs/nonlocal reading sources... [ 75%] user_docs/output_and_post reading sources... [ 77%] user_docs/parallel-transforms reading sources... [ 79%] user_docs/petsc reading sources... [ 81%] user_docs/physics_models reading sources... [ 83%] user_docs/preconditioning reading sources... [ 85%] user_docs/python reading sources... [ 88%] user_docs/python_boutpp reading sources... [ 90%] user_docs/quickstart reading sources... [ 92%] user_docs/running_bout reading sources... [ 94%] user_docs/staggered_grids reading sources... [ 96%] user_docs/testing reading sources... [ 98%] user_docs/time_integration reading sources... [100%] user_docs/variable_init WARNING: autodoc: failed to import module 'cbdtoeqdsk' from module 'boutdata'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boutdata.cbdtoeqdsk'\n"] [autodoc.import_object] /usr/lib/python3.14/site-packages/boutdata/collect.py:docstring of boutdata.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :no-index: for one of them WARNING: autodoc: failed to import module 'gen_surface' from module 'boutdata'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boutdata.gen_surface'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'input' from module 'boutdata'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boutdata.input'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'mayavi2' from module 'boutdata'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boutdata.mayavi2'\n"] [autodoc.import_object] /usr/lib/python3.14/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:5: ERROR: Unexpected indentation. [docutils] /usr/lib/python3.14/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:6: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils] WARNING: autodoc: failed to import module 'settings' from module 'boutdata'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boutdata.settings'\n"] [autodoc.import_object] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/boutpp/__init__.py:docstring of libboutpp.Laplacian:6: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/boutpp/__init__.py:docstring of libboutpp.PhysicsModel:14: ERROR: Unexpected indentation. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/boutpp/__init__.py:docstring of libboutpp.create3D:3: ERROR: Unexpected indentation. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/boutpp/__init__.py:docstring of libboutpp.Laplacian:6: ERROR: Unknown target name: "abla". [docutils] WARNING: autodoc: failed to import module 'analyse_equil_2' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.analyse_equil_2'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'anim' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/anim.py", line 19, in \n from tvtk.tools import visual\n', "ModuleNotFoundError: No module named 'tvtk'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'ask' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.ask'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'boutgrid' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/boutgrid.py", line 3, in \n from tvtk.api import tvtk\n', "ModuleNotFoundError: No module named 'tvtk'\n"] [autodoc.import_object] /usr/lib/python3.14/site-packages/boututils/calculus.py:docstring of boututils.calculus.deriv2D:14: ERROR: Unexpected indentation. [docutils] WARNING: autodoc: failed to import module 'closest_line' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.closest_line'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'crosslines' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.crosslines'\n"] [autodoc.import_object] looking for now-outdated files... WARNING: autodoc: failed to import module 'efit_analyzer' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.efit_analyzer'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'fft_deriv' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.fft_deriv'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'file_import' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.file_import'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'geqdsk' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.geqdsk'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'idl_tabulate' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.idl_tabulate'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'int_func' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/int_func.py", line 4, in \n from past.utils import old_div\n', "ModuleNotFoundError: No module named 'past'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'local_min_max' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.local_min_max'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'mode_structure' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/mode_structure.py", line 4, in \n from past.utils import old_div\n', "ModuleNotFoundError: No module named 'past'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'moment_xyzt' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/moment_xyzt.py", line 2, in \n from past.utils import old_div\n', "ModuleNotFoundError: No module named 'past'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'options' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.options'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'radial_grid' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.radial_grid'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'read_geqdsk' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.read_geqdsk'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'spectrogram' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/spectrogram.py", line 10, in \n from scipy import fftpack, pi\n', "ImportError: cannot import name 'pi' from 'scipy' (/usr/lib64/python3.14/site-packages/scipy/__init__.py)\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'surface_average' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/surface_average.py", line 5, in \n from past.utils import old_div\n', "ModuleNotFoundError: No module named 'past'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'volume_integral' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/volume_integral.py", line 4, in \n from past.utils import old_div\n', "ModuleNotFoundError: No module named 'past'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'watch' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.watch'\n"] [autodoc.import_object] /usr/lib/python3.14/site-packages/zoidberg/field.py:docstring of zoidberg.field.DommaschkPotentials:3: ERROR: Unexpected indentation. [docutils] /usr/lib/python3.14/site-packages/zoidberg/field.py:docstring of zoidberg.field.MagneticField.attributes:1: WARNING: duplicate object description of zoidberg.field.MagneticField.attributes, other instance in _apidoc/zoidberg, use :no-index: for one of them /usr/lib/python3.14/site-packages/zoidberg/field.py:docstring of zoidberg.field.MagneticField.boundary:1: WARNING: duplicate object description of zoidberg.field.MagneticField.boundary, other instance in _apidoc/zoidberg, use :no-index: for one of them /usr/lib/python3.14/site-packages/zoidberg/field.py:docstring of zoidberg.field.RotatingEllipse:3: ERROR: Unexpected indentation. [docutils] /usr/lib/python3.14/site-packages/zoidberg/field.py:docstring of zoidberg.field.RotatingEllipse.coil:3: ERROR: Unexpected indentation. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/api_reference.rst:4: WARNING: toctree glob pattern '_breathe_autogen/*' didn't match any documents /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/file_io.rst:114: ERROR: Unknown interpreted text role "py". [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/performance_profiling.rst:85: WARNING: Inline literal start-string without end-string. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/boundary_options.rst:120: WARNING: Footnote [#] is not referenced. [ref.footnote] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:400: WARNING: Title underline too short. Working with an active ``conda`` environment ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:400: WARNING: Title underline too short. Working with an active ``conda`` environment ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:406: ERROR: Unexpected indentation. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:407: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils] /usr/lib/python3.14/site-packages/boututils/__init__.py:docstring of boututils:1: WARNING: duplicate object description of boututils, other instance in _apidoc/boututils, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boutdata:1: WARNING: duplicate object description of boutdata, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.boutarray.BoutArray:1: WARNING: duplicate object description of boutdata.BoutArray, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.boutarray.BoutArray.dims_from_type:1: WARNING: duplicate object description of boutdata.BoutArray.dims_from_type, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.boutarray.BoutArray.get_dims_type:1: WARNING: duplicate object description of boutdata.BoutArray.get_dims_type, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.boutarray.BoutArray.type_from_dims:1: WARNING: duplicate object description of boutdata.BoutArray.type_from_dims, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.boutwarnings.alwayswarn:1: WARNING: duplicate object description of boutdata.alwayswarn, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boutdata.collect.attributes:1: WARNING: duplicate object description of boutdata.attributes, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.build_and_log:1: WARNING: duplicate object description of boutdata.build_and_log, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boutdata.collect.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.determineNumberOfCPUs:1: WARNING: duplicate object description of boutdata.determineNumberOfCPUs, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.launch:1: WARNING: duplicate object description of boutdata.launch, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.launch_safe:1: WARNING: duplicate object description of boutdata.launch_safe, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.shell:1: WARNING: duplicate object description of boutdata.shell, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.shell_safe:1: WARNING: duplicate object description of boutdata.shell_safe, other instance in _apidoc/boutdata, use :no-index: for one of them /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/running_bout.rst:462: WARNING: Literal block expected; none found. [docutils] none found pickling environment... done checking consistency... done preparing documents... WARNING: unsupported theme option 'repository_url' given WARNING: unsupported theme option 'repository_branch' given WARNING: unsupported theme option 'path_to_docs' given WARNING: unsupported theme option 'use_edit_page_button' given WARNING: unsupported theme option 'use_repository_button' given WARNING: unsupported theme option 'use_issues_button' given WARNING: unsupported theme option 'home_page_in_toc' given done copying assets... copying static files... Writing evaluated template result to /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/docs/_static/language_data.js Writing evaluated template result to /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/docs/_static/documentation_options.js Writing evaluated template result to /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/docs/_static/basic.css Writing evaluated template result to /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/docs/_static/sphinxdoc.css copying static files: done copying extra files... copying extra files: done copying assets: done writing output... [ 2%] _apidoc/boutdata writing output... [ 4%] _apidoc/boutpp writing output... [ 6%] _apidoc/boututils writing output... [ 8%] _apidoc/zoidberg writing output... [ 10%] api_reference writing output... [ 12%] developer_docs/code_layout writing output... [ 15%] developer_docs/contributing writing output... [ 17%] developer_docs/data_types writing output... [ 19%] developer_docs/debugging writing output... [ 21%] developer_docs/file_io writing output... [ 23%] developer_docs/git_basics writing output... [ 25%] developer_docs/mesh writing output... [ 27%] developer_docs/natural_language writing output... [ 29%] developer_docs/performance_profiling writing output... [ 31%] developer_docs/petsc_interface writing output... [ 33%] index writing output... [ 35%] user_docs/BOUT_Gradperp_op writing output... [ 38%] user_docs/adios2 writing output... [ 40%] user_docs/advanced_install writing output... [ 42%] user_docs/algebraic_operators writing output... [ 44%] user_docs/boundary_options writing output... [ 46%] user_docs/bout_functions_for_physics writing output... [ 48%] user_docs/bout_options writing output... [ 50%] user_docs/coordinates writing output... [ 52%] user_docs/differential_operators writing output... [ 54%] user_docs/eigenvalue_solver writing output... [ 56%] user_docs/gpu_support writing output... [ 58%] user_docs/input_grids writing output... [ 60%] user_docs/installing writing output... [ 62%] user_docs/introduction writing output... [ 65%] user_docs/invertable_operator writing output... [ 67%] user_docs/laplacian writing output... [ 69%] user_docs/makefiles writing output... [ 71%] user_docs/new_in_v5 writing output... [ 73%] user_docs/nonlocal writing output... [ 75%] user_docs/output_and_post writing output... [ 77%] user_docs/parallel-transforms writing output... [ 79%] user_docs/petsc writing output... [ 81%] user_docs/physics_models writing output... [ 83%] user_docs/preconditioning writing output... [ 85%] user_docs/python writing output... [ 88%] user_docs/python_boutpp writing output... [ 90%] user_docs/quickstart writing output... [ 92%] user_docs/running_bout writing output... [ 94%] user_docs/staggered_grids writing output... [ 96%] user_docs/testing writing output... [ 98%] user_docs/time_integration writing output... [100%] user_docs/variable_init /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:81: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:87: WARNING: unknown document: '../_breathe_autogen/file/field2d_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:93: WARNING: unknown document: '../_breathe_autogen/file/field3d_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:100: WARNING: unknown document: '../_breathe_autogen/file/field__data_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:105: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:112: WARNING: unknown document: '../_breathe_autogen/file/initialprofiles_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: '../_breathe_autogen/file/vecops_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:124: WARNING: unknown document: '../_breathe_autogen/file/vector2d_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:129: WARNING: unknown document: '../_breathe_autogen/file/vector3d_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:133: WARNING: unknown document: '../_breathe_autogen/file/where_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft__fftw_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:146: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:154: WARNING: unknown document: '../_breathe_autogen/file/serial__tri_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:156: WARNING: unknown document: '../_breathe_autogen/file/serial__tri_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:160: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:162: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:166: WARNING: unknown document: '../_breathe_autogen/file/spt_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:168: WARNING: unknown document: '../_breathe_autogen/file/spt_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:173: WARNING: unknown document: '../_breathe_autogen/file/invert__parderiv_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:181: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:183: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:185: WARNING: unknown document: '../_breathe_autogen/file/lapack__routines_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:191: WARNING: unknown document: '../_breathe_autogen/file/boundary__factory_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:195: WARNING: unknown document: '../_breathe_autogen/file/boundary__region_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:200: WARNING: unknown document: '../_breathe_autogen/file/boundary__standard_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:209: WARNING: unknown document: '../_breathe_autogen/file/interpolation_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:212: WARNING: unknown document: '../_breathe_autogen/file/mesh_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:220: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:224: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:228: WARNING: unknown document: '../_breathe_autogen/file/gyro__average_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:231: WARNING: unknown document: '../_breathe_autogen/file/smoothing_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:234: WARNING: unknown document: '../_breathe_autogen/file/sourcex_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:240: WARNING: unknown document: '../_breathe_autogen/file/solver_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:247: WARNING: unknown document: '../_breathe_autogen/file/cvode_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:251: WARNING: unknown document: '../_breathe_autogen/file/cvode_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:255: WARNING: unknown document: '../_breathe_autogen/file/ida_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:259: WARNING: unknown document: '../_breathe_autogen/file/ida_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:263: WARNING: unknown document: '../_breathe_autogen/file/petsc_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:266: WARNING: unknown document: '../_breathe_autogen/file/petsc_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:270: WARNING: unknown document: '../_breathe_autogen/file/pvode_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:274: WARNING: unknown document: '../_breathe_autogen/file/pvode_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:278: WARNING: unknown document: '../_breathe_autogen/file/boutcomm_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:280: WARNING: unknown document: '../_breathe_autogen/file/boutexception_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:289: WARNING: unknown document: '../_breathe_autogen/file/msg__stack_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:296: WARNING: unknown document: '../_breathe_autogen/file/options_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:300: WARNING: unknown document: '../_breathe_autogen/file/optionsreader_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:302: WARNING: unknown document: '../_breathe_autogen/file/output_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:304: WARNING: unknown document: '../_breathe_autogen/file/range_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:308: WARNING: unknown document: '../_breathe_autogen/file/timer_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:312: WARNING: unknown document: '../_breathe_autogen/file/utils_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:318: WARNING: unknown document: '../_breathe_autogen/file/optionparser_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:320: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:322: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/mesh.rst:31: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field2d_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field3d_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8hxx' [ref.doc] generating indices... /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: '&' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: '|' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: 'false' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: 'true' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:153: WARNING: Unparseable C++ cross-reference: '>' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] > ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] > ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] > ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:153: WARNING: Unparseable C++ cross-reference: '<' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] < ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] < ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] < ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:163: WARNING: Unparseable C++ cross-reference: 'true' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:163: WARNING: Unparseable C++ cross-reference: 'false' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: 'true' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: 'false' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: '&' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: '|' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/differential_operators.rst:530: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/differential_operators.rst:538: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/laplacian.rst:185: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/output_and_post.rst:580: WARNING: Lexing literal_block 'AppendTo[$Path,"/full/path/to/BOUT/tools/mathematicalib"]' as "mathematica" resulted in an error at token: '$'. Retrying in relaxed mode. [misc.highlighting_failure] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/physics_models.rst:31: WARNING: undefined label: 'sec-cmake' [ref.ref] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/time_integration.rst:1087: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx' [ref.doc] genindex py-modindex done writing additional pages... search done copying images... [ 4%] figs/layout1.png copying images... [ 8%] figs/layout2.png copying images... [ 12%] figs/memory.png copying images... [ 15%] figs/petsc_interface_overview.png copying images... [ 19%] figs/operator_stencil_uml.png copying images... [ 23%] figs/petsc_vector_set.png copying images... [ 27%] figs/fluid_norm_mc.png copying images... [ 31%] figs/diffStencils.png copying images... [ 35%] figs/topology_cross_section.svg copying images... [ 38%] figs/topology_schematic.svg copying images... [ 42%] figs/boutmesh-comms.png copying images... 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The HTML pages are in docs. cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual && /usr/bin/cmake -E echo Generated\ HTML\ docs\ in\ file:///builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/docs/index.html Generated HTML docs in file:///builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/docs/index.html gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target sphinx-html /usr/bin/gmake -f manual/CMakeFiles/docs.dir/build.make manual/CMakeFiles/docs.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/manual/CMakeFiles/docs.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/gmake -f manual/CMakeFiles/docs.dir/build.make manual/CMakeFiles/docs.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' gmake[2]: Nothing to be done for 'manual/CMakeFiles/docs.dir/build'. gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target docs gmake[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 0 + export LD_LIBRARY_PATH=/usr/lib64/openmpi/lib + LD_LIBRARY_PATH=/usr/lib64/openmpi/lib + export PYTHONPATH= + PYTHONPATH= + '[' openmpi = mpich ']' + '[' openmpi = openmpi ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/openmpi/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/openmpi-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/openmpi-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-x86_64 + eval $'unset MPI_COMPILER;\nunset LD_LIBRARY_PATH;\nunset MPI_MAN;\nMANPATH=\'/usr/share/man:\'; export MANPATH;\nunset MPI_INCLUDE;\nunset _LMFILES_;\nunset LOADEDMODULES;\nunset CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\':/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nunset MPI_PYTHON3_SITEARCH;\nunset MPI_HOME;\nunset MPI_FORTRAN_MOD_DIR;\nunset __MODULES_LMALTNAME;\nunset __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':1\'; export __MODULES_SHARE_MANPATH;\nunset MPI_SUFFIX;\nunset MPI_SYSCONFIG;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nunset MPI_LIB;\nPATH=\'/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nunset MPI_BIN;\ntest 0;' ++ unset MPI_COMPILER ++ unset LD_LIBRARY_PATH ++ unset MPI_MAN ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ unset CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_HOME ++ unset MPI_FORTRAN_MOD_DIR ++ unset __MODULES_LMALTNAME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + for mpi in openmpi mpich + '[' mpich = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\nLOADEDMODULES=\'\'; export LOADEDMODULES;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\nLOADEDMODULES=\'\'; export LOADEDMODULES;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ LOADEDMODULES= ++++ export LOADEDMODULES ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/mpich-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/mpich-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-x86_64 + eval $'LD_LIBRARY_PATH=\'/usr/lib64/mpich/lib\'; export LD_LIBRARY_PATH;\nMPI_COMPILER=\'mpich-x86_64\'; export MPI_COMPILER;\nMANPATH=\'/usr/share/man/mpich-x86_64:/usr/share/man:\'; export MANPATH;\nMPI_INCLUDE=\'/usr/include/mpich-x86_64\'; export MPI_INCLUDE;\nMPI_MAN=\'/usr/share/man/mpich-x86_64\'; export MPI_MAN;\nMPI_PYTHON_SITEARCH=\'%{python2_sitearch}/mpich\'; export MPI_PYTHON_SITEARCH;\n_LMFILES_=\'/usr/share/modulefiles/mpi/mpich-x86_64\'; export _LMFILES_;\nLOADEDMODULES=\'mpi/mpich-x86_64\'; export LOADEDMODULES;\nCMAKE_PREFIX_PATH=\'/usr/lib64/mpich\'; export CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\'/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nMPI_PYTHON3_SITEARCH=\'/usr/lib64/python3.14/site-packages/mpich\'; export MPI_PYTHON3_SITEARCH;\nMPI_FORTRAN_MOD_DIR=\'/usr/lib64/gfortran/modules/mpich\'; export MPI_FORTRAN_MOD_DIR;\nMPI_HOME=\'/usr/lib64/mpich\'; export MPI_HOME;\n__MODULES_LMCONFLICT=\'mpi/mpich-x86_64&mpi\'; export __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':2\'; export __MODULES_SHARE_MANPATH;\nMPI_SYSCONFIG=\'/etc/mpich-x86_64\'; export MPI_SYSCONFIG;\nMPI_SUFFIX=\'_mpich\'; export MPI_SUFFIX;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nMPI_PYTHON2_SITEARCH=\'%{python2_sitearch}/mpich\'; export MPI_PYTHON2_SITEARCH;\nMPI_LIB=\'/usr/lib64/mpich/lib\'; export MPI_LIB;\nPATH=\'/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nMPI_BIN=\'/usr/lib64/mpich/bin\'; export MPI_BIN;\ntest 0;' ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_MAN=/usr/share/man/mpich-x86_64 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ CMAKE_PREFIX_PATH=/usr/lib64/mpich ++ export CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.14/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ __MODULES_LMCONFLICT='mpi/mpich-x86_64&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=mpicc + export CC + CXX=mpicxx + export CXX + /usr/bin/cmake -S . -B build_mpich -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DCMAKE_INSTALL_FULL_SBINDIR:PATH=/usr/bin -DCMAKE_INSTALL_SBINDIR:PATH=bin -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBOUT_USE_FFTW=ON -DBOUT_USE_NETCDF=ON -DBOUT_USE_SCOREP=OFF -DBOUT_USE_SYSTEM_MPARK_VARIANT=ON -DBOUT_USE_LAPACK=ON -DBOUT_USE_NLS=ON -DBOUT_USE_SYSTEM_FMT=ON -DBOUT_USE_UUID_SYSTEM_GENERATOR=ON -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_INSTALL_LIBDIR=/usr/lib64/mpich/lib -DCMAKE_INSTALL_BINDIR=/usr/lib64/mpich/bin -DCMAKE_INSTALL_INCLUDEDIR=/usr/include/mpich-x86_64/bout++/ -DCMAKE_INSTALL_DATAROOTDIR=/usr/share -DCMAKE_INSTALL_PYTHON_SITEARCH=/usr/lib64/python3.14/site-packages/mpich -DBOUT_TEST_TIMEOUT=900 -DBOUT_BUILD_DOCS=ON -DBOUT_USE_PETSC=ON -DBOUT_USE_SUNDIALS=ON -- Configuring BOUT++ version 5.2.1 -- The CXX compiler identification is GNU 15.2.1 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/lib64/mpich/bin/mpicxx - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Python3: /usr/bin/python3.14 (found version "3.14.2") found components: Interpreter -- Could NOT find ClangFormat (missing: ClangFormat_BIN) CMake Warning (dev) at CMakeLists.txt:397 (message): 'src/field/generated_fieldops.cxx' will not be regenerated when you make changes to either 'src/field/gen_fieldops.py' or 'src/field/gen_fieldops.jinja'. This is because either Python3 or clang-format is missing (see above messages for more information) or BOUT_GENERATE_FIELDOPS is OFF (current value: OFF). This warning is only important for BOUT++ developers and can otherwise be safely ignored. This warning is for project developers. Use -Wno-dev to suppress it. -- Found Python3: /usr/bin/python3.14 (found suitable version "3.14.2", minimum required is "3.6") found components: Interpreter Development Development.Module Development.Embed -- Found Numpy: /usr/include (found version "2.3.5") -- Found Cython: TRUE (found version "3.2.1") -- Found Bash: /usr/bin/bash (found version "5.3.0") -- Building BOUT++ Python interface -- Found MPI_CXX: /usr/lib64/mpich/bin/mpicxx (found version "4.1") -- Found MPI: TRUE (found version "4.1") -- Enable OpenMP: OFF -- HYPRE support: OFF -- Found PkgConfig: /usr/bin/pkg-config (found version "2.3.0") -- Checking for one of the modules 'PETSc>3.4.0;petsc>3.4.0' -- Found PETSc: /usr/include/mpich-x86_64/petsc -- PETSc support: ON -- Using external mpark.variant -- Using external fmt CMake Deprecation Warning at externalpackages/PVODE/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- PVODE support: ON -- The C compiler identification is GNU 15.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/lib64/mpich/bin/mpicc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Found netCDF: /usr/lib64/libnetcdf.so (found version "4.9.3") -- Found netCDFCxx version 4.3.1 -- Found netCDFCxx: /usr/lib64/libnetcdf_c++4.so (found version "4.3.1") -- NetCDF support: ON -- ADIOS2 support: OFF -- Found FFTW: /usr/lib64/libfftw3.so -- FFTW support: ON -- Looking for sgemm_ -- Looking for sgemm_ - not found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Looking for sgemm_ -- Looking for sgemm_ - found -- Found BLAS: /usr/lib64/libflexiblas.so -- Looking for cheev_ -- Looking for cheev_ - found -- Found LAPACK: /usr/lib64/libflexiblas.so;-lm;-ldl -- LAPACK support: TRUE -- SLEPc support: OFF -- SUNDIALS support: ON -- Found Gettext: /usr/bin/msgmerge (found version "0.26") -- Found Intl: built in to C library -- libuuid not found, using fallback UUID generator -- UUID_SYSTEM_GENERATOR: FALSE -- Enable coverage: OFF -- Git revision: Unknown -- Performing Test HAS_FLAG__Wnull_dereference -- Performing Test HAS_FLAG__Wnull_dereference - Success -- Warning flag is supported by compiler: -Wnull-dereference -- Found negative flag: -Wno-cast-function-type replaced with -Wcast-function-type -- Performing Test HAS_FLAG__Wno_cast_function_type -- Performing Test HAS_FLAG__Wno_cast_function_type - Success -- Warning flag is supported by compiler: -Wno-cast-function-type -- Runtime checking level: CHECK=2 -- Message stack: BOUT_USE_MSGSTACK=ON -- Extra debug output: BOUT_USE_OUTPUT_DEBUG=OFF -- Signal handling: BOUT_USE_SIGNAL=ON -- Output coloring: BOUT_USE_COLOR=ON -- Field name tracking: BOUT_USE_TRACK=ON -- Signalling floating point exceptions: BOUT_USE_SIGFPE=OFF -- Enable backtrace: BOUT_USE_BACKTRACE=ON -- Performing Test HAS_PRETTY_FUNCTION -- Performing Test HAS_PRETTY_FUNCTION - Success -- Setting build type to 'RelWithDebInfo' as none was specified. -- Not building test test-laplace-hypre3d, requirement not met: BOUT_HAS_HYPRE -- Not building test test-laplacexy2-hypre, requirement not met: BOUT_HAS_HYPRE -- Not building test test-options-adios, requirement not met: BOUT_HAS_ADIOS2 -- Not building test test-slepc-solver, requirement not met: BOUT_HAS_SLEPC -- Not building test MMS-advection-arakawa, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-central, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-upwind, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-weno3, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-diffusion2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-hw, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-laplace, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-advection, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-d2dx2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-d2dz2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-diffusion, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-time, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-time-petsc, requirement not met: BOUT_RUN_ALL_TESTS -- Not building example test_laplacexy_hypre, requirement not met: BOUT_HAS_HYPRE -- Found Doxygen: /usr/bin/doxygen (found version "1.15.0") found components: doxygen dot -- Found Sphinx: /usr/bin/sphinx-build -------------------------------- BOUT++ Configuration Summary -------------------------------- Bundled PVODE support : ON PETSc support : ON SLEPc support : OFF SUNDIALS support : ON HYPRE support : OFF NetCDF support : ON ADIOS2 support : OFF FFTW support : ON LAPACK support : TRUE OpenMP support : OFF Natural language support : ON ScoreP support : OFF System UUID generator : FALSE Extra debug output : OFF Runtime error check level: 2 Signal handling : ON Output coloring : ON Field name tracking : ON Floating point exceptions: OFF Backtrace enabled : ON RAJA enabled : OFF Umpire enabled : OFF Caliper enabled : OFF CUDA enabled : OFF Metric type : 2D Python API support : ON Sanitizers enabled : None === Python === Make sure that the tools/pylib directory is in your PYTHONPATH e.g. by adding to your ~/.bashrc file export PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib:$PYTHONPATH *** Now run `cmake --build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich` to compile BOUT++ *** -- Configuring done (4.4s) -- Generating done (0.2s) CMake Warning: Manually-specified variables were not used by the project: BOUT_TEST_TIMEOUT CMAKE_CXX_FLAGS_RELEASE CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich + /usr/bin/cmake --build build_mpich -j4 --verbose Change Dir: '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend /usr/bin/gmake -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/mofiles.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/gmake -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/build gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 0%] Generating locale/es/libbout.gmo, _mo_file_es [ 2%] Generating locale/fr/libbout.gmo, _mo_file_fr [ 2%] Generating locale/de/libbout.gmo, _mo_file_de [ 2%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/fr/ cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/de/ cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o -MF CMakeFiles/pvode.dir/source/cvode.cpp.o.d -o CMakeFiles/pvode.dir/source/cvode.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/es/ cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/fr/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/fr/libbout.po cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/de/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/de/libbout.po cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/es/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/es/libbout.po [ 2%] Generating locale/zh_CN/libbout.gmo, _mo_file_zh_CN cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/zh_CN/ [ 2%] Generating locale/zh_TW/libbout.gmo, _mo_file_zh_TW cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/zh_TW/ cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/zh_CN/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/zh_CN/libbout.po cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 && /usr/bin/msgfmt -o /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/locale/zh_TW/libbout.gmo /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/locale/zh_TW/libbout.po [ 2%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o -MF CMakeFiles/pvode.dir/source/nvector.cpp.o.d -o CMakeFiles/pvode.dir/source/nvector.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp [ 2%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o -MF CMakeFiles/pvode.dir/source/llnlmath.cpp.o.d -o CMakeFiles/pvode.dir/source/llnlmath.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/llnlmath.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 2%] Built target mofiles [ 5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -MF CMakeFiles/pvode.dir/source/cvspgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvspgmr.cpp /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:429: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 429 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:485: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 485 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:543: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 543 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:565: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 565 | #pragma omp parallel for reduction(+: sum) /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:583: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 583 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:698: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 698 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:714: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 714 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:730: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 730 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:745: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 745 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:761: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 761 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:777: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 777 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:793: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 793 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:809: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 809 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:824: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 824 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:831: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 831 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:837: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 837 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:850: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 850 | #pragma omp parallel for /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp: In function ‘void pvode::N_VLinearSum(real, N_Vector, real, N_Vector, N_Vector)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:189:12: warning: unused variable ‘v’ [-Wunused-variable] 189 | N_Vector v, v1, v2; | ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp: In function ‘pvode::real pvode::N_VWL2Norm(N_Vector, N_Vector)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/nvector.cpp:533:14: warning: variable ‘N_global’ set but not used [-Wunused-but-set-variable] 533 | integer N, N_global; | ^~~~~~~~ [ 5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o -MF CMakeFiles/pvode.dir/source/spgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/spgmr.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp [ 5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o -MF CMakeFiles/pvode.dir/source/iterativ.cpp.o.d -o CMakeFiles/pvode.dir/source/iterativ.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/iterativ.cpp [ 5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o -MF CMakeFiles/pvode.dir/source/cvdiag.cpp.o.d -o CMakeFiles/pvode.dir/source/cvdiag.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvdiag.cpp /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp: In function ‘int pvode::SpgmrSolve(SpgmrMem, void*, N_Vector, N_Vector, int, int, real, int, void*, N_Vector, N_Vector, ATimesFn, PSolveFn, real*, int*, int*)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:159:8: warning: unused variable ‘s_r0_norm’ [-Wunused-variable] 159 | real s_r0_norm, beta, rotation_product, r_norm, s_product, rho; | ^~~~~~~~~ In function ‘pvode::CVnlsFunctional(pvode::CVodeMemRec*)’, inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1826:45, inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1358:18, inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:882:19: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1876:49: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized] 1876 | if ((m==maxcor) || ((m >= 2) && (del > RDIV * delp))) | ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1843:13: note: ‘delp’ was declared here 1843 | real del, delp, dcon; | ^~~~ In function ‘pvode::CVNewtonIteration(pvode::CVodeMemRec*)’, inlined from ‘pvode::CVnlsNewton(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1944:28, inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1827:41, inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1358:18, inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:882:19: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:2021:50: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized] 2021 | if ((m == maxcor) || ((m >= 2) && (del > RDIV*delp))) { | ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/cvode.cpp:1971:13: note: ‘delp’ was declared here 1971 | real del, delp, dcon; | ^~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:328:17: warning: ‘krydim’ may be used uninitialized [-Wmaybe-uninitialized] 328 | for (i=1; i <= krydim; i++) yg[i]=ZERO; | ~~^~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:161:36: note: ‘krydim’ was declared here 161 | int i, j, k, l, l_plus_1, l_max, krydim, ier, ntries; | ^~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:386:3: warning: ‘rho’ may be used uninitialized [-Wmaybe-uninitialized] 386 | if (rho < beta) { | ^~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/spgmr.cpp:159:62: note: ‘rho’ was declared here 159 | real s_r0_norm, beta, rotation_product, r_norm, s_product, rho; | ^~~ [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o -MF CMakeFiles/pvode.dir/source/smalldense.cpp.o.d -o CMakeFiles/pvode.dir/source/smalldense.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/smalldense.cpp /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/smalldense.cpp: In function ‘pvode::integer pvode::gefa(real**, integer, integer*)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/source/smalldense.cpp:82:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 82 | if (swap = (l != k)) { | ~~~~~^~~~~~~~~~ [ 8%] Linking CXX shared library ../../lib/libpvode.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvode.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,--dependency-file=CMakeFiles/pvode.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvode.so.1.0.0 -o ../../lib/libpvode.so.1.0.0 CMakeFiles/pvode.dir/source/cvode.cpp.o CMakeFiles/pvode.dir/source/nvector.cpp.o CMakeFiles/pvode.dir/source/llnlmath.cpp.o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o CMakeFiles/pvode.dir/source/spgmr.cpp.o CMakeFiles/pvode.dir/source/iterativ.cpp.o CMakeFiles/pvode.dir/source/cvdiag.cpp.o CMakeFiles/pvode.dir/source/smalldense.cpp.o -Wl,-rpath,::::::::::::::::::::::::: cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 8%] Built target pvode /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -MF CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o.d -o CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/precon/pvbbdpre.cpp [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o -MF CMakeFiles/pvpre.dir/precon/band.cpp.o.d -o CMakeFiles/pvpre.dir/precon/band.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/precon/band.cpp [ 10%] Linking CXX shared library ../../lib/libpvpre.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvpre.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,--dependency-file=CMakeFiles/pvpre.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvpre.so.1.0.0 -o ../../lib/libpvpre.so.1.0.0 CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o CMakeFiles/pvpre.dir/precon/band.cpp.o -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib: ../../lib/libpvode.so.1.0.0 cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 10%] Built target pvpre /usr/bin/gmake -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 10%] Generating bout++-time.cxx /usr/bin/cmake -P /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/cmake/GenerateDateTimeFile.cmake cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/gmake -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 13%] Building CXX object CMakeFiles/bout++.dir/src/bout++.cxx.o [ 13%] Building CXX object CMakeFiles/bout++.dir/src/field/field2d.cxx.o [ 13%] Building CXX object CMakeFiles/bout++.dir/src/field/field.cxx.o [ 13%] Building CXX object CMakeFiles/bout++.dir/src/field/field3d.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/bout++.cxx.o -MF CMakeFiles/bout++.dir/src/bout++.cxx.o.d -o CMakeFiles/bout++.dir/src/bout++.cxx.o -c 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_factory.cxx [ 43%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_region.cxx [ 43%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx [ 43%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/coordinates.cxx /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In function ‘void verifyNumPoints(BoundaryRegion*, int)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:80:21: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 80 | if (mesh->firstY()) { | ~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field_factory.hxx:32, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/boundary_standard.hxx:9, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:1: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/mesh.hxx:437:66: note: declared here 437 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:83:20: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 83 | if (mesh->lastY()) { | ~~~~~~~~~~~^~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/mesh.hxx:441:65: note: declared here 441 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:473:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 473 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 | t); | ~~ In file included from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field_data.hxx:50, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field.hxx:39, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/field2d.hxx:35, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/boundary_op.hxx:9, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/boundary_standard.hxx:6: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:517:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 517 | val = fg->generate(xnorm, TWOPI * ynorm, | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 518 | TWOPI * (zk - 0.5) / (mesh->LocalNz), t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O3::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:978:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 978 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 979 | t); | ~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O4::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:1444:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 1444 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1445 | t); | ~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryNeumann::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/boundary_standard.cxx:2152:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 2152 | val = fg->generate(xnorm, TWOPI * ynorm, | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 2153 | TWOPI * (zk - 0.5) / (mesh->LocalNz), t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ [ 43%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection 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-I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/difops.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/difops.cxx [ 45%] Building CXX object CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/fv_ops.cxx [ 48%] Building CXX object CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/impls/bout/boutmesh.cxx [ 48%] Building CXX object CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/mesh/index_derivs.cxx [ 48%] Building CXX object 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-I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o -MF CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/boutexception.cxx [ 81%] Building CXX object CMakeFiles/bout++.dir/src/sys/derivs.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -MF CMakeFiles/bout++.dir/src/sys/derivs.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/derivs.cxx [ 81%] Building CXX object CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -MF CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx [ 81%] Building CXX object CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -MF CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/generator_context.cxx /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx: In member function ‘virtual double FieldGenerator::generate(const bout::generator::Context&)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx:43:18: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 43 | return generate(ctx.x(), ctx.y(), ctx.z(), ctx.t()); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/expressionparser.cxx:25: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/sys/expressionparser.hxx:69:3: note: declared here 69 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ [ 81%] Building CXX object CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables 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CMakeFiles/bout++.dir/src/sys/options/options_io.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_io.cxx [ 86%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_netcdf.cxx [ 86%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_adios.cxx.o.d -o 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-I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o -MF CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/optionsreader.cxx In file included from /usr/include/mpich-x86_64/ncFile.h:2, from /usr/include/mpich-x86_64/netcdf:16, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_netcdf.hxx:22, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_io.cxx:7: /usr/include/mpich-x86_64/ncGroup.h:18:14: warning: ‘netCDF::file_id’ defined but not used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ In file included from /usr/include/mpich-x86_64/ncFile.h:2, from /usr/include/mpich-x86_64/netcdf:16, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_netcdf.hxx:22, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/options/options_netcdf.cxx:5: /usr/include/mpich-x86_64/ncGroup.h:18:14: warning: ‘netCDF::file_id’ defined but not used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ [ 86%] Building CXX object CMakeFiles/bout++.dir/src/sys/output.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/output.cxx.o -MF CMakeFiles/bout++.dir/src/sys/output.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/output.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/sys/output.cxx [ 89%] Building CXX object CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o /usr/lib64/mpich/bin/mpicxx 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/usr/include/c++/15/bits/shared_ptr_base.h:1719:14, inlined from ‘__ct ’ at /usr/include/c++/15/bits/shared_ptr.h:463:59, inlined from ‘make_shared’ at /usr/include/c++/15/bits/shared_ptr.h:1008:39, inlined from ‘get’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/array.hxx:428:38, inlined from ‘reallocate’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/array.hxx:226:14, inlined from ‘__ct_base ’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/src/invert/laplace/impls/spt/spt.cxx:68:21: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/array.hxx:75:12: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 75 | data = new T[len]; | ^ /usr/include/c++/15/new: In member function ‘__ct_base ’: /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ als_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 /usr/bin/cmake -E cmake_symlink_library lib/libbout++.so.5.2.0 lib/libbout++.so.5.2.0 lib/libbout++.so gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 91%] Built target bout++ /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 91%] Generating resolve_enum.pxd [ 91%] Generating helper.cxx [ 94%] Generating boutcpp.pxd [ 94%] Generating boutpp.pyx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.14 generate.py helper.cxx.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/helper.cxx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.14 generate.py resolve_enum.pxd.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/resolve_enum.pxd cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.14 generate.py boutcpp.pxd.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/boutcpp.pxd cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.14 generate.py boutpp.pyx.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/boutpp.pyx [ 94%] Generating helper.h cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.14 generate.py helper.h.jinja /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/helper.h [ 94%] Generating libboutpp.cpp cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy boutpp.pyx libboutpp.pyx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/python3.14 -m cython libboutpp.pyx --cplus -3 -X binding=True -X embedsignature=True warning: resolve_enum.pxd:49:21: 'deflt' redeclared warning: resolve_enum.pxd:189:24: 'Standard' redeclared warning: resolve_enum.pxd:223:15: 'Standard' redeclared performance hint: libboutpp.pyx:2149:0: Exception check on 'callback' will always require the GIL to be acquired. Possible solutions: 1. Declare 'callback' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'callback' to allow an error code to be returned. cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 94%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/libboutpp.cpp.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_314_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build -I/usr/include/python3.14 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/libboutpp.cpp.o -MF CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/libboutpp.cpp.o.d -o CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/libboutpp.cpp.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp [ 97%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/helper.cxx.o [ 97%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/boutexception_helper.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_314_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build -I/usr/include/python3.14 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/boutexception_helper.cxx.o -MF CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/boutexception_helper.cxx.o.d -o CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/boutexception_helper.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/boutexception_helper.cxx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_314_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build -I/usr/include/python3.14 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/helper.cxx.o -MF CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/helper.cxx.o.d -o CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/helper.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/helper.cxx In file included from /usr/include/python3.14/pyconfig.h:6, from /usr/include/python3.14/Python.h:14, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/boutexception_helper.cxx:2: /usr/include/python3.14/pyconfig-64.h:2007:9: warning: ‘_POSIX_C_SOURCE’ redefined 2007 | #define _POSIX_C_SOURCE 200809L | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/15/x86_64-redhat-linux/bits/c++config.h:2641, from /usr/include/c++/15/bits/version.h:51, from /usr/include/c++/15/compare:38, from /usr/include/c++/15/array:40, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include/bout/boutexception.hxx:6, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/boutexception_helper.cxx:1: /usr/include/features.h:319:10: note: this is the location of the previous definition 319 | # define _POSIX_C_SOURCE 202405L | ^~~~~~~~~~~~~~~ /usr/include/python3.14/pyconfig-64.h:2043:9: warning: ‘_XOPEN_SOURCE’ redefined 2043 | #define _XOPEN_SOURCE 700 | ^~~~~~~~~~~~~ /usr/include/features.h:234:10: note: this is the location of the previous definition 234 | # define _XOPEN_SOURCE 800 | ^~~~~~~~~~~~~ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:37683:46: warning: ‘__pyx_obj_9libboutpp_Vector2D* __pyx_f_9libboutpp_v2dFromObj(Vector2D)’ defined but not used [-Wunused-function] 37683 | static struct __pyx_obj_9libboutpp_Vector2D *__pyx_f_9libboutpp_v2dFromObj(Vector2D __pyx_v_i) { | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 97%] Linking CXX shared library libboutpp.cpython-314-x86_64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E cmake_link_script CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,--dependency-file=CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libboutpp.cpython-314-x86_64-linux-gnu.so -o libboutpp.cpython-314-x86_64-linux-gnu.so "CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/libboutpp.cpp.o" "CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/helper.cxx.o" "CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/boutexception_helper.cxx.o" -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib: ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 97%] Built target boutpp.cpython-314-x86_64-linux-gnu /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Building python interface cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpython-314-x86_64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-314-x86_64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/../boutpp/__init__.py gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target boutpp gmake[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 0 + PYPA= + LDPA=/usr/lib64/mpich/lib ++ pwd + export PYTHONPATH=:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/ + PYTHONPATH=:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/ ++ pwd + export LD_LIBRARY_PATH=/usr/lib64/mpich/lib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib/ + LD_LIBRARY_PATH=/usr/lib64/mpich/lib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib/ + /usr/bin/cmake --build build_mpich/manual -j4 --verbose Change Dir: '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual//CMakeFiles/progress.marks cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/gmake -f CMakeFiles/Makefile2 manual/all gmake[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/gmake -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/CMakeFiles/sphinx-html.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/gmake -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Generating HTML documentation with Sphinx in /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/docs cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual && /usr/bin/sphinx-build -b html /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/docs Running Sphinx v8.2.3 breathe module not installed recommonmark module not installed loading translations [en]... done making output directory... done Converting `source_suffix = ['.rst', '.md']` to `source_suffix = {'.rst': 'restructuredtext', '.md': 'restructuredtext'}`. building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 48 source files that are out of date updating environment: [new config] 48 added, 0 changed, 0 removed reading sources... [ 2%] _apidoc/boutdata reading sources... [ 4%] _apidoc/boutpp reading sources... [ 6%] _apidoc/boututils No mlab available reading sources... [ 8%] _apidoc/zoidberg reading sources... [ 10%] api_reference reading sources... [ 12%] developer_docs/code_layout reading sources... [ 15%] developer_docs/contributing reading sources... [ 17%] developer_docs/data_types reading sources... [ 19%] developer_docs/debugging reading sources... [ 21%] developer_docs/file_io reading sources... [ 23%] developer_docs/git_basics reading sources... [ 25%] developer_docs/mesh reading sources... [ 27%] developer_docs/natural_language reading sources... [ 29%] developer_docs/performance_profiling reading sources... [ 31%] developer_docs/petsc_interface reading sources... [ 33%] index reading sources... [ 35%] user_docs/BOUT_Gradperp_op reading sources... [ 38%] user_docs/adios2 reading sources... [ 40%] user_docs/advanced_install reading sources... [ 42%] user_docs/algebraic_operators reading sources... [ 44%] user_docs/boundary_options reading sources... [ 46%] user_docs/bout_functions_for_physics reading sources... [ 48%] user_docs/bout_options reading sources... [ 50%] user_docs/coordinates reading sources... [ 52%] user_docs/differential_operators reading sources... [ 54%] user_docs/eigenvalue_solver reading sources... [ 56%] user_docs/gpu_support reading sources... [ 58%] user_docs/input_grids reading sources... [ 60%] user_docs/installing reading sources... [ 62%] user_docs/introduction reading sources... [ 65%] user_docs/invertable_operator reading sources... [ 67%] user_docs/laplacian reading sources... [ 69%] user_docs/makefiles reading sources... [ 71%] user_docs/new_in_v5 reading sources... [ 73%] user_docs/nonlocal reading sources... [ 75%] user_docs/output_and_post reading sources... [ 77%] user_docs/parallel-transforms reading sources... [ 79%] user_docs/petsc reading sources... [ 81%] user_docs/physics_models reading sources... [ 83%] user_docs/preconditioning reading sources... [ 85%] user_docs/python reading sources... [ 88%] user_docs/python_boutpp reading sources... [ 90%] user_docs/quickstart reading sources... [ 92%] user_docs/running_bout reading sources... [ 94%] user_docs/staggered_grids reading sources... [ 96%] user_docs/testing reading sources... [ 98%] user_docs/time_integration reading sources... [100%] user_docs/variable_init WARNING: autodoc: failed to import module 'cbdtoeqdsk' from module 'boutdata'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boutdata.cbdtoeqdsk'\n"] [autodoc.import_object] /usr/lib/python3.14/site-packages/boutdata/collect.py:docstring of boutdata.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :no-index: for one of them WARNING: autodoc: failed to import module 'gen_surface' from module 'boutdata'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boutdata.gen_surface'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'input' from module 'boutdata'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boutdata.input'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'mayavi2' from module 'boutdata'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boutdata.mayavi2'\n"] [autodoc.import_object] /usr/lib/python3.14/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:5: ERROR: Unexpected indentation. [docutils] /usr/lib/python3.14/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:6: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils] WARNING: autodoc: failed to import module 'settings' from module 'boutdata'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boutdata.settings'\n"] [autodoc.import_object] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/boutpp/__init__.py:docstring of libboutpp.Laplacian:6: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/boutpp/__init__.py:docstring of libboutpp.PhysicsModel:14: ERROR: Unexpected indentation. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/boutpp/__init__.py:docstring of libboutpp.create3D:3: ERROR: Unexpected indentation. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/boutpp/__init__.py:docstring of libboutpp.Laplacian:6: ERROR: Unknown target name: "abla". [docutils] WARNING: autodoc: failed to import module 'analyse_equil_2' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.analyse_equil_2'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'anim' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/anim.py", line 19, in \n from tvtk.tools import visual\n', "ModuleNotFoundError: No module named 'tvtk'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'ask' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.ask'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'boutgrid' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/boutgrid.py", line 3, in \n from tvtk.api import tvtk\n', "ModuleNotFoundError: No module named 'tvtk'\n"] [autodoc.import_object] /usr/lib/python3.14/site-packages/boututils/calculus.py:docstring of boututils.calculus.deriv2D:14: ERROR: Unexpected indentation. [docutils] WARNING: autodoc: failed to import module 'closest_line' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.closest_line'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'crosslines' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.crosslines'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'efit_analyzer' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.efit_analyzer'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'fft_deriv' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.fft_deriv'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'file_import' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.file_import'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'geqdsk' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.geqdsk'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'idl_tabulate' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.idl_tabulate'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'int_func' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/int_func.py", line 4, in \n from past.utils import old_div\n', "ModuleNotFoundError: No module named 'past'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'local_min_max' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.local_min_max'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'mode_structure' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/mode_structure.py", line 4, in \n from past.utils import old_div\n', "ModuleNotFoundError: No module named 'past'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'moment_xyzt' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/moment_xyzt.py", line 2, in \n from past.utils import old_div\n', "ModuleNotFoundError: No module named 'past'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'options' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.options'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'radial_grid' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.radial_grid'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'read_geqdsk' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.read_geqdsk'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'spectrogram' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/spectrogram.py", line 10, in \n from scipy import fftpack, pi\n', "ImportError: cannot import name 'pi' from 'scipy' (/usr/lib64/python3.14/site-packages/scipy/__init__.py)\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'surface_average' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/surface_average.py", line 5, in \n from past.utils import old_div\n', "ModuleNotFoundError: No module named 'past'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'volume_integral' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n module = importlib.import_module(modname)\n', ' File "/usr/lib64/python3.14/importlib/__init__.py", line 88, in import_module\n return _bootstrap._gcd_import(name[level:], package, level)\n ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', ' File "", line 1398, in _gcd_import\n', ' File "", line 1371, in _find_and_load\n', ' File "", line 1342, in _find_and_load_unlocked\n', ' File "", line 938, in _load_unlocked\n', ' File "", line 759, in exec_module\n', ' File "", line 491, in _call_with_frames_removed\n', ' File "/usr/lib/python3.14/site-packages/boututils/volume_integral.py", line 4, in \n from past.utils import old_div\n', "ModuleNotFoundError: No module named 'past'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'watch' from module 'boututils'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3.14/site-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'boututils.watch'\n"] [autodoc.import_object] /usr/lib/python3.14/site-packages/zoidberg/field.py:docstring of zoidberg.field.DommaschkPotentials:3: ERROR: Unexpected indentation. [docutils] /usr/lib/python3.14/site-packages/zoidberg/field.py:docstring of zoidberg.field.MagneticField.attributes:1: WARNING: duplicate object description of zoidberg.field.MagneticField.attributes, other instance in _apidoc/zoidberg, use :no-index: for one of them /usr/lib/python3.14/site-packages/zoidberg/field.py:docstring of zoidberg.field.MagneticField.boundary:1: WARNING: duplicate object description of zoidberg.field.MagneticField.boundary, other instance in _apidoc/zoidberg, use :no-index: for one of them /usr/lib/python3.14/site-packages/zoidberg/field.py:docstring of zoidberg.field.RotatingEllipse:3: ERROR: Unexpected indentation. [docutils] /usr/lib/python3.14/site-packages/zoidberg/field.py:docstring of zoidberg.field.RotatingEllipse.coil:3: ERROR: Unexpected indentation. [docutils] looking for now-outdated files... /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/api_reference.rst:4: WARNING: toctree glob pattern '_breathe_autogen/*' didn't match any documents /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/file_io.rst:114: ERROR: Unknown interpreted text role "py". [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/performance_profiling.rst:85: WARNING: Inline literal start-string without end-string. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/boundary_options.rst:120: WARNING: Footnote [#] is not referenced. [ref.footnote] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:400: WARNING: Title underline too short. Working with an active ``conda`` environment ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:400: WARNING: Title underline too short. Working with an active ``conda`` environment ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:406: ERROR: Unexpected indentation. [docutils] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/installing.rst:407: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils] /usr/lib/python3.14/site-packages/boututils/__init__.py:docstring of boututils:1: WARNING: duplicate object description of boututils, other instance in _apidoc/boututils, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boutdata:1: WARNING: duplicate object description of boutdata, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.boutarray.BoutArray:1: WARNING: duplicate object description of boutdata.BoutArray, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.boutarray.BoutArray.dims_from_type:1: WARNING: duplicate object description of boutdata.BoutArray.dims_from_type, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.boutarray.BoutArray.get_dims_type:1: WARNING: duplicate object description of boutdata.BoutArray.get_dims_type, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.boutarray.BoutArray.type_from_dims:1: WARNING: duplicate object description of boutdata.BoutArray.type_from_dims, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.boutwarnings.alwayswarn:1: WARNING: duplicate object description of boutdata.alwayswarn, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boutdata.collect.attributes:1: WARNING: duplicate object description of boutdata.attributes, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.build_and_log:1: WARNING: duplicate object description of boutdata.build_and_log, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boutdata.collect.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.determineNumberOfCPUs:1: WARNING: duplicate object description of boutdata.determineNumberOfCPUs, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.launch:1: WARNING: duplicate object description of boutdata.launch, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.launch_safe:1: WARNING: duplicate object description of boutdata.launch_safe, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.shell:1: WARNING: duplicate object description of boutdata.shell, other instance in _apidoc/boutdata, use :no-index: for one of them /usr/lib/python3.14/site-packages/boutdata/__init__.py:docstring of boututils.run_wrapper.shell_safe:1: WARNING: duplicate object description of boutdata.shell_safe, other instance in _apidoc/boutdata, use :no-index: for one of them /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/running_bout.rst:462: WARNING: Literal block expected; none found. [docutils] none found pickling environment... done checking consistency... done preparing documents... WARNING: unsupported theme option 'repository_url' given WARNING: unsupported theme option 'repository_branch' given WARNING: unsupported theme option 'path_to_docs' given WARNING: unsupported theme option 'use_edit_page_button' given WARNING: unsupported theme option 'use_repository_button' given WARNING: unsupported theme option 'use_issues_button' given WARNING: unsupported theme option 'home_page_in_toc' given done copying assets... copying static files... Writing evaluated template result to /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/docs/_static/language_data.js Writing evaluated template result to /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/docs/_static/documentation_options.js Writing evaluated template result to /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/docs/_static/basic.css Writing evaluated template result to /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/docs/_static/sphinxdoc.css copying static files: done copying extra files... copying extra files: done copying assets: done writing output... [ 2%] _apidoc/boutdata writing output... [ 4%] _apidoc/boutpp writing output... [ 6%] _apidoc/boututils writing output... [ 8%] _apidoc/zoidberg writing output... [ 10%] api_reference writing output... [ 12%] developer_docs/code_layout writing output... [ 15%] developer_docs/contributing writing output... [ 17%] developer_docs/data_types writing output... [ 19%] developer_docs/debugging writing output... [ 21%] developer_docs/file_io writing output... [ 23%] developer_docs/git_basics writing output... [ 25%] developer_docs/mesh writing output... [ 27%] developer_docs/natural_language writing output... [ 29%] developer_docs/performance_profiling writing output... [ 31%] developer_docs/petsc_interface writing output... [ 33%] index writing output... [ 35%] user_docs/BOUT_Gradperp_op writing output... [ 38%] user_docs/adios2 writing output... [ 40%] user_docs/advanced_install writing output... [ 42%] user_docs/algebraic_operators writing output... [ 44%] user_docs/boundary_options writing output... [ 46%] user_docs/bout_functions_for_physics writing output... [ 48%] user_docs/bout_options writing output... [ 50%] user_docs/coordinates writing output... [ 52%] user_docs/differential_operators writing output... [ 54%] user_docs/eigenvalue_solver writing output... [ 56%] user_docs/gpu_support writing output... [ 58%] user_docs/input_grids writing output... [ 60%] user_docs/installing writing output... [ 62%] user_docs/introduction writing output... [ 65%] user_docs/invertable_operator writing output... [ 67%] user_docs/laplacian writing output... [ 69%] user_docs/makefiles writing output... [ 71%] user_docs/new_in_v5 writing output... [ 73%] user_docs/nonlocal writing output... [ 75%] user_docs/output_and_post writing output... [ 77%] user_docs/parallel-transforms writing output... [ 79%] user_docs/petsc writing output... [ 81%] user_docs/physics_models writing output... [ 83%] user_docs/preconditioning writing output... [ 85%] user_docs/python writing output... [ 88%] user_docs/python_boutpp writing output... [ 90%] user_docs/quickstart writing output... [ 92%] user_docs/running_bout writing output... [ 94%] user_docs/staggered_grids writing output... [ 96%] user_docs/testing writing output... [ 98%] user_docs/time_integration writing output... [100%] user_docs/variable_init /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:81: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:87: WARNING: unknown document: '../_breathe_autogen/file/field2d_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:93: WARNING: unknown document: '../_breathe_autogen/file/field3d_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:100: WARNING: unknown document: '../_breathe_autogen/file/field__data_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:105: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:112: WARNING: unknown document: '../_breathe_autogen/file/initialprofiles_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: '../_breathe_autogen/file/vecops_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:124: WARNING: unknown document: '../_breathe_autogen/file/vector2d_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:129: WARNING: unknown document: '../_breathe_autogen/file/vector3d_8cxx' [ref.doc] 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/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:195: WARNING: unknown document: '../_breathe_autogen/file/boundary__region_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:200: WARNING: unknown document: '../_breathe_autogen/file/boundary__standard_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:209: WARNING: unknown document: '../_breathe_autogen/file/interpolation_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:212: WARNING: unknown document: '../_breathe_autogen/file/mesh_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:220: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:224: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:228: WARNING: unknown document: '../_breathe_autogen/file/gyro__average_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:231: WARNING: unknown document: '../_breathe_autogen/file/smoothing_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:234: WARNING: unknown document: '../_breathe_autogen/file/sourcex_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:240: WARNING: unknown document: '../_breathe_autogen/file/solver_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:247: WARNING: unknown document: '../_breathe_autogen/file/cvode_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:251: WARNING: unknown document: '../_breathe_autogen/file/cvode_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:255: WARNING: unknown document: '../_breathe_autogen/file/ida_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:259: WARNING: unknown document: '../_breathe_autogen/file/ida_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:263: WARNING: unknown document: '../_breathe_autogen/file/petsc_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:266: WARNING: unknown document: '../_breathe_autogen/file/petsc_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:270: WARNING: unknown document: '../_breathe_autogen/file/pvode_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:274: WARNING: unknown document: '../_breathe_autogen/file/pvode_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:278: WARNING: unknown document: '../_breathe_autogen/file/boutcomm_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:280: WARNING: unknown document: '../_breathe_autogen/file/boutexception_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:289: WARNING: unknown document: '../_breathe_autogen/file/msg__stack_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:296: WARNING: unknown document: '../_breathe_autogen/file/options_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:300: WARNING: unknown document: '../_breathe_autogen/file/optionsreader_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:302: WARNING: unknown document: '../_breathe_autogen/file/output_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:304: WARNING: unknown document: '../_breathe_autogen/file/range_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:308: WARNING: unknown document: '../_breathe_autogen/file/timer_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:312: WARNING: unknown document: '../_breathe_autogen/file/utils_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:318: WARNING: unknown document: '../_breathe_autogen/file/optionparser_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:320: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/code_layout.rst:322: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/developer_docs/mesh.rst:31: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field2d_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field3d_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8hxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: '&' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: '|' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: 'false' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:139: WARNING: Unparseable C++ cross-reference: 'true' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:153: WARNING: Unparseable C++ cross-reference: '>' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] > ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] > ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] > ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:153: WARNING: Unparseable C++ cross-reference: '<' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] < ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] < ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] < ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:163: WARNING: Unparseable C++ cross-reference: 'true' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:163: WARNING: Unparseable C++ cross-reference: 'false' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: 'true' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: true [error at 4] true ----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: 'false' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name, got keyword: false [error at 5] false -----^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: '&' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] & ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/bout_options.rst:168: WARNING: Unparseable C++ cross-reference: '|' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ If the function has a return type: Invalid C++ declaration: Expected identifier in nested name. [error at 0] | ^ /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/differential_operators.rst:530: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/differential_operators.rst:538: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/laplacian.rst:185: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx' [ref.doc] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/output_and_post.rst:580: WARNING: Lexing literal_block 'AppendTo[$Path,"/full/path/to/BOUT/tools/mathematicalib"]' as "mathematica" resulted in an error at token: '$'. Retrying in relaxed mode. [misc.highlighting_failure] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/physics_models.rst:31: WARNING: undefined label: 'sec-cmake' [ref.ref] /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual/sphinx/user_docs/time_integration.rst:1087: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx' [ref.doc] generating indices... genindex py-modindex done writing additional pages... search done copying images... [ 4%] figs/layout1.png copying images... [ 8%] figs/layout2.png copying images... [ 12%] figs/memory.png copying images... [ 15%] figs/petsc_interface_overview.png copying images... [ 19%] figs/operator_stencil_uml.png copying images... [ 23%] figs/petsc_vector_set.png copying images... [ 27%] figs/fluid_norm_mc.png copying images... [ 31%] figs/diffStencils.png copying images... [ 35%] figs/topology_cross_section.svg copying images... [ 38%] figs/topology_schematic.svg copying images... 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The HTML pages are in docs. cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual && /usr/bin/cmake -E echo Generated\ HTML\ docs\ in\ file:///builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/docs/index.html Generated HTML docs in file:///builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/docs/index.html gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target sphinx-html /usr/bin/gmake -f manual/CMakeFiles/docs.dir/build.make manual/CMakeFiles/docs.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/manual/CMakeFiles/docs.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/gmake -f manual/CMakeFiles/docs.dir/build.make manual/CMakeFiles/docs.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' gmake[2]: Nothing to be done for 'manual/CMakeFiles/docs.dir/build'. gmake[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target docs gmake[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 0 + export LD_LIBRARY_PATH=/usr/lib64/mpich/lib + LD_LIBRARY_PATH=/usr/lib64/mpich/lib + export PYTHONPATH= + PYTHONPATH= + '[' mpich = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/mpich/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/mpich/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/mpich-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/mpich-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-x86_64 + eval $'unset LD_LIBRARY_PATH;\nunset MPI_COMPILER;\nMANPATH=\'/usr/share/man:\'; export MANPATH;\nunset MPI_INCLUDE;\nunset MPI_MAN;\nunset MPI_PYTHON_SITEARCH;\nunset _LMFILES_;\nunset LOADEDMODULES;\nunset CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\':/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nunset MPI_PYTHON3_SITEARCH;\nunset MPI_FORTRAN_MOD_DIR;\nunset MPI_HOME;\nunset __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':1\'; export __MODULES_SHARE_MANPATH;\nunset MPI_SYSCONFIG;\nunset MPI_SUFFIX;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nunset MPI_PYTHON2_SITEARCH;\nunset MPI_LIB;\nPATH=\'/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nunset MPI_BIN;\ntest 0;' ++ unset LD_LIBRARY_PATH ++ unset MPI_COMPILER ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ unset CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SYSCONFIG ++ unset MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.gNYp43 + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0-build + '[' /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT ++ dirname /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT + mkdir -p /builddir/build/BUILD/bout++-5.2.0-build + mkdir /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BOUT++-v5.2.0 + for mpi in openmpi mpich + '[' openmpi = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/openmpi-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/openmpi-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-x86_64 + eval $'MPI_COMPILER=\'openmpi-x86_64\'; export MPI_COMPILER;\nLD_LIBRARY_PATH=\'/usr/lib64/openmpi/lib\'; export LD_LIBRARY_PATH;\nMPI_MAN=\'/usr/share/man/openmpi-x86_64\'; export MPI_MAN;\nMANPATH=\'/usr/share/man/openmpi-x86_64:/usr/share/man:\'; export MANPATH;\nMPI_INCLUDE=\'/usr/include/openmpi-x86_64\'; export MPI_INCLUDE;\n_LMFILES_=\'/usr/share/modulefiles/mpi/openmpi-x86_64\'; export _LMFILES_;\nLOADEDMODULES=\'mpi/openmpi-x86_64\'; export LOADEDMODULES;\nCMAKE_PREFIX_PATH=\'/usr/lib64/openmpi\'; export CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\'/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nMPI_PYTHON3_SITEARCH=\'/usr/lib64/python3.14/site-packages/openmpi\'; export MPI_PYTHON3_SITEARCH;\nMPI_HOME=\'/usr/lib64/openmpi\'; export MPI_HOME;\nMPI_FORTRAN_MOD_DIR=\'/usr/lib64/gfortran/modules/openmpi\'; export MPI_FORTRAN_MOD_DIR;\n__MODULES_LMALTNAME=\'mpi/openmpi-x86_64&as|mpi/default&as|mpi/latest\'; export __MODULES_LMALTNAME;\n__MODULES_LMCONFLICT=\'mpi/openmpi-x86_64&mpi\'; export __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':2\'; export __MODULES_SHARE_MANPATH;\nMPI_SUFFIX=\'_openmpi\'; export MPI_SUFFIX;\nMPI_SYSCONFIG=\'/etc/openmpi-x86_64\'; export MPI_SYSCONFIG;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nMPI_LIB=\'/usr/lib64/openmpi/lib\'; export MPI_LIB;\nPATH=\'/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nMPI_BIN=\'/usr/lib64/openmpi/bin\'; export MPI_BIN;\ntest 0;' ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ CMAKE_PREFIX_PATH=/usr/lib64/openmpi ++ export CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.14/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ __MODULES_LMALTNAME='mpi/openmpi-x86_64&as|mpi/default&as|mpi/latest' ++ export __MODULES_LMALTNAME ++ __MODULES_LMCONFLICT='mpi/openmpi-x86_64&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + DESTDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT + /usr/bin/cmake --install build_openmpi -- Install configuration: "RelWithDebInfo" -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14/site-packages/openmpi/boutpp/libboutpp.cpython-314-x86_64-linux-gnu.so -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14/site-packages/openmpi/boutpp/libboutpp.cpython-314-x86_64-linux-gnu.so" to "/usr//usr/lib64/openmpi/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14/site-packages/openmpi/boutpp/__init__.py -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libpvode.so.1.0.0 -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libpvode.so.1.0.0" to "/usr//usr/lib64/openmpi/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libpvode.so -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libpvpre.so.1.0.0 -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libpvpre.so.1.0.0" to "/usr//usr/lib64/openmpi/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libpvpre.so -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++ -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/vector.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/spgmr.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/smalldense.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/pvbbdpre.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/nvector.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/llnltyps.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/llnlmath.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/iterativ.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/cvspgmr.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/cvode.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/cvdiag.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/pvode/band.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/PVODE/PVODEConfig.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/cmake/PVODE/PVODEConfig-relwithdebinfo.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/es/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/de/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/fr/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/zh_CN/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/zh_TW/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libbout++.so.5.2.0 -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libbout++.so.5.2.0" to "/usr//usr/lib64/openmpi/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/openmpi/lib/libbout++.so -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++ -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/where.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/vector3d.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/vector2d.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/vecops.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/utils.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/unused.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/stencils.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/sourcex.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/smoothing.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/parallel_boundary_region.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/parallel_boundary_op.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/output.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/optionsreader.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/options.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/multiostream.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/msg_stack.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/mask.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/lapack_routines.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/invert_parderiv.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/invert_laplace.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/interpolation_z.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/interpolation_xz.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/interpolation.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/initialprofiles.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/gyro_average.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/globals.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/fieldperp.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/field_factory.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/field_data.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/field3d.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/field2d.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/field.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/fft.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/difops.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/derivs.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/dcomplex.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/cyclic_reduction.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/boutexception.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/boutcomm.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout_types.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/where.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/vectormetric.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/vector3d.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/vector2d.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/vecops.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/utils.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/unused.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/traits.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/template_combinations.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/sys -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/sys/variant.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/sys/uncopyable.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/sys/type_name.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/sys/timer.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/sys/range.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/sys/gettext.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/sys/generator_context.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/sys/expressionparser.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/surfaceiter.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/sundials_backports.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/stencils.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/sourcex.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/solverfactory.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/solver.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/snb.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/smoothing.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/slepclib.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/single_index_ops.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/scorepwrapper.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/rvec.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/rkscheme.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/region.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/rajalib.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/openmpi-x86_64/bout++/bout/physicsmodel.hxx -- Installing: 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/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so: RUNPATH=/usr//usr/lib64/openmpi/lib:/usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so: new RUNPATH: /usr/lib64/openmpi/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so.5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so.5.2.0: RUNPATH=/usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libbout++.so.5.2.0: new RUNPATH: /usr/lib64/openmpi/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so: RUNPATH=/usr//usr/lib64/openmpi/lib:/usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so: new RUNPATH: /usr/lib64/openmpi/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so.1.0.0 /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so.1.0.0: RUNPATH=/usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvpre.so.1.0.0: new RUNPATH: /usr/lib64/openmpi/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so: RUNPATH=/usr//usr/lib64/openmpi/lib:/usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so: new RUNPATH: /usr/lib64/openmpi/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so.1.0.0 /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so.1.0.0: RUNPATH=/usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/openmpi/lib/libpvode.so.1.0.0: new RUNPATH: /usr/lib64/openmpi/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/python3.14/site-packages/openmpi/boutpp/libboutpp.cpython-314-x86_64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/python3.14/site-packages/openmpi/boutpp/libboutpp.cpython-314-x86_64-linux-gnu.so: RUNPATH=/usr//usr/lib64/openmpi/lib:/usr/lib64/openmpi/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/python3.14/site-packages/openmpi/boutpp/libboutpp.cpython-314-x86_64-linux-gnu.so: new RUNPATH: /usr/lib64/openmpi/lib + rm -rf /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/bout++ + mkdir -p /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/modulefiles/bout++ + cat + DESTDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT + /usr/bin/cmake --install build_openmpi/manual -- Install configuration: 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/etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/openmpi/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/openmpi-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/openmpi-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-x86_64 + eval $'unset MPI_COMPILER;\nunset LD_LIBRARY_PATH;\nunset MPI_MAN;\nMANPATH=\'/usr/share/man:\'; export MANPATH;\nunset MPI_INCLUDE;\nunset _LMFILES_;\nunset LOADEDMODULES;\nunset CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\':/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nunset MPI_PYTHON3_SITEARCH;\nunset MPI_HOME;\nunset MPI_FORTRAN_MOD_DIR;\nunset __MODULES_LMALTNAME;\nunset __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':1\'; export __MODULES_SHARE_MANPATH;\nunset MPI_SUFFIX;\nunset MPI_SYSCONFIG;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nunset MPI_LIB;\nPATH=\'/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nunset MPI_BIN;\ntest 0;' ++ unset MPI_COMPILER ++ unset LD_LIBRARY_PATH ++ unset MPI_MAN ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ unset CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_HOME ++ unset MPI_FORTRAN_MOD_DIR ++ unset __MODULES_LMALTNAME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + for mpi in openmpi mpich + '[' mpich = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\nLOADEDMODULES=\'\'; export LOADEDMODULES;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\nLOADEDMODULES=\'\'; export LOADEDMODULES;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ LOADEDMODULES= ++++ export LOADEDMODULES ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/mpich-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/mpich-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-x86_64 + eval $'LD_LIBRARY_PATH=\'/usr/lib64/mpich/lib\'; export LD_LIBRARY_PATH;\nMPI_COMPILER=\'mpich-x86_64\'; export MPI_COMPILER;\nMANPATH=\'/usr/share/man/mpich-x86_64:/usr/share/man:\'; export MANPATH;\nMPI_INCLUDE=\'/usr/include/mpich-x86_64\'; export MPI_INCLUDE;\nMPI_MAN=\'/usr/share/man/mpich-x86_64\'; export MPI_MAN;\nMPI_PYTHON_SITEARCH=\'%{python2_sitearch}/mpich\'; export MPI_PYTHON_SITEARCH;\n_LMFILES_=\'/usr/share/modulefiles/mpi/mpich-x86_64\'; export _LMFILES_;\nLOADEDMODULES=\'mpi/mpich-x86_64\'; export LOADEDMODULES;\nCMAKE_PREFIX_PATH=\'/usr/lib64/mpich\'; export CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\'/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nMPI_PYTHON3_SITEARCH=\'/usr/lib64/python3.14/site-packages/mpich\'; export MPI_PYTHON3_SITEARCH;\nMPI_FORTRAN_MOD_DIR=\'/usr/lib64/gfortran/modules/mpich\'; export MPI_FORTRAN_MOD_DIR;\nMPI_HOME=\'/usr/lib64/mpich\'; export MPI_HOME;\n__MODULES_LMCONFLICT=\'mpi/mpich-x86_64&mpi\'; export __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':2\'; export __MODULES_SHARE_MANPATH;\nMPI_SYSCONFIG=\'/etc/mpich-x86_64\'; export MPI_SYSCONFIG;\nMPI_SUFFIX=\'_mpich\'; export MPI_SUFFIX;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nMPI_PYTHON2_SITEARCH=\'%{python2_sitearch}/mpich\'; export MPI_PYTHON2_SITEARCH;\nMPI_LIB=\'/usr/lib64/mpich/lib\'; export MPI_LIB;\nPATH=\'/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nMPI_BIN=\'/usr/lib64/mpich/bin\'; export MPI_BIN;\ntest 0;' ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_MAN=/usr/share/man/mpich-x86_64 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ CMAKE_PREFIX_PATH=/usr/lib64/mpich ++ export CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.14/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ __MODULES_LMCONFLICT='mpi/mpich-x86_64&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + DESTDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT + /usr/bin/cmake --install build_mpich -- Install configuration: "RelWithDebInfo" -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14/site-packages/mpich/boutpp/libboutpp.cpython-314-x86_64-linux-gnu.so -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14/site-packages/mpich/boutpp/libboutpp.cpython-314-x86_64-linux-gnu.so" to "/usr//usr/lib64/mpich/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14/site-packages/mpich/boutpp/__init__.py -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libpvode.so.1.0.0 -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libpvode.so.1.0.0" to "/usr//usr/lib64/mpich/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libpvode.so -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libpvpre.so.1.0.0 -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libpvpre.so.1.0.0" to "/usr//usr/lib64/mpich/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libpvpre.so -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++ -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/vector.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/spgmr.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/smalldense.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/pvbbdpre.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/nvector.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/llnltyps.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/llnlmath.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/iterativ.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/cvspgmr.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/cvode.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/cvdiag.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/pvode/band.h -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/PVODE/PVODEConfig.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/PVODE/PVODEConfig-relwithdebinfo.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/es/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/de/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/fr/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/zh_CN/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/locale/zh_TW/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libbout++.so.5.2.0 -- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libbout++.so.5.2.0" to "/usr//usr/lib64/mpich/lib" -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/libbout++.so -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++ -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/where.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/vector3d.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/vector2d.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/vecops.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/utils.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/unused.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/stencils.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/sourcex.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/smoothing.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/parallel_boundary_region.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/parallel_boundary_op.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/output.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/optionsreader.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/options.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/multiostream.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/msg_stack.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/mask.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/lapack_routines.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/invert_parderiv.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/invert_laplace.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/interpolation_z.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/interpolation_xz.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/interpolation.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/initialprofiles.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/gyro_average.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/globals.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/fieldperp.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/field_factory.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/field_data.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/field3d.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/field2d.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/field.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/fft.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/difops.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/derivs.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/dcomplex.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/cyclic_reduction.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/boutexception.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/boutcomm.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout_types.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/where.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/vectormetric.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/vector3d.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/vector2d.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/vecops.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/utils.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/unused.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/traits.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/template_combinations.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/variant.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/uncopyable.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/type_name.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/timer.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/range.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/gettext.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/generator_context.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sys/expressionparser.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/surfaceiter.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sundials_backports.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/stencils.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/sourcex.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/solverfactory.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/solver.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/snb.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/smoothing.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/slepclib.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/single_index_ops.hxx -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/include/mpich-x86_64/bout++/bout/scorepwrapper.hxx -- Installing: 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/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/ResolveCompilerPaths.cmake -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/mpich/lib/cmake/bout++/bout++Config.cmake ++ find /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/python3.14/site-packages/mpich ++ grep -E '/libbout|/libpvode|/libpvpre' + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so: RUNPATH=/usr//usr/lib64/mpich/lib:/usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so: new RUNPATH: /usr/lib64/mpich/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so.5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so.5.2.0: RUNPATH=/usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libbout++.so.5.2.0: new RUNPATH: /usr/lib64/mpich/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so: RUNPATH=/usr//usr/lib64/mpich/lib:/usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so: new RUNPATH: /usr/lib64/mpich/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so.1.0.0 /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so.1.0.0: RUNPATH=/usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvpre.so.1.0.0: new RUNPATH: /usr/lib64/mpich/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so: RUNPATH=/usr//usr/lib64/mpich/lib:/usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so: new RUNPATH: /usr/lib64/mpich/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so.1.0.0 /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so.1.0.0: RUNPATH=/usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/mpich/lib/libpvode.so.1.0.0: new RUNPATH: /usr/lib64/mpich/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep -E '/libbout|/libpvode|/libpvpre') + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/python3.14/site-packages/mpich/boutpp/libboutpp.cpython-314-x86_64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/python3.14/site-packages/mpich/boutpp/libboutpp.cpython-314-x86_64-linux-gnu.so: RUNPATH=/usr//usr/lib64/mpich/lib:/usr/lib64/mpich/lib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT//usr/lib64/python3.14/site-packages/mpich/boutpp/libboutpp.cpython-314-x86_64-linux-gnu.so: new RUNPATH: /usr/lib64/mpich/lib + rm -rf /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/bout++ + mkdir -p /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/modulefiles/bout++ + cat + DESTDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT + /usr/bin/cmake --install build_mpich/manual -- Install configuration: "RelWithDebInfo" -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++/ -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//objects.inv -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//searchindex.js -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/init_balloon.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/stagLocations.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/quickstart_conduction_example.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/sod_result.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/interchange_inst_test.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/snb-step.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/snb-sinusoidal.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/par_laplace.png -- Up-to-date: 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/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/topology_schematic.svg -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/topology_cross_section.svg -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/diffStencils.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/fluid_norm_mc.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/petsc_vector_set.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/operator_stencil_uml.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/petsc_interface_overview.png -- Up-to-date: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//_images/memory.png -- Up-to-date: 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/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/parallel-transforms.html -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/output_and_post.html -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/nonlocal.html -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/new_in_v5.html -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/makefiles.html -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/laplacian.html -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/invertable_operator.html -- Installing: /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++//user_docs/introduction.html -- Installing: 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LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/mpich/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/mpich/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/mpich-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/mpich-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-x86_64 + eval $'unset LD_LIBRARY_PATH;\nunset MPI_COMPILER;\nMANPATH=\'/usr/share/man:\'; export MANPATH;\nunset MPI_INCLUDE;\nunset MPI_MAN;\nunset MPI_PYTHON_SITEARCH;\nunset _LMFILES_;\nunset LOADEDMODULES;\nunset CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\':/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nunset MPI_PYTHON3_SITEARCH;\nunset MPI_FORTRAN_MOD_DIR;\nunset MPI_HOME;\nunset __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':1\'; export __MODULES_SHARE_MANPATH;\nunset MPI_SYSCONFIG;\nunset MPI_SUFFIX;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nunset MPI_PYTHON2_SITEARCH;\nunset MPI_LIB;\nPATH=\'/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nunset MPI_BIN;\ntest 0;' ++ unset LD_LIBRARY_PATH ++ unset MPI_COMPILER ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ unset CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SYSCONFIG ++ unset MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + /usr/lib/rpm/find-lang.sh /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT libbout + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 5.2.0-4.fc44 --unique-debug-suffix -5.2.0-4.fc44.x86_64 --unique-debug-src-base bout++-5.2.0-4.fc44.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 find-debuginfo: starting Extracting debug info from 8 files DWARF-compressing 8 files sepdebugcrcfix: Updated 8 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/bout++-5.2.0-4.fc44.x86_64 find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + COMPRESS='gzip -9 -n' + COMPRESS_EXT=.gz + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/lib64/mpich/bin/bout-config from /bin/sh to #!/usr/bin/sh mangling shebang in /usr/lib64/mpich/bin/bout-add-mod-path from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-archive-helper.sh from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/lib64/mpich/bin/bout-boutdata-restart-create from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-build-deps.sh from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/lib64/mpich/bin/bout-changelog-generator.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-log-color from /bin/sh to #!/usr/bin/sh mangling shebang in /usr/lib64/mpich/bin/bout-sonnet from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-stop-script from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/lib64/mpich/bin/bout-v5-factory-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-format-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-header-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-input-file-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-macro-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-physics-model-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-xzinterpolation-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout_3to4.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout_4to5 from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/lib64/mpich/bin/update_citations.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/update_version_number_in_files.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-config from /bin/sh to #!/usr/bin/sh mangling shebang in /usr/lib64/openmpi/bin/bout-add-mod-path from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-archive-helper.sh from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/lib64/openmpi/bin/bout-boutdata-restart-create from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-build-deps.sh from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/lib64/openmpi/bin/bout-changelog-generator.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-log-color from /bin/sh to #!/usr/bin/sh mangling shebang in /usr/lib64/openmpi/bin/bout-sonnet from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-stop-script from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/lib64/openmpi/bin/bout-v5-factory-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-format-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-header-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-input-file-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-macro-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-physics-model-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-xzinterpolation-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout_3to4.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout_4to5 from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/lib64/openmpi/bin/update_citations.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/update_version_number_in_files.py from /usr/bin/env python3 to #!/usr/bin/python3 + /usr/lib/rpm/brp-remove-la-files + /usr/lib/rpm/redhat/brp-python-rpm-in-distinfo + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib/debug/usr/lib64/python3.14 using python3.14 Bytecompiling .py files below /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14 using python3.14 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-det --brp -j4 /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14/site-packages/mpich/boutconfig/__pycache__/__init__.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14/site-packages/mpich/boutpp/__pycache__/__init__.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14/site-packages/openmpi/boutpp/__pycache__/__init__.cpython-314.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/lib64/python3.14/site-packages/openmpi/boutconfig/__pycache__/__init__.cpython-314.opt-1.pyc: rewriting with normalized contents Scanned 170 directories and 888 files, processed 55 inodes, 4 modified (0 replaced + 4 rewritten), 0 unsupported format, 0 errors + /usr/bin/linkdupes --brp /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr Scanned 169 directories and 888 files, considered 882 files, read 535 files, linked 311 files, 0 errors sum of sizes of linked files: 6170614 bytes Reading /builddir/build/BUILD/bout++-5.2.0-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.fnchA1 + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BOUT++-v5.2.0 + for mpi in openmpi mpich + fail=1 + '[' openmpi = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/openmpi-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/openmpi-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-x86_64 + eval $'MPI_COMPILER=\'openmpi-x86_64\'; export MPI_COMPILER;\nLD_LIBRARY_PATH=\'/usr/lib64/openmpi/lib\'; export LD_LIBRARY_PATH;\nMPI_MAN=\'/usr/share/man/openmpi-x86_64\'; export MPI_MAN;\nMANPATH=\'/usr/share/man/openmpi-x86_64:/usr/share/man:\'; export MANPATH;\nMPI_INCLUDE=\'/usr/include/openmpi-x86_64\'; export MPI_INCLUDE;\n_LMFILES_=\'/usr/share/modulefiles/mpi/openmpi-x86_64\'; export _LMFILES_;\nLOADEDMODULES=\'mpi/openmpi-x86_64\'; export LOADEDMODULES;\nCMAKE_PREFIX_PATH=\'/usr/lib64/openmpi\'; export CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\'/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nMPI_PYTHON3_SITEARCH=\'/usr/lib64/python3.14/site-packages/openmpi\'; export MPI_PYTHON3_SITEARCH;\nMPI_HOME=\'/usr/lib64/openmpi\'; export MPI_HOME;\nMPI_FORTRAN_MOD_DIR=\'/usr/lib64/gfortran/modules/openmpi\'; export MPI_FORTRAN_MOD_DIR;\n__MODULES_LMALTNAME=\'mpi/openmpi-x86_64&as|mpi/default&as|mpi/latest\'; export __MODULES_LMALTNAME;\n__MODULES_LMCONFLICT=\'mpi/openmpi-x86_64&mpi\'; export __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':2\'; export __MODULES_SHARE_MANPATH;\nMPI_SUFFIX=\'_openmpi\'; export MPI_SUFFIX;\nMPI_SYSCONFIG=\'/etc/openmpi-x86_64\'; export MPI_SYSCONFIG;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nMPI_LIB=\'/usr/lib64/openmpi/lib\'; export MPI_LIB;\nPATH=\'/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nMPI_BIN=\'/usr/lib64/openmpi/bin\'; export MPI_BIN;\ntest 0;' ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ CMAKE_PREFIX_PATH=/usr/lib64/openmpi ++ export CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.14/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ __MODULES_LMALTNAME='mpi/openmpi-x86_64&as|mpi/default&as|mpi/latest' ++ export __MODULES_LMALTNAME ++ __MODULES_LMCONFLICT='mpi/openmpi-x86_64&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ~/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi ~/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 ++ test 0 + _mlstatus=0 + return 0 + export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + pushd build_openmpi + export OMPI_MCA_rmaps_base_oversubscribe=yes + OMPI_MCA_rmaps_base_oversubscribe=yes + export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + export HDF5_USE_FILE_LOCKING=FALSE + HDF5_USE_FILE_LOCKING=FALSE + sed 's/ 3s / 30s /' tests/integrated/test-coordinates-initialization/runtest #!/bin/bash # Cores: 3 make || exit test -z $MPIRUN && MPIRUN='mpirun -np' # Kill the test after 3 seconds, if it hasn't already exited OMP_NUM_THREADS=1 $MPIRUN 3 timeout 30s ./test-coordinates-initialization e=$? if test $e -ne 0 then echo "The test failed. That can be caused by a timeout." echo "If this test is run on high load, it may fail occasionally." echo "The load is:" uptime fi exit $e + make -j4 build-check /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 build-check make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 76 make -f CMakeFiles/Makefile2 CMakeFiles/build-check.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/depend make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 0%] Building CXX object tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googletest && /usr/lib64/openmpi/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgtest_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Wundef -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o -MF CMakeFiles/gtest.dir/src/gtest-all.cc.o.d -o CMakeFiles/gtest.dir/src/gtest-all.cc.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/src/gtest-all.cc [ 0%] Creating test-fci-boundary grid file cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib: /usr/bin/python3.14 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/grid.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary/grid.fci.nc [ 2%] Built target pvode make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 3%] Built target pvpre make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 43%] Built target bout++ make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 43%] Building CXX object tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o [ 43%] Building CXX object tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d-y && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y/wave.cxx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/advection && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o -MF CMakeFiles/MMS-advection.dir/advection.cxx.o.d -o CMakeFiles/MMS-advection.dir/advection.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/advection/advection.cxx [ 43%] Linking CXX executable wave cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d-y && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d-y.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/MMS-wave-1d-y.dir/link.d "CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o" -o wave -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 43%] Built target MMS-wave-1d-y make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 43%] Building CXX object tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/diffusion && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -MF CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o.d -o CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion/diffusion.cxx [ 43%] Linking CXX executable advection cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/advection && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-advection.dir/link.txt --verbose=1 Making curvilinear poloidal grid creating grid... starting Bfield stuff done Bfield stuff starting Bfield stuff done Bfield stuff starting Bfield stuff done Bfield stuff WARNING: Outputting 2D metrics, discarding metric information. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/MMS-advection.dir/link.d "CMakeFiles/MMS-advection.dir/advection.cxx.o" -o advection -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 43%] Built target test-fci-boundary-grid make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/DependInfo.cmake "--color=" [ 43%] Built target MMS-advection make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 43%] Building CXX object tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/spatial/fci && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o -MF CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o.d -o CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci/fci_mms.cxx [ 43%] Building CXX object tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d/wave.cxx [ 44%] Linking CXX executable cyto cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/diffusion && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-diffusion.dir/link.txt --verbose=1 [ 44%] Linking CXX executable fci_mms cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/spatial/fci && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-spatial-fci.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/MMS-diffusion.dir/link.d "CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o" -o cyto -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 44%] Built target MMS-diffusion make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 44%] Building CXX object tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown-weights && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -MF CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o.d -o CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights/test_yupdown_weights.cxx [ 46%] Linking CXX executable wave cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/MMS-spatial-fci.dir/link.d "CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o" -o fci_mms -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../../lib/libpvpre.so.1.0.0 ../../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 46%] Built target MMS-spatial-fci make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 48%] Built target boutpp.cpython-314-x86_64-linux-gnu make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 48%] Building CXX object tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-backtrace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -MF CMakeFiles/test-backtrace.dir/boutexcept.cxx.o.d -o CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace/boutexcept.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/MMS-wave-1d.dir/link.d "CMakeFiles/MMS-wave-1d.dir/wave.cxx.o" -o wave -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 48%] Built target MMS-wave-1d make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 50%] Building CXX object tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-beuler && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o -MF CMakeFiles/test_beuler.dir/test_beuler.cxx.o.d -o CMakeFiles/test_beuler.dir/test_beuler.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler/test_beuler.cxx [ 50%] Linking CXX executable boutexcept cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-backtrace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-backtrace.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-backtrace.dir/link.d "CMakeFiles/test-backtrace.dir/boutexcept.cxx.o" -o boutexcept -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 50%] Built target test-backtrace make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 50%] Building CXX object tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-bout-override-default-option && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -MF CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o.d -o CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option/test-bout-override-default-option.cxx [ 50%] Linking CXX executable test_yupdown_weights cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown-weights && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown-weights.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-yupdown-weights.dir/link.d "CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o" -o test_yupdown_weights -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 50%] Built target test-yupdown-weights make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 50%] Building CXX object tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-command-args && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o -MF CMakeFiles/test-command-args.dir/command-args.cxx.o.d -o CMakeFiles/test-command-args.dir/command-args.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args/command-args.cxx [ 50%] Linking CXX shared library ../../../../../lib/libgtest.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_link_script CMakeFiles/gtest.dir/link.txt --verbose=1 [ 50%] Linking CXX executable command-args cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-command-args && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-command-args.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-command-args.dir/link.d "CMakeFiles/test-command-args.dir/command-args.cxx.o" -o command-args -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 50%] Built target test-command-args [ 51%] Linking CXX executable test-bout-override-default-option cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-bout-override-default-option && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-bout-override-default-option.dir/link.txt --verbose=1 [ 51%] Linking CXX executable test_beuler cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-beuler && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_beuler.dir/link.txt --verbose=1 make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-communications/CMakeFiles/test-communications.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 51%] Building CXX object tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-communications && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o -MF CMakeFiles/test-communications.dir/test-communications.cxx.o.d -o CMakeFiles/test-communications.dir/test-communications.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications/test-communications.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-bout-override-default-option.dir/link.d "CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o" -o test-bout-override-default-option -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 51%] Built target test-bout-override-default-option /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test_beuler.dir/link.d CMakeFiles/test_beuler.dir/test_beuler.cxx.o -o test_beuler -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 51%] Built target test_beuler make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 51%] Building CXX object tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-coordinates-initialization && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -MF CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o.d -o CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization/test-coordinates-initialization.cxx make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 51%] Building CXX object tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-cyclic && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -MF CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o.d -o CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic/test_cyclic.cxx [ 51%] Linking CXX executable test-coordinates-initialization cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-coordinates-initialization && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-coordinates-initialization.dir/link.txt --verbose=1 [ 52%] Linking CXX executable test-communications cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-communications && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-communications.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-coordinates-initialization.dir/link.d "CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o" -o test-coordinates-initialization -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 52%] Built target test-coordinates-initialization make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 52%] Building CXX object tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-delp2 && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o -MF CMakeFiles/test-delp2.dir/test_delp2.cxx.o.d -o CMakeFiles/test-delp2.dir/test_delp2.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2/test_delp2.cxx /usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,--dependency-file=CMakeFiles/gtest.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgtest.so.1.16.0 -o ../../../../../lib/libgtest.so.1.16.0 "CMakeFiles/gtest.dir/src/gtest-all.cc.o" cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgtest.so.1.16.0 ../../../../../lib/libgtest.so.1.16.0 ../../../../../lib/libgtest.so make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 52%] Built target gtest make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 52%] Building CXX object tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-datafilefacade && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -MF CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o.d -o CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade/test-datafile-facade.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-communications.dir/link.d "CMakeFiles/test-communications.dir/test-communications.cxx.o" -o test-communications -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 52%] Built target test-communications make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 52%] Building CXX object tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability/2fluid.cxx [ 52%] Linking CXX executable test-datafile-facade cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-datafilefacade && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-datafile-facade.dir/link.txt --verbose=1 [ 53%] Linking CXX executable test_cyclic cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-cyclic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-cyclic.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-datafile-facade.dir/link.d "CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o" -o test-datafile-facade -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 53%] Built target test-datafile-facade make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 53%] Building CXX object tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability-staggered && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability-staggered -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability-staggered/2fluid.cxx [ 55%] Linking CXX executable test_delp2 cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-delp2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-delp2.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-cyclic.dir/link.d "CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o" -o test_cyclic -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 55%] Built target test-cyclic make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 55%] Building CXX object tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fieldgroupComm && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fieldgroupComm -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -MF CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o.d -o CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fieldgroupComm/test_fieldgroupcomm.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-delp2.dir/link.d "CMakeFiles/test-delp2.dir/test_delp2.cxx.o" -o test_delp2 -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 55%] Built target test-delp2 make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 56%] Building CXX object tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata.dir/test_griddata.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata/test_griddata.cxx [ 57%] Linking CXX executable 2fluid cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability.dir/link.txt --verbose=1 [ 57%] Linking CXX executable test_fieldgroupcomm cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fieldgroupComm && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-fieldgroupComm.dir/link.txt --verbose=1 [ 57%] Linking CXX executable test_griddata cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-fieldgroupComm.dir/link.d "CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o" -o test_fieldgroupcomm -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 57%] Built target test-fieldgroupComm /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-griddata.dir/link.d "CMakeFiles/test-griddata.dir/test_griddata.cxx.o" -o test_griddata -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 57%] Built target test-griddata make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 57%] Building CXX object tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata-yboundary-guards && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards/test_griddata.cxx make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 59%] Building CXX object tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-gyro && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-gyro -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o -MF CMakeFiles/test-gyro.dir/test_gyro.cxx.o.d -o CMakeFiles/test-gyro.dir/test_gyro.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-gyro/test_gyro.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-drift-instability.dir/link.d "CMakeFiles/test-drift-instability.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 59%] Built target test-drift-instability make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-initial/CMakeFiles/test-initial.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 59%] Building CXX object tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-initial && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o -MF CMakeFiles/test-initial.dir/test_initial.cxx.o.d -o CMakeFiles/test-initial.dir/test_initial.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial/test_initial.cxx [ 59%] Linking CXX executable 2fluid cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability-staggered.dir/link.txt --verbose=1 [ 59%] Linking CXX executable test_griddata cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata-yboundary-guards && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata-yboundary-guards.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-griddata-yboundary-guards.dir/link.d "CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o" -o test_griddata -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 59%] Built target test-griddata-yboundary-guards [ 59%] Linking CXX executable test_gyro cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-gyro && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-gyro.dir/link.txt --verbose=1 [ 59%] Linking CXX executable test_initial cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-initial && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-initial.dir/link.txt --verbose=1 make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 60%] Building CXX object tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interchange-instability && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interchange-instability -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interchange-instability/2fluid.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-gyro.dir/link.d "CMakeFiles/test-gyro.dir/test_gyro.cxx.o" -o test_gyro -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 60%] Built target test-gyro make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 60%] Building CXX object tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate/test_interpolate.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-initial.dir/link.d "CMakeFiles/test-initial.dir/test_initial.cxx.o" -o test_initial -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 60%] Built target test-initial make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-drift-instability-staggered.dir/link.d "CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 61%] Building CXX object tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate-z && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z/test_interpolate.cxx [ 61%] Built target test-drift-instability-staggered make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 61%] Building CXX object tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invertable-operator && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invertable-operator -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -MF CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o.d -o CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invertable-operator/invertable_operator.cxx [ 61%] Linking CXX executable test_interpolate cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate.dir/link.txt --verbose=1 [ 61%] Linking CXX executable test_interpolate cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate-z && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate-z.dir/link.txt --verbose=1 [ 61%] Linking CXX executable 2fluid cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interchange-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interchange-instability.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-interpolate.dir/link.d "CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o" -o test_interpolate -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 61%] Built target test-interpolate /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-interpolate-z.dir/link.d "CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o" -o test_interpolate -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 61%] Linking CXX executable invertable_operator cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invertable-operator && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invertable-operator.dir/link.txt --verbose=1 [ 61%] Built target test-interpolate-z make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 63%] Building CXX object tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invpar && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invpar -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o -MF CMakeFiles/test-invpar.dir/test_invpar.cxx.o.d -o CMakeFiles/test-invpar.dir/test_invpar.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invpar/test_invpar.cxx make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 63%] Building CXX object tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o -MF CMakeFiles/test-laplace.dir/test_laplace.cxx.o.d -o CMakeFiles/test-laplace.dir/test_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace/test_laplace.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-interchange-instability.dir/link.d "CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 63%] Built target test-interchange-instability make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 64%] Building CXX object tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace-petsc3d && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -MF CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o.d -o CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d/test-laplace3d.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-invertable-operator.dir/link.d "CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o" -o invertable_operator -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 64%] Built target test-invertable-operator make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 64%] Building CXX object tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-fv && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-fv -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-fv/test-laplacexy.cxx [ 64%] Linking CXX executable test_laplace cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace.dir/link.txt --verbose=1 [ 64%] Linking CXX executable test_invpar cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invpar && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invpar.dir/link.txt --verbose=1 [ 64%] Linking CXX executable test-laplace3d cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace-petsc3d && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace-petsc3d.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-laplace.dir/link.d "CMakeFiles/test-laplace.dir/test_laplace.cxx.o" -o test_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 64%] Built target test-laplace make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 65%] Building CXX object tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-short && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-short -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-short/test-laplacexy.cxx [ 65%] Linking CXX executable test-laplacexy cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-fv && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-fv.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-invpar.dir/link.d "CMakeFiles/test-invpar.dir/test_invpar.cxx.o" -o test_invpar -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 65%] Built target test-invpar make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 65%] Building CXX object tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexz && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexz -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -MF CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o.d -o CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexz/test-laplacexz.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-laplacexy-fv.dir/link.d "CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o" -o test-laplacexy -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 65%] Built target test-laplacexy-fv make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 67%] Building CXX object tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-multigrid_laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-multigrid_laplace -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -MF CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o.d -o CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-multigrid_laplace/test_multigrid_laplace.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-laplace-petsc3d.dir/link.d "CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o" -o test-laplace3d -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 67%] Built target test-laplace-petsc3d make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 67%] Building CXX object tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-naulin-laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-naulin-laplace -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -MF CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o.d -o CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-naulin-laplace/test_naulin_laplace.cxx [ 67%] Linking CXX executable test-laplacexy cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-short && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-short.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-laplacexy-short.dir/link.d "CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o" -o test-laplacexy -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 67%] Built target test-laplacexy-short make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 68%] Building CXX object tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-options-netcdf && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -MF CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o.d -o CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf/test-options-netcdf.cxx [ 68%] Linking CXX executable test-laplacexz cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexz && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexz.dir/link.txt --verbose=1 [ 68%] Linking CXX executable test_naulin_laplace cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-naulin-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-naulin-laplace.dir/link.txt --verbose=1 [ 68%] Linking CXX executable test_multigrid_laplace cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-multigrid_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-multigrid-laplace.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-laplacexz.dir/link.d "CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o" -o test-laplacexz -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 68%] Built target test-laplacexz make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 68%] Building CXX object tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -MF CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o.d -o CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace/test_petsc_laplace.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-naulin-laplace.dir/link.d "CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o" -o test_naulin_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 68%] Built target test-naulin-laplace make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 69%] Building CXX object tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace_MAST-grid -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -MF CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o.d -o CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace_MAST-grid/test_petsc_laplace_MAST_grid.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-multigrid-laplace.dir/link.d "CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o" -o test_multigrid_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 69%] Built target test-multigrid-laplace make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 69%] Building CXX object tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restart-io && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -MF CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o.d -o CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io/test-restart-io.cxx [ 69%] Linking CXX executable test-options-netcdf cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-options-netcdf && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-options-netcdf.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-options-netcdf.dir/link.d "CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o" -o test-options-netcdf -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 69%] Built target test-options-netcdf make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 71%] Building CXX object tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restarting && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o -MF CMakeFiles/test-restarting.dir/test_restarting.cxx.o.d -o CMakeFiles/test-restarting.dir/test_restarting.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting/test_restarting.cxx [ 71%] Linking CXX executable test-restart-io cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restart-io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restart-io.dir/link.txt --verbose=1 [ 71%] Linking CXX executable test_petsc_laplace cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace.dir/link.txt --verbose=1 [ 71%] Linking CXX executable test_restarting cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restarting && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restarting.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-restart-io.dir/link.d "CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o" -o test-restart-io -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 71%] Built target test-restart-io make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 71%] Building CXX object tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-smooth && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o -MF CMakeFiles/test-smooth.dir/test_smooth.cxx.o.d -o CMakeFiles/test-smooth.dir/test_smooth.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth/test_smooth.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-restarting.dir/link.d "CMakeFiles/test-restarting.dir/test_restarting.cxx.o" -o test_restarting -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 71%] Built target test-restarting make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-snb/CMakeFiles/test-snb.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 72%] Building CXX object tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-snb && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-snb -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o -MF CMakeFiles/test-snb.dir/test_snb.cxx.o.d -o CMakeFiles/test-snb.dir/test_snb.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-snb/test_snb.cxx [ 72%] Linking CXX executable test_petsc_laplace_MAST_grid cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace-MAST-grid.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-petsc-laplace.dir/link.d "CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o" -o test_petsc_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 72%] Built target test-petsc-laplace make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-solver/CMakeFiles/test-solver.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 72%] Building CXX object tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-solver && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o -MF CMakeFiles/test-solver.dir/test_solver.cxx.o.d -o CMakeFiles/test-solver.dir/test_solver.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver/test_solver.cxx [ 72%] Linking CXX executable test_smooth cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-smooth && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-smooth.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-petsc-laplace-MAST-grid.dir/link.d "CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o" -o test_petsc_laplace_MAST_grid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 72%] Built target test-petsc-laplace-MAST-grid make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-squash/CMakeFiles/test-squash.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 73%] Building CXX object tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-squash && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o -MF CMakeFiles/test-squash.dir/squash.cxx.o.d -o CMakeFiles/test-squash.dir/squash.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash/squash.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-smooth.dir/link.d "CMakeFiles/test-smooth.dir/test_smooth.cxx.o" -o test_smooth -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 73%] Built target test-smooth make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 73%] Building CXX object tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck/test_stopCheck.cxx [ 73%] Linking CXX executable test_snb cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-snb && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-snb.dir/link.txt --verbose=1 [ 73%] Linking CXX executable squash cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-squash && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-squash.dir/link.txt --verbose=1 [ 73%] Linking CXX executable test_solver cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-solver && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-solver.dir/link.txt --verbose=1 [ 73%] Linking CXX executable test_stopCheck cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-squash.dir/link.d "CMakeFiles/test-squash.dir/squash.cxx.o" -o squash -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 73%] Built target test-squash make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 75%] Building CXX object tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck-file && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file/test_stopCheck.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-stopCheck.dir/link.d "CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o" -o test_stopCheck -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 75%] Built target test-stopCheck make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 75%] Building CXX object tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift/test-twistshift.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-snb.dir/link.d "CMakeFiles/test-snb.dir/test_snb.cxx.o" -o test_snb -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 75%] Built target test-snb make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 76%] Building CXX object tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift-staggered && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered/test-twistshift.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-solver.dir/link.d "CMakeFiles/test-solver.dir/test_solver.cxx.o" -o test_solver -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 76%] Built target test-solver make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-vec/CMakeFiles/test-vec.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 76%] Building CXX object tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-vec && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o -MF CMakeFiles/test-vec.dir/testVec.cxx.o.d -o CMakeFiles/test-vec.dir/testVec.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec/testVec.cxx [ 76%] Linking CXX executable test-twistshift cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift.dir/link.txt --verbose=1 [ 76%] Linking CXX executable test_stopCheck cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck-file && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck-file.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-twistshift.dir/link.d "CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o" -o test-twistshift -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 76%] Built target test-twistshift make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 77%] Building CXX object tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -MF CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o.d -o CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown/test_yupdown.cxx [ 77%] Linking CXX executable test-twistshift cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift-staggered.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-twistshift-staggered.dir/link.d "CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o" -o test-twistshift -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 77%] Built target test-twistshift-staggered make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 77%] Building CXX object tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o -MF CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o.d -o CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/get_par_bndry.cxx /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-stopCheck-file.dir/link.d "CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o" -o test_stopCheck -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 77%] Built target test-stopCheck-file make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 77%] Building CXX object tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googlemock && /usr/lib64/openmpi/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgmock_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Wundef -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o -MF CMakeFiles/gmock.dir/src/gmock-all.cc.o.d -o CMakeFiles/gmock.dir/src/gmock-all.cc.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/src/gmock-all.cc [ 77%] Linking CXX executable testVec cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-vec && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-vec.dir/link.txt --verbose=1 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/get_par_bndry.cxx: In function ‘int main(int, char**)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/get_par_bndry.cxx:14:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 14 | for (int i = 0; i < fields.size(); i++) { | ~~^~~~~~~~~~~~~~~ /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-vec.dir/link.d "CMakeFiles/test-vec.dir/testVec.cxx.o" -o testVec -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 77%] Built target test-vec make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 78%] Building python interface cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpython-314-x86_64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-314-x86_64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/../boutpp/__init__.py make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 78%] Built target boutpp [ 78%] Linking CXX executable test_yupdown cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown.dir/link.txt --verbose=1 [ 80%] Linking CXX executable get_par_bndry cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-fci-boundary.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-yupdown.dir/link.d "CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o" -o test_yupdown -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 80%] Built target test-yupdown make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/build-check-integrated-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check-integrated-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 80%] Built target build-check-integrated-tests [ 80%] Linking CXX shared library ../../../../../lib/libgmock.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmock.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-fci-boundary.dir/link.d "CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o" -o get_par_bndry -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 80%] Built target test-fci-boundary make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 80%] Built target build-check-mms-tests /usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,--dependency-file=CMakeFiles/gmock.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgmock.so.1.16.0 -o ../../../../../lib/libgmock.so.1.16.0 "CMakeFiles/gmock.dir/src/gmock-all.cc.o" -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../../../../lib/libgtest.so.1.16.0 cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgmock.so.1.16.0 ../../../../../lib/libgmock.so.1.16.0 ../../../../../lib/libgmock.so make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 80%] Built target gmock make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o [ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field.cxx.o [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_field2d.cxx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -MF CMakeFiles/serial_tests.dir/bout_test_main.cxx.o.d -o CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout_test_main.cxx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_field.cxx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem 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tests/unit/CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_field3d.cxx /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout_test_main.cxx: In function ‘int main(int, char**)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout_test_main.cxx:29:18: warning: unused variable ‘hyprelib’ [-Wunused-variable] 29 | bout::HypreLib hyprelib{}; | ^~~~~~~~ [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit 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tests/unit/CMakeFiles/serial_tests.dir/include/bout/test_petsc_matrix.cxx.o -MF CMakeFiles/serial_tests.dir/include/bout/test_petsc_matrix.cxx.o.d -o CMakeFiles/serial_tests.dir/include/bout/test_petsc_matrix.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_petsc_matrix.cxx [ 86%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/include/bout/test_petsc_setters.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include 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tests/unit/CMakeFiles/serial_tests.dir/include/bout/test_stencil.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem 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-I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o -MF CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o.d -o CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/test_cyclic_reduction.cxx In file included from /usr/include/c++/15/x86_64-redhat-linux/bits/c++allocator.h:33, from /usr/include/c++/15/bits/allocator.h:46, from /usr/include/c++/15/memory:67, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/gtest.h:55, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_template_combinations.cxx:1: In member function ‘std::__new_allocator, std::allocator > >::deallocate(std::__cxx11::basic_string, std::allocator >*, unsigned long)’, inlined from ‘std::allocator_traits, std::allocator > > >::deallocate(std::allocator, std::allocator > >&, std::__cxx11::basic_string, std::allocator >*, unsigned long)’ at /usr/include/c++/15/bits/alloc_traits.h:649:23, inlined from ‘std::_Vector_base, std::allocator >, std::allocator, std::allocator > > >::_M_deallocate(std::__cxx11::basic_string, std::allocator >*, unsigned long)’ at /usr/include/c++/15/bits/stl_vector.h:396:19, inlined from ‘std::_Vector_base, std::allocator >, std::allocator, std::allocator > > >::_M_deallocate(std::__cxx11::basic_string, std::allocator >*, unsigned long)’ at /usr/include/c++/15/bits/stl_vector.h:392:7, inlined from ‘std::_Vector_base, std::allocator >, std::allocator, std::allocator > > >::~_Vector_base()’ at /usr/include/c++/15/bits/stl_vector.h:375:15, inlined from ‘std::vector, std::allocator >, std::allocator, std::allocator > > >::~vector()’ at /usr/include/c++/15/bits/stl_vector.h:805:7, inlined from ‘TemplateCombinationsTest_TwoSetsMultiTypeItem_Test::TestBody()’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_template_combinations.cxx:148:1: /usr/include/c++/15/bits/new_allocator.h:172:66: warning: ‘operator delete(void*, unsigned long)’ called on pointer ‘__result’ with nonzero offset 32 [-Wfree-nonheap-object] 172 | _GLIBCXX_OPERATOR_DELETE(_GLIBCXX_SIZED_DEALLOC(__p, __n)); | ^ In file included from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/gtest-printers.h:126, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/gtest-matchers.h:49, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:47, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/gtest-death-test.h:43, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/gtest.h:64: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_template_combinations.cxx: In member function ‘TemplateCombinationsTest_TwoSetsMultiTypeItem_Test::TestBody()’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_template_combinations.cxx:124:6: note: declared here 124 | TEST(TemplateCombinationsTest, TwoSetsMultiTypeItem) { | ^~~~~~~~~~~~~~~~~~~~~~~~ [ 89%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/include/test_derivs.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem 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tests/unit/CMakeFiles/serial_tests.dir/include/test_mask.cxx.o -MF CMakeFiles/serial_tests.dir/include/test_mask.cxx.o.d -o CMakeFiles/serial_tests.dir/include/test_mask.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/test_mask.cxx [ 89%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/invert/test_fft.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode 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tests/unit/CMakeFiles/serial_tests.dir/mesh/test_mesh.cxx.o -MF CMakeFiles/serial_tests.dir/mesh/test_mesh.cxx.o.d -o CMakeFiles/serial_tests.dir/mesh/test_mesh.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/mesh/test_mesh.cxx [ 93%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/mesh/test_paralleltransform.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode 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tests/unit/CMakeFiles/serial_tests.dir/sys/test_msg_stack.cxx.o -MF CMakeFiles/serial_tests.dir/sys/test_msg_stack.cxx.o.d -o CMakeFiles/serial_tests.dir/sys/test_msg_stack.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/sys/test_msg_stack.cxx [ 96%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/sys/test_options.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode 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98%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem 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CMakeFiles/serial_tests.dir/mesh/data/test_gridfromoptions.cxx.o CMakeFiles/serial_tests.dir/mesh/parallel/test_shiftedmetric.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boundary_factory.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boutmesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates_accessor.cxx.o CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o CMakeFiles/serial_tests.dir/mesh/test_invert3x3.cxx.o CMakeFiles/serial_tests.dir/mesh/test_mesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_paralleltransform.cxx.o CMakeFiles/serial_tests.dir/solver/test_fakesolver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solverfactory.cxx.o CMakeFiles/serial_tests.dir/sys/test_boutexception.cxx.o CMakeFiles/serial_tests.dir/sys/test_expressionparser.cxx.o CMakeFiles/serial_tests.dir/sys/test_msg_stack.cxx.o CMakeFiles/serial_tests.dir/sys/test_options.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_netcdf.cxx.o CMakeFiles/serial_tests.dir/sys/test_optionsreader.cxx.o CMakeFiles/serial_tests.dir/sys/test_output.cxx.o CMakeFiles/serial_tests.dir/sys/test_range.cxx.o CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o CMakeFiles/serial_tests.dir/sys/test_utils.cxx.o CMakeFiles/serial_tests.dir/sys/test_variant.cxx.o CMakeFiles/serial_tests.dir/sys/test_raja.cxx.o CMakeFiles/serial_tests.dir/test_extras.cxx.o CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o -o serial_tests -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/lib ../../lib/libgmock.so.1.16.0 ../../lib/libbout++.so.5.2.0 ../../lib/libgtest.so.1.16.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../lib/libpvpre.so.1.0.0 ../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_cvode.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_ida.so.7.5.0 /usr/lib64/openmpi/lib/libsundials_arkode.so.6.5.0 /usr/lib64/openmpi/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target serial_tests make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/build-check-unit-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check-unit-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target build-check-unit-tests make -f CMakeFiles/build-check.dir/build.make CMakeFiles/build-check.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/build-check.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/build-check.dir/build.make CMakeFiles/build-check.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target build-check make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' + SEGFAULT_SIGNALS=segv + make check-unit-tests /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 check-unit-tests make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 48 make -f CMakeFiles/Makefile2 CMakeFiles/check-unit-tests.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 0%] Built target gtest make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 4%] Built target pvode make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 6%] Built target pvpre make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 68%] Built target bout++ make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 68%] Built target gmock make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/unit/CMakeFiles/serial_tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target serial_tests make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/build-check-unit-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check-unit-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target build-check-unit-tests make -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/check-unit-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' ctest -R serial_tests --output-on-failure Test project /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi Start 1: serial_tests 1/1 Test #1: serial_tests ..................... Passed 4.97 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 5.00 sec make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target check-unit-tests make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' + SEGFAULT_SIGNALS=segv + make check-mms-tests /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 check-mms-tests make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 36 make -f CMakeFiles/Makefile2 CMakeFiles/check-mms-tests.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 5%] Built target pvode make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 8%] Built target pvpre make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 91%] Built target bout++ make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 91%] Built target MMS-wave-1d-y make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 91%] Built target test-fci-boundary-grid make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 94%] Built target test-fci-boundary make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/MMS/advection/CMakeFiles/MMS-advection.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 94%] Built target MMS-advection make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 97%] Built target MMS-diffusion make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 97%] Built target MMS-spatial-fci make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target MMS-wave-1d make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target build-check-mms-tests make -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' ctest -R MMS- --output-on-failure Test project /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi Start 53: MMS-diffusion 1/8 Test #53: MMS-diffusion .................... Passed 16.48 sec Start 54: MMS-spatial-fci 2/8 Test #54: MMS-spatial-fci .................. Passed 10.19 sec Start 55: MMS-wave-1d 3/8 Test #55: MMS-wave-1d ...................... Passed 14.32 sec Start 56: MMS-wave-1d-y 4/8 Test #56: MMS-wave-1d-y .................... Passed 12.18 sec Start 57: MMS-bracket 5/8 Test #57: MMS-bracket ...................... Passed 1.45 sec Start 58: MMS-derivatives3 6/8 Test #58: MMS-derivatives3 ................. Passed 1.69 sec Start 59: MMS-shiftedmetricinterp 7/8 Test #59: MMS-shiftedmetricinterp .......... Passed 4.04 sec Start 60: MMS-upwinding3 8/8 Test #60: MMS-upwinding3 ................... Passed 1.89 sec 100% tests passed, 0 tests failed out of 8 Total Test time (real) = 62.25 sec make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' Built target check-mms-tests make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' + SEGFAULT_SIGNALS=segv + make check-integrated-tests /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 check-integrated-tests make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 58 make -f CMakeFiles/Makefile2 CMakeFiles/check-integrated-tests.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 3%] Built target pvode make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 5%] Built target pvpre make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 56%] Built target bout++ make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 56%] Built target test-yupdown-weights make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 60%] Built target boutpp.cpython-314-x86_64-linux-gnu make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 62%] Building python interface cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpython-314-x86_64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-314-x86_64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tools/pylib/_boutpp_build/../boutpp/__init__.py make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 62%] Built target boutpp make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 62%] Built target test-backtrace make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 63%] Built target test_beuler make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 65%] Built target test-bout-override-default-option make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 65%] Built target test-command-args make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-communications/CMakeFiles/test-communications.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-communications/CMakeFiles/test-communications.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 67%] Built target test-communications make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 67%] Built target test-coordinates-initialization make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 68%] Built target test-cyclic make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 70%] Built target test-delp2 make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 70%] Built target test-datafile-facade make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 72%] Built target test-drift-instability make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 72%] Built target test-drift-instability-staggered make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 72%] Built target test-fieldgroupComm make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 74%] Built target test-griddata make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 74%] Built target test-griddata-yboundary-guards make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 75%] Built target test-gyro make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-initial/CMakeFiles/test-initial.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-initial/CMakeFiles/test-initial.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 75%] Built target test-initial make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 77%] Built target test-interchange-instability make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 77%] Built target test-interpolate make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 79%] Built target test-interpolate-z make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 79%] Built target test-invertable-operator make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 81%] Built target test-invpar make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 81%] Built target test-laplace make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 82%] Built target test-laplace-petsc3d make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 82%] Built target test-laplacexy-fv make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 84%] Built target test-laplacexy-short make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 84%] Built target test-laplacexz make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 86%] Built target test-multigrid-laplace make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 86%] Built target test-naulin-laplace make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 87%] Built target test-options-netcdf make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 87%] Built target test-petsc-laplace make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 89%] Built target test-petsc-laplace-MAST-grid make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 89%] Built target test-restart-io make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 91%] Built target test-restarting make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 91%] Built target test-smooth make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-snb/CMakeFiles/test-snb.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-snb/CMakeFiles/test-snb.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 93%] Built target test-snb make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-solver/CMakeFiles/test-solver.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-solver/CMakeFiles/test-solver.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 93%] Built target test-solver make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-squash/CMakeFiles/test-squash.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-squash/CMakeFiles/test-squash.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 94%] Built target test-squash make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 94%] Built target test-stopCheck make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 96%] Built target test-stopCheck-file make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 96%] Built target test-twistshift make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 98%] Built target test-twistshift-staggered make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-vec/CMakeFiles/test-vec.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-vec/CMakeFiles/test-vec.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [ 98%] Built target test-vec make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target test-yupdown make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/build-check-integrated-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check-integrated-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' [100%] Built target build-check-integrated-tests make -f CMakeFiles/check-integrated-tests.dir/build.make CMakeFiles/check-integrated-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles/check-integrated-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' make -f CMakeFiles/check-integrated-tests.dir/build.make CMakeFiles/check-integrated-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' ctest -R test- --output-on-failure Test project /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi Start 2: test-backtrace 1/50 Test #2: test-backtrace ...................... Passed 0.87 sec Start 4: test-boutpp-collect 2/50 Test #4: test-boutpp-collect ................. Passed 1.52 sec Start 5: test-boutpp-collect-staggered 3/50 Test #5: test-boutpp-collect-staggered ....... Passed 1.52 sec Start 6: test-boutpp-legacy-model 4/50 Test #6: test-boutpp-legacy-model ............ Passed 1.58 sec Start 7: test-boutpp-mms-ddz 5/50 Test #7: test-boutpp-mms-ddz ................. Passed 1.44 sec Start 8: test-boutpp-print 6/50 Test #8: test-boutpp-print ................... Passed 1.44 sec Start 9: test-boutpp-simple-model 7/50 Test #9: test-boutpp-simple-model ............ Passed 1.60 sec Start 10: test-bout-override-default-option 8/50 Test #10: test-bout-override-default-option ... Passed 0.29 sec Start 11: test-command-args 9/50 Test #11: test-command-args ................... Passed 15.86 sec Start 12: test-communications 10/50 Test #12: test-communications ................. Passed 10.94 sec Start 13: test-coordinates-initialization 11/50 Test #13: test-coordinates-initialization ..... Passed 1.61 sec Start 14: test-cyclic 12/50 Test #14: test-cyclic ......................... Passed 18.55 sec Start 15: test-delp2 13/50 Test #15: test-delp2 .......................... Passed 20.72 sec Start 16: test-datafile-facade 14/50 Test #16: test-datafile-facade ................ Passed 4.03 sec Start 17: test-drift-instability 15/50 Test #17: test-drift-instability .............. Passed 5.17 sec Start 18: test-drift-instability-staggered 16/50 Test #18: test-drift-instability-staggered .... Passed 5.29 sec Start 19: test-fieldgroupComm 17/50 Test #19: test-fieldgroupComm ................. Passed 5.35 sec Start 20: test-fci-boundary 18/50 Test #20: test-fci-boundary ................... Passed 2.37 sec Start 21: test-griddata 19/50 Test #21: test-griddata ....................... Passed 1.97 sec Start 22: test-griddata-yboundary-guards 20/50 Test #22: test-griddata-yboundary-guards ...... Passed 10.51 sec Start 23: test-gyro 21/50 Test #23: test-gyro ........................... Passed 5.07 sec Start 24: test-initial 22/50 Test #24: test-initial ........................ Passed 9.68 sec Start 25: test-interchange-instability 23/50 Test #25: test-interchange-instability ........ Passed 8.66 sec Start 26: test-interpolate 24/50 Test #26: test-interpolate .................... Passed 18.68 sec Start 27: test-interpolate-z 25/50 Test #27: test-interpolate-z .................. Passed 6.56 sec Start 28: test-invertable-operator 26/50 Test #28: test-invertable-operator ............ Passed 3.50 sec Start 29: test-invpar 27/50 Test #29: test-invpar ......................... Passed 9.38 sec Start 30: test-laplace 28/50 Test #30: test-laplace ........................ Passed 16.72 sec Start 31: test-laplace-petsc3d 29/50 Test #31: test-laplace-petsc3d ................ Passed 9.93 sec Start 32: test-laplacexy-fv 30/50 Test #32: test-laplacexy-fv ................... Passed 453.32 sec Start 33: test-laplacexy-short 31/50 Test #33: test-laplacexy-short ................ Passed 1405.98 sec Start 34: test-laplacexz 32/50 Test #34: test-laplacexz ...................... Passed 5.09 sec Start 35: test-multigrid-laplace 33/50 Test #35: test-multigrid-laplace .............. Passed 4.61 sec Start 36: test-naulin-laplace 34/50 Test #36: test-naulin-laplace ................. Passed 3.68 sec Start 37: test-options-netcdf 35/50 Test #37: test-options-netcdf ................. Passed 1.97 sec Start 38: test-petsc-laplace 36/50 Test #38: test-petsc-laplace .................. Passed 6.17 sec Start 39: test-petsc-laplace-MAST-grid 37/50 Test #39: test-petsc-laplace-MAST-grid ........ Passed 27.09 sec Start 40: test-restart-io 38/50 Test #40: test-restart-io ..................... Passed 6.58 sec Start 41: test-restarting 39/50 Test #41: test-restarting ..................... Passed 8.25 sec Start 42: test-smooth 40/50 Test #42: test-smooth ......................... Passed 6.59 sec Start 43: test-snb 41/50 Test #43: test-snb ............................ Passed 1.39 sec Start 44: test-solver 42/50 Test #44: test-solver ......................... Passed 2.78 sec Start 45: test-squash 43/50 Test #45: test-squash ......................... Passed 15.08 sec Start 46: test-stopCheck 44/50 Test #46: test-stopCheck ...................... Passed 0.40 sec Start 47: test-stopCheck-file 45/50 Test #47: test-stopCheck-file ................. Passed 7.62 sec Start 48: test-twistshift 46/50 Test #48: test-twistshift ..................... Passed 2.00 sec Start 49: test-twistshift-staggered 47/50 Test #49: test-twistshift-staggered ........... Passed 2.00 sec Start 50: test-vec 48/50 Test #50: test-vec ............................ Passed 1.76 sec Start 51: test-yupdown 49/50 Test #51: test-yupdown ........................ Passed 3.49 sec Start 52: test-yupdown-weights 50/50 Test #52: test-yupdown-weights ................ Passed 1.99 sec 100% tests passed, 0 tests failed out of 50 Total Test time (real) = 2168.68 sec make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' Built target check-integrated-tests make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_openmpi' + popd ~/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 + '[' openmpi = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/openmpi/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/openmpi-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/openmpi-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-x86_64 + eval $'unset MPI_COMPILER;\nunset LD_LIBRARY_PATH;\nunset MPI_MAN;\nMANPATH=\'/usr/share/man:\'; export MANPATH;\nunset MPI_INCLUDE;\nunset _LMFILES_;\nunset LOADEDMODULES;\nunset CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\':/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nunset MPI_PYTHON3_SITEARCH;\nunset MPI_HOME;\nunset MPI_FORTRAN_MOD_DIR;\nunset __MODULES_LMALTNAME;\nunset __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':1\'; export __MODULES_SHARE_MANPATH;\nunset MPI_SUFFIX;\nunset MPI_SYSCONFIG;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nunset MPI_LIB;\nPATH=\'/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nunset MPI_BIN;\ntest 0;' ++ unset MPI_COMPILER ++ unset LD_LIBRARY_PATH ++ unset MPI_MAN ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ unset CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_HOME ++ unset MPI_FORTRAN_MOD_DIR ++ unset __MODULES_LMALTNAME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + for mpi in openmpi mpich + fail=1 + '[' mpich = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\nLOADEDMODULES=\'\'; export LOADEDMODULES;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\nLOADEDMODULES=\'\'; export LOADEDMODULES;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ LOADEDMODULES= ++++ export LOADEDMODULES ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/mpich-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/mpich-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-x86_64 + eval $'LD_LIBRARY_PATH=\'/usr/lib64/mpich/lib\'; export LD_LIBRARY_PATH;\nMPI_COMPILER=\'mpich-x86_64\'; export MPI_COMPILER;\nMANPATH=\'/usr/share/man/mpich-x86_64:/usr/share/man:\'; export MANPATH;\nMPI_INCLUDE=\'/usr/include/mpich-x86_64\'; export MPI_INCLUDE;\nMPI_MAN=\'/usr/share/man/mpich-x86_64\'; export MPI_MAN;\nMPI_PYTHON_SITEARCH=\'%{python2_sitearch}/mpich\'; export MPI_PYTHON_SITEARCH;\n_LMFILES_=\'/usr/share/modulefiles/mpi/mpich-x86_64\'; export _LMFILES_;\nLOADEDMODULES=\'mpi/mpich-x86_64\'; export LOADEDMODULES;\nCMAKE_PREFIX_PATH=\'/usr/lib64/mpich\'; export CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\'/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nMPI_PYTHON3_SITEARCH=\'/usr/lib64/python3.14/site-packages/mpich\'; export MPI_PYTHON3_SITEARCH;\nMPI_FORTRAN_MOD_DIR=\'/usr/lib64/gfortran/modules/mpich\'; export MPI_FORTRAN_MOD_DIR;\nMPI_HOME=\'/usr/lib64/mpich\'; export MPI_HOME;\n__MODULES_LMCONFLICT=\'mpi/mpich-x86_64&mpi\'; export __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':2\'; export __MODULES_SHARE_MANPATH;\nMPI_SYSCONFIG=\'/etc/mpich-x86_64\'; export MPI_SYSCONFIG;\nMPI_SUFFIX=\'_mpich\'; export MPI_SUFFIX;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nMPI_PYTHON2_SITEARCH=\'%{python2_sitearch}/mpich\'; export MPI_PYTHON2_SITEARCH;\nMPI_LIB=\'/usr/lib64/mpich/lib\'; export MPI_LIB;\nPATH=\'/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nMPI_BIN=\'/usr/lib64/mpich/bin\'; export MPI_BIN;\ntest 0;' ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ MPI_COMPILER=mpich-x86_64 ~/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich ~/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 ++ export MPI_COMPILER ++ MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_MAN=/usr/share/man/mpich-x86_64 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ CMAKE_PREFIX_PATH=/usr/lib64/mpich ++ export CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.14/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ __MODULES_LMCONFLICT='mpi/mpich-x86_64&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' + pushd build_mpich + export OMPI_MCA_rmaps_base_oversubscribe=yes + OMPI_MCA_rmaps_base_oversubscribe=yes + export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + export HDF5_USE_FILE_LOCKING=FALSE + HDF5_USE_FILE_LOCKING=FALSE + sed 's/ 3s / 30s /' tests/integrated/test-coordinates-initialization/runtest #!/bin/bash # Cores: 3 make || exit test -z $MPIRUN && MPIRUN='mpirun -np' # Kill the test after 3 seconds, if it hasn't already exited OMP_NUM_THREADS=1 $MPIRUN 3 timeout 30s ./test-coordinates-initialization e=$? if test $e -ne 0 then echo "The test failed. That can be caused by a timeout." echo "If this test is run on high load, it may fail occasionally." echo "The load is:" uptime fi exit $e + make -j4 build-check /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 build-check make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 76 make -f CMakeFiles/Makefile2 CMakeFiles/build-check.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/depend make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE 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/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 0%] Building CXX object tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googletest && /usr/lib64/mpich/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgtest_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Wundef -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o -MF CMakeFiles/gtest.dir/src/gtest-all.cc.o.d -o CMakeFiles/gtest.dir/src/gtest-all.cc.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/src/gtest-all.cc [ 0%] Creating test-fci-boundary grid file [ 2%] Built target pvode make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib:/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib: /usr/bin/python3.14 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/grid.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary/grid.fci.nc make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 3%] Built target pvpre make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 43%] Built target bout++ make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 43%] Building CXX object tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o [ 43%] Building CXX object tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d-y && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y/wave.cxx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/advection && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o -MF CMakeFiles/MMS-advection.dir/advection.cxx.o.d -o CMakeFiles/MMS-advection.dir/advection.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/advection/advection.cxx [ 43%] Linking CXX executable wave cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d-y && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d-y.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/MMS-wave-1d-y.dir/link.d "CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o" -o wave -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 43%] Built target MMS-wave-1d-y make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 43%] Building CXX object tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/diffusion && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -MF CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o.d -o CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion/diffusion.cxx [ 43%] Linking CXX executable advection cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/advection && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-advection.dir/link.txt --verbose=1 Making curvilinear poloidal grid creating grid... starting Bfield stuff done Bfield stuff starting Bfield stuff done Bfield stuff starting Bfield stuff done Bfield stuff WARNING: Outputting 2D metrics, discarding metric information. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 43%] Built target test-fci-boundary-grid make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 43%] Building CXX object tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/spatial/fci && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o -MF CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o.d -o CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci/fci_mms.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/MMS-advection.dir/link.d "CMakeFiles/MMS-advection.dir/advection.cxx.o" -o advection -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 43%] Built target MMS-advection make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 43%] Building CXX object tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d/wave.cxx [ 44%] Linking CXX executable cyto cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/diffusion && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-diffusion.dir/link.txt --verbose=1 [ 44%] Linking CXX executable fci_mms cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/spatial/fci && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-spatial-fci.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/MMS-diffusion.dir/link.d "CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o" -o cyto -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 44%] Built target MMS-diffusion make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 44%] Building CXX object tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown-weights && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -MF CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o.d -o CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights/test_yupdown_weights.cxx [ 46%] Linking CXX executable wave cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/MMS-spatial-fci.dir/link.d "CMakeFiles/MMS-spatial-fci.dir/fci_mms.cxx.o" -o fci_mms -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../../lib/libpvpre.so.1.0.0 ../../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 46%] Built target MMS-spatial-fci make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 48%] Built target boutpp.cpython-314-x86_64-linux-gnu make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 48%] Building CXX object tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-backtrace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -MF CMakeFiles/test-backtrace.dir/boutexcept.cxx.o.d -o CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace/boutexcept.cxx [ 48%] Linking CXX executable boutexcept cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-backtrace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-backtrace.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/MMS-wave-1d.dir/link.d "CMakeFiles/MMS-wave-1d.dir/wave.cxx.o" -o wave -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 48%] Built target MMS-wave-1d make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 50%] Building CXX object tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-beuler && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o -MF CMakeFiles/test_beuler.dir/test_beuler.cxx.o.d -o CMakeFiles/test_beuler.dir/test_beuler.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler/test_beuler.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-backtrace.dir/link.d "CMakeFiles/test-backtrace.dir/boutexcept.cxx.o" -o boutexcept -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 50%] Built target test-backtrace make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 50%] Building CXX object tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-bout-override-default-option && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -MF CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o.d -o CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option/test-bout-override-default-option.cxx [ 50%] Linking CXX executable test_yupdown_weights cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown-weights && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown-weights.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-yupdown-weights.dir/link.d "CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o" -o test_yupdown_weights -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 50%] Built target test-yupdown-weights make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 50%] Building CXX object tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-command-args && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o -MF CMakeFiles/test-command-args.dir/command-args.cxx.o.d -o CMakeFiles/test-command-args.dir/command-args.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args/command-args.cxx [ 50%] Linking CXX shared library ../../../../../lib/libgtest.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_link_script CMakeFiles/gtest.dir/link.txt --verbose=1 [ 50%] Linking CXX executable command-args cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-command-args && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-command-args.dir/link.txt --verbose=1 [ 51%] Linking CXX executable test-bout-override-default-option cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-bout-override-default-option && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-bout-override-default-option.dir/link.txt --verbose=1 [ 51%] Linking CXX executable test_beuler cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-beuler && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_beuler.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-command-args.dir/link.d "CMakeFiles/test-command-args.dir/command-args.cxx.o" -o command-args -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 51%] Built target test-command-args make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-communications/CMakeFiles/test-communications.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 51%] Building CXX object tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-communications && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o -MF CMakeFiles/test-communications.dir/test-communications.cxx.o.d -o CMakeFiles/test-communications.dir/test-communications.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications/test-communications.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-bout-override-default-option.dir/link.d "CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o" -o test-bout-override-default-option -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 51%] Built target test-bout-override-default-option /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test_beuler.dir/link.d CMakeFiles/test_beuler.dir/test_beuler.cxx.o -o test_beuler -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 51%] Built target test_beuler make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 51%] Building CXX object tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-coordinates-initialization && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -MF CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o.d -o CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization/test-coordinates-initialization.cxx make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 51%] Building CXX object tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-cyclic && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -MF CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o.d -o CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic/test_cyclic.cxx [ 52%] Linking CXX executable test-communications cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-communications && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-communications.dir/link.txt --verbose=1 [ 52%] Linking CXX executable test-coordinates-initialization cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-coordinates-initialization && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-coordinates-initialization.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-communications.dir/link.d "CMakeFiles/test-communications.dir/test-communications.cxx.o" -o test-communications -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 52%] Built target test-communications make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 52%] Building CXX object tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-delp2 && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o -MF CMakeFiles/test-delp2.dir/test_delp2.cxx.o.d -o CMakeFiles/test-delp2.dir/test_delp2.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2/test_delp2.cxx /usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,--dependency-file=CMakeFiles/gtest.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgtest.so.1.16.0 -o ../../../../../lib/libgtest.so.1.16.0 "CMakeFiles/gtest.dir/src/gtest-all.cc.o" cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgtest.so.1.16.0 ../../../../../lib/libgtest.so.1.16.0 ../../../../../lib/libgtest.so make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 52%] Built target gtest make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 52%] Building CXX object tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-datafilefacade && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -MF CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o.d -o CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade/test-datafile-facade.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-coordinates-initialization.dir/link.d "CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o" -o test-coordinates-initialization -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 52%] Built target test-coordinates-initialization make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 52%] Building CXX object tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability/2fluid.cxx [ 53%] Linking CXX executable test_cyclic cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-cyclic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-cyclic.dir/link.txt --verbose=1 [ 53%] Linking CXX executable test-datafile-facade cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-datafilefacade && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-datafile-facade.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-datafile-facade.dir/link.d "CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o" -o test-datafile-facade -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 53%] Built target test-datafile-facade make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 53%] Building CXX object tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability-staggered && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability-staggered -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability-staggered/2fluid.cxx [ 55%] Linking CXX executable test_delp2 cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-delp2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-delp2.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-cyclic.dir/link.d "CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o" -o test_cyclic -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 55%] Built target test-cyclic make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 55%] Building CXX object tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fieldgroupComm && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fieldgroupComm -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -MF CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o.d -o CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fieldgroupComm/test_fieldgroupcomm.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-delp2.dir/link.d "CMakeFiles/test-delp2.dir/test_delp2.cxx.o" -o test_delp2 -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 55%] Built target test-delp2 make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 56%] Building CXX object tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata.dir/test_griddata.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata/test_griddata.cxx [ 57%] Linking CXX executable 2fluid cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability.dir/link.txt --verbose=1 [ 57%] Linking CXX executable test_fieldgroupcomm cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fieldgroupComm && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-fieldgroupComm.dir/link.txt --verbose=1 [ 57%] Linking CXX executable test_griddata cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-fieldgroupComm.dir/link.d "CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o" -o test_fieldgroupcomm -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 57%] Built target test-fieldgroupComm /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-griddata.dir/link.d "CMakeFiles/test-griddata.dir/test_griddata.cxx.o" -o test_griddata -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 57%] Built target test-griddata make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 57%] Building CXX object tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata-yboundary-guards && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards/test_griddata.cxx make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 59%] Building CXX object tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-gyro && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-gyro -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o -MF CMakeFiles/test-gyro.dir/test_gyro.cxx.o.d -o CMakeFiles/test-gyro.dir/test_gyro.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-gyro/test_gyro.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-drift-instability.dir/link.d "CMakeFiles/test-drift-instability.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 59%] Built target test-drift-instability make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-initial/CMakeFiles/test-initial.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 59%] Building CXX object tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-initial && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o -MF CMakeFiles/test-initial.dir/test_initial.cxx.o.d -o CMakeFiles/test-initial.dir/test_initial.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial/test_initial.cxx [ 59%] Linking CXX executable 2fluid cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability-staggered.dir/link.txt --verbose=1 [ 59%] Linking CXX executable test_griddata cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata-yboundary-guards && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata-yboundary-guards.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-griddata-yboundary-guards.dir/link.d "CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o" -o test_griddata -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 59%] Built target test-griddata-yboundary-guards [ 59%] Linking CXX executable test_gyro cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-gyro && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-gyro.dir/link.txt --verbose=1 [ 59%] Linking CXX executable test_initial cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-initial && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-initial.dir/link.txt --verbose=1 make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 60%] Building CXX object tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interchange-instability && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interchange-instability -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interchange-instability/2fluid.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-gyro.dir/link.d "CMakeFiles/test-gyro.dir/test_gyro.cxx.o" -o test_gyro -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 60%] Built target test-gyro make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 60%] Building CXX object tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate/test_interpolate.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-initial.dir/link.d "CMakeFiles/test-initial.dir/test_initial.cxx.o" -o test_initial -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 60%] Built target test-initial make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 61%] Building CXX object tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate-z && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z/test_interpolate.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-drift-instability-staggered.dir/link.d "CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 61%] Built target test-drift-instability-staggered make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 61%] Building CXX object tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invertable-operator && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invertable-operator -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -MF CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o.d -o CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invertable-operator/invertable_operator.cxx [ 61%] Linking CXX executable test_interpolate cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate-z && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate-z.dir/link.txt --verbose=1 [ 61%] Linking CXX executable test_interpolate cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate.dir/link.txt --verbose=1 [ 61%] Linking CXX executable 2fluid cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interchange-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interchange-instability.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-interpolate-z.dir/link.d "CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o" -o test_interpolate -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 61%] Built target test-interpolate-z /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-interpolate.dir/link.d "CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o" -o test_interpolate -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 61%] Built target test-interpolate make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 63%] Building CXX object tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invpar && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invpar -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o -MF CMakeFiles/test-invpar.dir/test_invpar.cxx.o.d -o CMakeFiles/test-invpar.dir/test_invpar.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invpar/test_invpar.cxx [ 63%] Linking CXX executable invertable_operator cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invertable-operator && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invertable-operator.dir/link.txt --verbose=1 make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 63%] Building CXX object tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o -MF CMakeFiles/test-laplace.dir/test_laplace.cxx.o.d -o CMakeFiles/test-laplace.dir/test_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace/test_laplace.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-interchange-instability.dir/link.d "CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 63%] Built target test-interchange-instability make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 64%] Building CXX object tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace-petsc3d && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -MF CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o.d -o CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d/test-laplace3d.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-invertable-operator.dir/link.d "CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o" -o invertable_operator -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 64%] Built target test-invertable-operator make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 64%] Building CXX object tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-fv && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-fv -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-fv/test-laplacexy.cxx [ 64%] Linking CXX executable test_laplace cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace.dir/link.txt --verbose=1 [ 64%] Linking CXX executable test_invpar cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invpar && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invpar.dir/link.txt --verbose=1 [ 64%] Linking CXX executable test-laplace3d cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace-petsc3d && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace-petsc3d.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-laplace.dir/link.d "CMakeFiles/test-laplace.dir/test_laplace.cxx.o" -o test_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 64%] Built target test-laplace make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 65%] Building CXX object tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-short && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-short -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-short/test-laplacexy.cxx [ 65%] Linking CXX executable test-laplacexy cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-fv && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-fv.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-invpar.dir/link.d "CMakeFiles/test-invpar.dir/test_invpar.cxx.o" -o test_invpar -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 65%] Built target test-invpar make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 65%] Building CXX object tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexz && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexz -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -MF CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o.d -o CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexz/test-laplacexz.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-laplacexy-fv.dir/link.d "CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o" -o test-laplacexy -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 65%] Built target test-laplacexy-fv make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 67%] Building CXX object tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-multigrid_laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-multigrid_laplace -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -MF CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o.d -o CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-multigrid_laplace/test_multigrid_laplace.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-laplace-petsc3d.dir/link.d "CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o" -o test-laplace3d -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 67%] Built target test-laplace-petsc3d make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 67%] Building CXX object tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-naulin-laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-naulin-laplace -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -MF CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o.d -o CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-naulin-laplace/test_naulin_laplace.cxx [ 67%] Linking CXX executable test-laplacexy cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-short && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-short.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-laplacexy-short.dir/link.d "CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o" -o test-laplacexy -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 67%] Linking CXX executable test-laplacexz cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexz && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexz.dir/link.txt --verbose=1 [ 67%] Built target test-laplacexy-short make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 68%] Building CXX object tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-options-netcdf && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -MF CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o.d -o CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf/test-options-netcdf.cxx [ 68%] Linking CXX executable test_naulin_laplace cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-naulin-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-naulin-laplace.dir/link.txt --verbose=1 [ 68%] Linking CXX executable test_multigrid_laplace cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-multigrid_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-multigrid-laplace.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-laplacexz.dir/link.d "CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o" -o test-laplacexz -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 68%] Built target test-laplacexz make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 68%] Building CXX object tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -MF CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o.d -o CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace/test_petsc_laplace.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-naulin-laplace.dir/link.d "CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o" -o test_naulin_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 68%] Built target test-naulin-laplace make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 69%] Building CXX object tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace_MAST-grid -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -MF CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o.d -o CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace_MAST-grid/test_petsc_laplace_MAST_grid.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-multigrid-laplace.dir/link.d "CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o" -o test_multigrid_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 69%] Built target test-multigrid-laplace make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 69%] Building CXX object tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restart-io && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -MF CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o.d -o CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io/test-restart-io.cxx [ 69%] Linking CXX executable test-options-netcdf cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-options-netcdf && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-options-netcdf.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-options-netcdf.dir/link.d "CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o" -o test-options-netcdf -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 69%] Built target test-options-netcdf make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 71%] Building CXX object tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restarting && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o -MF CMakeFiles/test-restarting.dir/test_restarting.cxx.o.d -o CMakeFiles/test-restarting.dir/test_restarting.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting/test_restarting.cxx [ 71%] Linking CXX executable test-restart-io cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restart-io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restart-io.dir/link.txt --verbose=1 [ 71%] Linking CXX executable test_petsc_laplace cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-restart-io.dir/link.d "CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o" -o test-restart-io -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 71%] Built target test-restart-io make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 71%] Building CXX object tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-smooth && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o -MF CMakeFiles/test-smooth.dir/test_smooth.cxx.o.d -o CMakeFiles/test-smooth.dir/test_smooth.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth/test_smooth.cxx [ 71%] Linking CXX executable test_restarting cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restarting && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restarting.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-restarting.dir/link.d "CMakeFiles/test-restarting.dir/test_restarting.cxx.o" -o test_restarting -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 71%] Built target test-restarting make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-snb/CMakeFiles/test-snb.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 72%] Building CXX object tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-snb && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-snb -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o -MF CMakeFiles/test-snb.dir/test_snb.cxx.o.d -o CMakeFiles/test-snb.dir/test_snb.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-snb/test_snb.cxx [ 72%] Linking CXX executable test_petsc_laplace_MAST_grid cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace-MAST-grid.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-petsc-laplace.dir/link.d "CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o" -o test_petsc_laplace -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 72%] Built target test-petsc-laplace make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-solver/CMakeFiles/test-solver.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 72%] Building CXX object tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-solver && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o -MF CMakeFiles/test-solver.dir/test_solver.cxx.o.d -o CMakeFiles/test-solver.dir/test_solver.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver/test_solver.cxx [ 72%] Linking CXX executable test_smooth cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-smooth && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-smooth.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-petsc-laplace-MAST-grid.dir/link.d "CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o" -o test_petsc_laplace_MAST_grid -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 72%] Built target test-petsc-laplace-MAST-grid make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-squash/CMakeFiles/test-squash.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 73%] Building CXX object tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-squash && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o -MF CMakeFiles/test-squash.dir/squash.cxx.o.d -o CMakeFiles/test-squash.dir/squash.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash/squash.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-smooth.dir/link.d "CMakeFiles/test-smooth.dir/test_smooth.cxx.o" -o test_smooth -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 73%] Built target test-smooth make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 73%] Building CXX object tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck/test_stopCheck.cxx [ 73%] Linking CXX executable test_snb cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-snb && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-snb.dir/link.txt --verbose=1 [ 73%] Linking CXX executable test_solver cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-solver && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-solver.dir/link.txt --verbose=1 [ 73%] Linking CXX executable squash cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-squash && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-squash.dir/link.txt --verbose=1 [ 73%] Linking CXX executable test_stopCheck cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-squash.dir/link.d "CMakeFiles/test-squash.dir/squash.cxx.o" -o squash -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 73%] Built target test-squash make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 75%] Building CXX object tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck-file && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file/test_stopCheck.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-stopCheck.dir/link.d "CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o" -o test_stopCheck -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 75%] Built target test-stopCheck make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 75%] Building CXX object tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift/test-twistshift.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-solver.dir/link.d "CMakeFiles/test-solver.dir/test_solver.cxx.o" -o test_solver -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 75%] Built target test-solver make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 76%] Building CXX object tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift-staggered && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered/test-twistshift.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-snb.dir/link.d "CMakeFiles/test-snb.dir/test_snb.cxx.o" -o test_snb -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 76%] Built target test-snb make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-vec/CMakeFiles/test-vec.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 76%] Building CXX object tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-vec && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o -MF CMakeFiles/test-vec.dir/testVec.cxx.o.d -o CMakeFiles/test-vec.dir/testVec.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec/testVec.cxx [ 76%] Linking CXX executable test-twistshift cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift.dir/link.txt --verbose=1 [ 76%] Linking CXX executable test_stopCheck cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck-file && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck-file.dir/link.txt --verbose=1 [ 76%] Linking CXX executable test-twistshift cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift-staggered.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-twistshift.dir/link.d "CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o" -o test-twistshift -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 76%] Built target test-twistshift make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 77%] Building CXX object tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -MF CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o.d -o CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown/test_yupdown.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-twistshift-staggered.dir/link.d "CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o" -o test-twistshift -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 77%] Built target test-twistshift-staggered make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 77%] Building CXX object tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o -MF CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o.d -o CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/get_par_bndry.cxx /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-stopCheck-file.dir/link.d "CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o" -o test_stopCheck -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 77%] Built target test-stopCheck-file make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 77%] Building CXX object tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googlemock && /usr/lib64/mpich/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgmock_EXPORTS -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Wundef -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o -MF CMakeFiles/gmock.dir/src/gmock-all.cc.o.d -o CMakeFiles/gmock.dir/src/gmock-all.cc.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/src/gmock-all.cc [ 77%] Linking CXX executable testVec cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-vec && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-vec.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-vec.dir/link.d "CMakeFiles/test-vec.dir/testVec.cxx.o" -o testVec -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 77%] Built target test-vec make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 78%] Building python interface cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpython-314-x86_64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-314-x86_64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/../boutpp/__init__.py make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 78%] Built target boutpp /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/get_par_bndry.cxx: In function ‘int main(int, char**)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary/get_par_bndry.cxx:14:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 14 | for (int i = 0; i < fields.size(); i++) { | ~~^~~~~~~~~~~~~~~ [ 78%] Linking CXX executable test_yupdown cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown.dir/link.txt --verbose=1 [ 80%] Linking CXX executable get_par_bndry cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-fci-boundary.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-yupdown.dir/link.d "CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o" -o test_yupdown -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 80%] Built target test-yupdown make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/build-check-integrated-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check-integrated-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 80%] Built target build-check-integrated-tests [ 80%] Linking CXX shared library ../../../../../lib/libgmock.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmock.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/test-fci-boundary.dir/link.d "CMakeFiles/test-fci-boundary.dir/get_par_bndry.cxx.o" -o get_par_bndry -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../lib/libbout++.so.5.2.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../../lib/libpvpre.so.1.0.0 ../../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 80%] Built target test-fci-boundary make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 80%] Built target build-check-mms-tests /usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,--dependency-file=CMakeFiles/gmock.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgmock.so.1.16.0 -o ../../../../../lib/libgmock.so.1.16.0 "CMakeFiles/gmock.dir/src/gmock-all.cc.o" -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../../../../lib/libgtest.so.1.16.0 cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgmock.so.1.16.0 ../../../../../lib/libgmock.so.1.16.0 ../../../../../lib/libgmock.so make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 80%] Built target gmock make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o [ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field.cxx.o [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -MF CMakeFiles/serial_tests.dir/bout_test_main.cxx.o.d -o CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout_test_main.cxx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_field.cxx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_field2d.cxx cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_field3d.cxx /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout_test_main.cxx: In function ‘int main(int, char**)’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout_test_main.cxx:29:18: warning: unused variable ‘hyprelib’ [-Wunused-variable] 29 | bout::HypreLib hyprelib{}; | ^~~~~~~~ [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_field_factory.cxx [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_fieldgroup.cxx [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_fieldperp.cxx [ 82%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_initialprofiles.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_initialprofiles.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_initialprofiles.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_initialprofiles.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_initialprofiles.cxx [ 82%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_vector2d.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_vector2d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_vector2d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_vector2d.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/field/test_vector2d.cxx [ 82%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_vector3d.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 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tests/unit/CMakeFiles/serial_tests.dir/include/bout/test_assert.cxx.o -MF CMakeFiles/serial_tests.dir/include/bout/test_assert.cxx.o.d -o CMakeFiles/serial_tests.dir/include/bout/test_assert.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_assert.cxx [ 84%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/include/bout/test_bout_enum_class.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include 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tests/unit/CMakeFiles/serial_tests.dir/include/bout/test_petsc_indexer.cxx.o -MF CMakeFiles/serial_tests.dir/include/bout/test_petsc_indexer.cxx.o.d -o CMakeFiles/serial_tests.dir/include/bout/test_petsc_indexer.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_petsc_indexer.cxx [ 86%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/include/bout/test_petsc_matrix.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include 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tests/unit/CMakeFiles/serial_tests.dir/include/bout/test_single_index_ops.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem 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tests/unit/CMakeFiles/serial_tests.dir/include/bout/test_stencil.cxx.o -MF CMakeFiles/serial_tests.dir/include/bout/test_stencil.cxx.o.d -o CMakeFiles/serial_tests.dir/include/bout/test_stencil.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_stencil.cxx [ 88%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/include/bout/test_template_combinations.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic 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-Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/include/bout/test_traits.cxx.o -MF CMakeFiles/serial_tests.dir/include/bout/test_traits.cxx.o.d -o CMakeFiles/serial_tests.dir/include/bout/test_traits.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_traits.cxx [ 89%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o -MF CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o.d -o CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/test_cyclic_reduction.cxx In file included from /usr/include/c++/15/x86_64-redhat-linux/bits/c++allocator.h:33, from /usr/include/c++/15/bits/allocator.h:46, from /usr/include/c++/15/memory:67, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/gtest.h:55, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_template_combinations.cxx:1: In member function ‘std::__new_allocator, std::allocator > >::deallocate(std::__cxx11::basic_string, std::allocator >*, unsigned long)’, inlined from ‘std::allocator_traits, std::allocator > > >::deallocate(std::allocator, std::allocator > >&, std::__cxx11::basic_string, std::allocator >*, unsigned long)’ at /usr/include/c++/15/bits/alloc_traits.h:649:23, inlined from ‘std::_Vector_base, std::allocator >, std::allocator, std::allocator > > >::_M_deallocate(std::__cxx11::basic_string, std::allocator >*, unsigned long)’ at /usr/include/c++/15/bits/stl_vector.h:396:19, inlined from ‘std::_Vector_base, std::allocator >, std::allocator, std::allocator > > >::_M_deallocate(std::__cxx11::basic_string, std::allocator >*, unsigned long)’ at /usr/include/c++/15/bits/stl_vector.h:392:7, inlined from ‘std::_Vector_base, std::allocator >, std::allocator, std::allocator > > >::~_Vector_base()’ at /usr/include/c++/15/bits/stl_vector.h:375:15, inlined from ‘std::vector, std::allocator >, std::allocator, std::allocator > > >::~vector()’ at /usr/include/c++/15/bits/stl_vector.h:805:7, inlined from ‘TemplateCombinationsTest_TwoSetsMultiTypeItem_Test::TestBody()’ at /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_template_combinations.cxx:148:1: /usr/include/c++/15/bits/new_allocator.h:172:66: warning: ‘operator delete(void*, unsigned long)’ called on pointer ‘__result’ with nonzero offset 32 [-Wfree-nonheap-object] 172 | _GLIBCXX_OPERATOR_DELETE(_GLIBCXX_SIZED_DEALLOC(__p, __n)); | ^ In file included from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/gtest-printers.h:126, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/gtest-matchers.h:49, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:47, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/gtest-death-test.h:43, from /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include/gtest/gtest.h:64: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_template_combinations.cxx: In member function ‘TemplateCombinationsTest_TwoSetsMultiTypeItem_Test::TestBody()’: /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/bout/test_template_combinations.cxx:124:6: note: declared here 124 | TEST(TemplateCombinationsTest, TwoSetsMultiTypeItem) { | ^~~~~~~~~~~~~~~~~~~~~~~~ [ 89%] Building CXX object 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tests/unit/CMakeFiles/serial_tests.dir/include/test_mask.cxx.o -MF CMakeFiles/serial_tests.dir/include/test_mask.cxx.o.d -o CMakeFiles/serial_tests.dir/include/test_mask.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/include/test_mask.cxx [ 89%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/invert/test_fft.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode 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tests/unit/CMakeFiles/serial_tests.dir/mesh/test_boundary_factory.cxx.o -MF CMakeFiles/serial_tests.dir/mesh/test_boundary_factory.cxx.o.d -o CMakeFiles/serial_tests.dir/mesh/test_boundary_factory.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/mesh/test_boundary_factory.cxx [ 92%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/mesh/test_boutmesh.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include 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tests/unit/CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o -MF CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o.d -o CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/sys/test_options_fields.cxx [ 97%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/sys/test_options_netcdf.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include 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tests/unit/CMakeFiles/serial_tests.dir/sys/test_raja.cxx.o -MF CMakeFiles/serial_tests.dir/sys/test_raja.cxx.o.d -o CMakeFiles/serial_tests.dir/sys/test_raja.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/sys/test_raja.cxx /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/sys/test_raja.cxx:96:7: warning: multi-line comment [-Wcomment] 96 | #if 0 // disable temporarily until reconcile iteration space for parallel_forall under \ | ^ [100%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/test_extras.cxx.o cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/bout++ -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include 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-I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/../../include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/include -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o -MF CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o.d -o CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o -c /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit/src/test_bout++.cxx [100%] Linking CXX executable serial_tests cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit && /usr/bin/cmake -E cmake_link_script CMakeFiles/serial_tests.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/serial_tests.dir/link.d CMakeFiles/serial_tests.dir/bout_test_main.cxx.o CMakeFiles/serial_tests.dir/field/test_field.cxx.o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o CMakeFiles/serial_tests.dir/field/test_initialprofiles.cxx.o CMakeFiles/serial_tests.dir/field/test_vector2d.cxx.o CMakeFiles/serial_tests.dir/field/test_vector3d.cxx.o CMakeFiles/serial_tests.dir/field/test_where.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_array.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_assert.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_bout_enum_class.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_deriv_store.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_generic_factory.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_macro_for_each.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_monitor.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_indexer.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_matrix.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_setters.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_vector.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_region.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_single_index_ops.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_stencil.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_template_combinations.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_traits.cxx.o CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o CMakeFiles/serial_tests.dir/include/test_derivs.cxx.o CMakeFiles/serial_tests.dir/include/test_mask.cxx.o CMakeFiles/serial_tests.dir/invert/test_fft.cxx.o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_petsc3damg.cxx.o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_cyclic.cxx.o CMakeFiles/serial_tests.dir/mesh/data/test_gridfromoptions.cxx.o CMakeFiles/serial_tests.dir/mesh/parallel/test_shiftedmetric.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boundary_factory.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boutmesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates_accessor.cxx.o CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o CMakeFiles/serial_tests.dir/mesh/test_invert3x3.cxx.o CMakeFiles/serial_tests.dir/mesh/test_mesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_paralleltransform.cxx.o CMakeFiles/serial_tests.dir/solver/test_fakesolver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solverfactory.cxx.o CMakeFiles/serial_tests.dir/sys/test_boutexception.cxx.o CMakeFiles/serial_tests.dir/sys/test_expressionparser.cxx.o CMakeFiles/serial_tests.dir/sys/test_msg_stack.cxx.o CMakeFiles/serial_tests.dir/sys/test_options.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_netcdf.cxx.o CMakeFiles/serial_tests.dir/sys/test_optionsreader.cxx.o CMakeFiles/serial_tests.dir/sys/test_output.cxx.o CMakeFiles/serial_tests.dir/sys/test_range.cxx.o CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o CMakeFiles/serial_tests.dir/sys/test_utils.cxx.o CMakeFiles/serial_tests.dir/sys/test_variant.cxx.o CMakeFiles/serial_tests.dir/sys/test_raja.cxx.o CMakeFiles/serial_tests.dir/test_extras.cxx.o CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o -o serial_tests -Wl,-rpath,/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/lib ../../lib/libgmock.so.1.16.0 ../../lib/libbout++.so.5.2.0 ../../lib/libgtest.so.1.16.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.11.2.0 ../../lib/libpvpre.so.1.0.0 ../../lib/libpvode.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.7.5.0 /usr/lib64/mpich/lib/libsundials_cvode.so.7.5.0 /usr/lib64/mpich/lib/libsundials_ida.so.7.5.0 /usr/lib64/mpich/lib/libsundials_arkode.so.6.5.0 /usr/lib64/mpich/lib/libsundials_core.so.7.5.0 -ldl make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target serial_tests make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/build-check-unit-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check-unit-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target build-check-unit-tests make -f CMakeFiles/build-check.dir/build.make CMakeFiles/build-check.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/build-check.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/build-check.dir/build.make CMakeFiles/build-check.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target build-check make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' + SEGFAULT_SIGNALS=segv + make check-unit-tests /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 check-unit-tests make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 48 make -f CMakeFiles/Makefile2 CMakeFiles/check-unit-tests.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googletest /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 0%] Built target gtest make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 4%] Built target pvode make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 6%] Built target pvpre make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 68%] Built target bout++ make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 68%] Built target gmock make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/unit/CMakeFiles/serial_tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target serial_tests make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/build-check-unit-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check-unit-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target build-check-unit-tests make -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/check-unit-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' ctest -R serial_tests --output-on-failure Test project /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich Start 1: serial_tests 1/1 Test #1: serial_tests ..................... Passed 3.38 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 3.41 sec make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target check-unit-tests make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' + SEGFAULT_SIGNALS=segv + make check-mms-tests /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 check-mms-tests make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 36 make -f CMakeFiles/Makefile2 CMakeFiles/check-mms-tests.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 5%] Built target pvode make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 8%] Built target pvpre make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 91%] Built target bout++ make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d-y /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 91%] Built target MMS-wave-1d-y make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary-grid.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 91%] Built target test-fci-boundary-grid make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build.make tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-fci-boundary/CMakeFiles/test-fci-boundary.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 94%] Built target test-fci-boundary make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/advection /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/MMS/advection/CMakeFiles/MMS-advection.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 94%] Built target MMS-advection make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/diffusion /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 97%] Built target MMS-diffusion make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/spatial/fci /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build.make tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/MMS/spatial/fci/CMakeFiles/MMS-spatial-fci.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 97%] Built target MMS-spatial-fci make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target MMS-wave-1d make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target build-check-mms-tests make -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' ctest -R MMS- --output-on-failure Test project /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich Start 53: MMS-diffusion 1/8 Test #53: MMS-diffusion .................... Passed 9.25 sec Start 54: MMS-spatial-fci 2/8 Test #54: MMS-spatial-fci .................. Passed 4.55 sec Start 55: MMS-wave-1d 3/8 Test #55: MMS-wave-1d ...................... Passed 7.74 sec Start 56: MMS-wave-1d-y 4/8 Test #56: MMS-wave-1d-y .................... Passed 5.61 sec Start 57: MMS-bracket 5/8 Test #57: MMS-bracket ...................... Passed 0.39 sec Start 58: MMS-derivatives3 6/8 Test #58: MMS-derivatives3 ................. Passed 0.63 sec Start 59: MMS-shiftedmetricinterp 7/8 Test #59: MMS-shiftedmetricinterp .......... Passed 3.05 sec Start 60: MMS-upwinding3 8/8 Test #60: MMS-upwinding3 ................... Passed 0.83 sec 100% tests passed, 0 tests failed out of 8 Total Test time (real) = 32.06 sec make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' Built target check-mms-tests make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' + SEGFAULT_SIGNALS=segv + make check-integrated-tests /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 check-integrated-tests make[1]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/cmake -S/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 -B/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 58 make -f CMakeFiles/Makefile2 CMakeFiles/check-integrated-tests.dir/all make[2]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 3%] Built target pvode make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 5%] Built target pvpre make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 56%] Built target bout++ make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown-weights /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 56%] Built target test-yupdown-weights make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-314-x86_64-linux-gnu.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 60%] Built target boutpp.cpython-314-x86_64-linux-gnu make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 62%] Building python interface cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpython-314-x86_64-linux-gnu.so /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-314-x86_64-linux-gnu.so cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tools/pylib/_boutpp_build/../boutpp/__init__.py make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 62%] Built target boutpp make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-backtrace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 62%] Built target test-backtrace make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-beuler /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 63%] Built target test_beuler make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 65%] Built target test-bout-override-default-option make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-command-args /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 65%] Built target test-command-args make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-communications /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-communications/CMakeFiles/test-communications.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-communications/CMakeFiles/test-communications.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 67%] Built target test-communications make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 67%] Built target test-coordinates-initialization make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-cyclic /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 68%] Built target test-cyclic make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-delp2 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 70%] Built target test-delp2 make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-datafilefacade /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 70%] Built target test-datafile-facade make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 72%] Built target test-drift-instability make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 72%] Built target test-drift-instability-staggered make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 72%] Built target test-fieldgroupComm make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 74%] Built target test-griddata make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 74%] Built target test-griddata-yboundary-guards make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-gyro /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 75%] Built target test-gyro make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-initial /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-initial/CMakeFiles/test-initial.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-initial/CMakeFiles/test-initial.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 75%] Built target test-initial make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interchange-instability /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 77%] Built target test-interchange-instability make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 77%] Built target test-interpolate make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate-z /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 79%] Built target test-interpolate-z make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invertable-operator /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 79%] Built target test-invertable-operator make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invpar /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 81%] Built target test-invpar make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 81%] Built target test-laplace make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 82%] Built target test-laplace-petsc3d make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 82%] Built target test-laplacexy-fv make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-short /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 84%] Built target test-laplacexy-short make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexz /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 84%] Built target test-laplacexz make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 86%] Built target test-multigrid-laplace make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-naulin-laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 86%] Built target test-naulin-laplace make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-options-netcdf /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 87%] Built target test-options-netcdf make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 87%] Built target test-petsc-laplace make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 89%] Built target test-petsc-laplace-MAST-grid make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restart-io /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 89%] Built target test-restart-io make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restarting /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 91%] Built target test-restarting make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-smooth /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 91%] Built target test-smooth make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-snb /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-snb/CMakeFiles/test-snb.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-snb/CMakeFiles/test-snb.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 93%] Built target test-snb make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-solver /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-solver/CMakeFiles/test-solver.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-solver/CMakeFiles/test-solver.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 93%] Built target test-solver make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-squash /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-squash/CMakeFiles/test-squash.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-squash/CMakeFiles/test-squash.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 94%] Built target test-squash make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 94%] Built target test-stopCheck make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck-file /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 96%] Built target test-stopCheck-file make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 96%] Built target test-twistshift make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 98%] Built target test-twistshift-staggered make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-vec /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-vec/CMakeFiles/test-vec.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-vec/CMakeFiles/test-vec.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [ 98%] Built target test-vec make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target test-yupdown make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/build-check-integrated-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check-integrated-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' [100%] Built target build-check-integrated-tests make -f CMakeFiles/check-integrated-tests.dir/build.make CMakeFiles/check-integrated-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' cd /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles/check-integrated-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' make -f CMakeFiles/check-integrated-tests.dir/build.make CMakeFiles/check-integrated-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' ctest -R test- --output-on-failure Test project /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich Start 2: test-backtrace 1/50 Test #2: test-backtrace ...................... Passed 0.79 sec Start 4: test-boutpp-collect 2/50 Test #4: test-boutpp-collect ................. Passed 0.47 sec Start 5: test-boutpp-collect-staggered 3/50 Test #5: test-boutpp-collect-staggered ....... Passed 0.46 sec Start 6: test-boutpp-legacy-model 4/50 Test #6: test-boutpp-legacy-model ............ Passed 0.52 sec Start 7: test-boutpp-mms-ddz 5/50 Test #7: test-boutpp-mms-ddz ................. Passed 0.38 sec Start 8: test-boutpp-print 6/50 Test #8: test-boutpp-print ................... Passed 0.39 sec Start 9: test-boutpp-simple-model 7/50 Test #9: test-boutpp-simple-model ............ Passed 0.54 sec Start 10: test-bout-override-default-option 8/50 Test #10: test-bout-override-default-option ... Passed 0.24 sec Start 11: test-command-args 9/50 Test #11: test-command-args ................... Passed 4.66 sec Start 12: test-communications 10/50 Test #12: test-communications ................. Passed 8.64 sec Start 13: test-coordinates-initialization 11/50 Test #13: test-coordinates-initialization ..... Passed 0.51 sec Start 14: test-cyclic 12/50 Test #14: test-cyclic ......................... Passed 4.81 sec Start 15: test-delp2 13/50 Test #15: test-delp2 .......................... Passed 7.51 sec Start 16: test-datafile-facade 14/50 Test #16: test-datafile-facade ................ Passed 1.82 sec Start 17: test-drift-instability 15/50 Test #17: test-drift-instability .............. Passed 3.00 sec Start 18: test-drift-instability-staggered 16/50 Test #18: test-drift-instability-staggered .... Passed 3.11 sec Start 19: test-fieldgroupComm 17/50 Test #19: test-fieldgroupComm ................. Passed 2.00 sec Start 20: test-fci-boundary 18/50 Test #20: test-fci-boundary ................... Passed 1.20 sec Start 21: test-griddata 19/50 Test #21: test-griddata ....................... Passed 0.83 sec Start 22: test-griddata-yboundary-guards 20/50 Test #22: test-griddata-yboundary-guards ...... Passed 5.56 sec Start 23: test-gyro 21/50 Test #23: test-gyro ........................... Passed 1.74 sec Start 24: test-initial 22/50 Test #24: test-initial ........................ Passed 5.26 sec Start 25: test-interchange-instability 23/50 Test #25: test-interchange-instability ........ Passed 6.51 sec Start 26: test-interpolate 24/50 Test #26: test-interpolate .................... Passed 5.44 sec Start 27: test-interpolate-z 25/50 Test #27: test-interpolate-z .................. Passed 2.13 sec Start 28: test-invertable-operator 26/50 Test #28: test-invertable-operator ............ Passed 1.27 sec Start 29: test-invpar 27/50 Test #29: test-invpar ......................... Passed 2.75 sec Start 30: test-laplace 28/50 Test #30: test-laplace ........................ Passed 6.79 sec Start 31: test-laplace-petsc3d 29/50 Test #31: test-laplace-petsc3d ................ Passed 5.38 sec Start 32: test-laplacexy-fv 30/50 Test #32: test-laplacexy-fv ................... Passed 445.44 sec Start 33: test-laplacexy-short 31/50 Test #33: test-laplacexy-short ................ Passed 1373.73 sec Start 34: test-laplacexz 32/50 Test #34: test-laplacexz ...................... Passed 1.80 sec Start 35: test-multigrid-laplace 33/50 Test #35: test-multigrid-laplace .............. Passed 2.42 sec Start 36: test-naulin-laplace 34/50 Test #36: test-naulin-laplace ................. Passed 1.46 sec Start 37: test-options-netcdf 35/50 Test #37: test-options-netcdf ................. Passed 0.84 sec Start 38: test-petsc-laplace 36/50 Test #38: test-petsc-laplace .................. Passed 2.92 sec Start 39: test-petsc-laplace-MAST-grid 37/50 Test #39: test-petsc-laplace-MAST-grid ........ Passed 10.92 sec Start 40: test-restart-io 38/50 Test #40: test-restart-io ..................... Passed 3.35 sec Start 41: test-restarting 39/50 Test #41: test-restarting ..................... Passed 2.78 sec Start 42: test-smooth 40/50 Test #42: test-smooth ......................... Passed 2.19 sec Start 43: test-snb 41/50 Test #43: test-snb ............................ Passed 0.33 sec Start 44: test-solver 42/50 Test #44: test-solver ......................... Passed 1.77 sec Start 45: test-squash 43/50 Test #45: test-squash ......................... Passed 7.32 sec Start 46: test-stopCheck 44/50 Test #46: test-stopCheck ...................... Passed 0.36 sec Start 47: test-stopCheck-file 45/50 Test #47: test-stopCheck-file ................. Passed 2.82 sec Start 48: test-twistshift 46/50 Test #48: test-twistshift ..................... Passed 0.87 sec Start 49: test-twistshift-staggered 47/50 Test #49: test-twistshift-staggered ........... Passed 0.87 sec Start 50: test-vec 48/50 Test #50: test-vec ............................ Passed 0.68 sec Start 51: test-yupdown 49/50 Test #51: test-yupdown ........................ Passed 1.27 sec Start 52: test-yupdown-weights 50/50 Test #52: test-yupdown-weights ................ Passed 0.86 sec 100% tests passed, 0 tests failed out of 50 Total Test time (real) = 1949.76 sec make[3]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' Built target check-integrated-tests make[2]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/build_mpich' + popd ~/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0 + '[' mpich = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=$' \t\n' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/mpich/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/mpich/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode=$'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=$' \t\n' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval $'_module_raw() {\n eval "$(/usr/bin/tclsh \'/usr/share/Modules/libexec/modulecmd.tcl\' sh "$@")";\n _mlstatus=$?;\n return $_mlstatus;\n};\nmodule() {\n local _mlredir=0;\n if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then\n if [ "$MODULES_REDIRECT_OUTPUT" = \'0\' ]; then\n _mlredir=0;\n elif [ "$MODULES_REDIRECT_OUTPUT" = \'1\' ]; then\n _mlredir=1;\n fi;\n fi;\n case " $@ " in\n *\' --no-redirect \'*) _mlredir=0 ;;\n *\' --redirect \'*) _mlredir=1 ;;\n esac;\n if [ $_mlredir -eq 0 ]; then\n _module_raw "$@";\n else\n _module_raw "$@" 2>&1;\n fi;\n};\nml() { module ml "$@"; };\nMODULES_CMD=\'/usr/share/Modules/libexec/modulecmd.tcl\'; export MODULES_CMD;\nunset __MODULES_AUTOINIT_INPROGRESS;\nMODULESHOME=\'/usr/share/Modules\'; export MODULESHOME;\ntest 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/mpich-x86_64 + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/mpich-x86_64 ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-x86_64 + eval $'unset LD_LIBRARY_PATH;\nunset MPI_COMPILER;\nMANPATH=\'/usr/share/man:\'; export MANPATH;\nunset MPI_INCLUDE;\nunset MPI_MAN;\nunset MPI_PYTHON_SITEARCH;\nunset _LMFILES_;\nunset LOADEDMODULES;\nunset CMAKE_PREFIX_PATH;\nPKG_CONFIG_PATH=\':/usr/lib64/pkgconfig:/usr/share/pkgconfig\'; export PKG_CONFIG_PATH;\nunset MPI_PYTHON3_SITEARCH;\nunset MPI_FORTRAN_MOD_DIR;\nunset MPI_HOME;\nunset __MODULES_LMCONFLICT;\n__MODULES_SHARE_MANPATH=\':1\'; export __MODULES_SHARE_MANPATH;\nunset MPI_SYSCONFIG;\nunset MPI_SUFFIX;\n__MODULES_SHARE_PKG_CONFIG_PATH=\':1\'; export __MODULES_SHARE_PKG_CONFIG_PATH;\nunset MPI_PYTHON2_SITEARCH;\nunset MPI_LIB;\nPATH=\'/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin\'; export PATH;\nunset MPI_BIN;\ntest 0;' ++ unset LD_LIBRARY_PATH ++ unset MPI_COMPILER ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ unset CMAKE_PREFIX_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SYSCONFIG ++ unset MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + RPM_EC=0 ++ jobs -p + exit 0 Processing files: bout++-mpich-5.2.0-4.fc44.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.TtgHOh + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0-build + cd BOUT++-v5.2.0 + DOCDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-mpich + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-mpich + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/README.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-mpich + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CITATION.bib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-mpich + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CITATION.cff /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-mpich + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CHANGELOG.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-mpich + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CONTRIBUTING.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-mpich + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.CmqZiT + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0-build + cd BOUT++-v5.2.0 + LICENSEDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-mpich + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-mpich + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/LICENSE /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-mpich + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/LICENSE.GPL /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-mpich + RPM_EC=0 ++ jobs -p + exit 0 Provides: bout++-mpich = 5.2.0-4.fc44 bout++-mpich(x86-64) = 5.2.0-4.fc44 bundled(libpvode) libbout++.so.5.2.0()(64bit)(mpich-x86_64) libpvode.so.1.0.0()(64bit)(mpich-x86_64) libpvpre.so.1.0.0()(64bit)(mpich-x86_64) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/bash /usr/bin/python3 /usr/bin/sh libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libfftw3.so.3()(64bit) libflexiblas.so.3()(64bit) libfmt.so.11()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmpi.so.12()(64bit)(mpich-x86_64) libnetcdf.so.22()(64bit) libnetcdf_c++4.so.1()(64bit) libpetsc.so.3.24()(64bit)(mpich-x86_64) libpvode.so.1.0.0()(64bit)(mpich-x86_64) libpvpre.so.1.0.0()(64bit)(mpich-x86_64) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsundials_arkode.so.6()(64bit)(mpich-x86_64) libsundials_core.so.7()(64bit)(mpich-x86_64) libsundials_cvode.so.7()(64bit)(mpich-x86_64) libsundials_ida.so.7()(64bit)(mpich-x86_64) libsundials_nvecparallel.so.7()(64bit)(mpich-x86_64) rtld(GNU_HASH) Recommends: environment-modules python3-boutdata python3-boututils python3-xbout Processing files: bout++-mpich-devel-5.2.0-4.fc44.x86_64 Provides: bout++-mpich-devel = 5.2.0-4.fc44 bout++-mpich-devel(x86-64) = 5.2.0-4.fc44 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: fftw-devel flexiblas-devel gcc-c++ gettext-devel hdf5-devel hdf5-mpich-devel make mpark-variant-devel mpich-devel netcdf-cxx4-devel netcdf-devel petsc-mpich-devel sundials-devel sundials-mpich-devel zlib-devel Processing files: python3-bout++-mpich-5.2.0-4.fc44.x86_64 Provides: libboutpp.cpython-314-x86_64-linux-gnu.so()(64bit)(mpich-x86_64) python-bout++-mpich = 5.2.0-4.fc44 python3-bout++-mpich = 5.2.0-4.fc44 python3-bout++-mpich(x86-64) = 5.2.0-4.fc44 python3.14-bout++-mpich = 5.2.0-4.fc44 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libbout++.so.5.2.0()(64bit)(mpich-x86_64) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libfmt.so.11()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.14 rtld(GNU_HASH) Recommends: python3-xbout Processing files: bout++-openmpi-5.2.0-4.fc44.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.wQjb62 + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0-build + cd BOUT++-v5.2.0 + DOCDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-openmpi + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-openmpi + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/README.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-openmpi + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CITATION.bib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-openmpi + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CITATION.cff /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-openmpi + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CHANGELOG.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-openmpi + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CONTRIBUTING.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/bout++-openmpi + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.sNH0X5 + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0-build + cd BOUT++-v5.2.0 + LICENSEDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-openmpi + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-openmpi + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/LICENSE /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-openmpi + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/LICENSE.GPL /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/bout++-openmpi + RPM_EC=0 ++ jobs -p + exit 0 Provides: bout++-openmpi = 5.2.0-4.fc44 bout++-openmpi(x86-64) = 5.2.0-4.fc44 bundled(libpvode) libbout++.so.5.2.0()(64bit)(openmpi-x86_64) libpvode.so.1.0.0()(64bit)(openmpi-x86_64) libpvpre.so.1.0.0()(64bit)(openmpi-x86_64) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/bash /usr/bin/python3 /usr/bin/sh libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libfftw3.so.3()(64bit) libflexiblas.so.3()(64bit) libfmt.so.11()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmpi.so.40()(64bit)(openmpi-x86_64) libnetcdf.so.22()(64bit) libnetcdf_c++4.so.1()(64bit) libpetsc.so.3.24()(64bit)(openmpi-x86_64) libpvode.so.1.0.0()(64bit)(openmpi-x86_64) libpvpre.so.1.0.0()(64bit)(openmpi-x86_64) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsundials_arkode.so.6()(64bit)(openmpi-x86_64) libsundials_core.so.7()(64bit)(openmpi-x86_64) libsundials_cvode.so.7()(64bit)(openmpi-x86_64) libsundials_ida.so.7()(64bit)(openmpi-x86_64) libsundials_nvecparallel.so.7()(64bit)(openmpi-x86_64) rtld(GNU_HASH) Recommends: environment-modules python3-boutdata python3-boututils python3-xbout Processing files: bout++-openmpi-devel-5.2.0-4.fc44.x86_64 Provides: bout++-openmpi-devel = 5.2.0-4.fc44 bout++-openmpi-devel(x86-64) = 5.2.0-4.fc44 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: fftw-devel flexiblas-devel gcc-c++ gettext-devel hdf5-devel hdf5-openmpi-devel make mpark-variant-devel netcdf-cxx4-devel netcdf-devel openmpi-devel petsc-openmpi-devel sundials-devel sundials-openmpi-devel zlib-devel Processing files: python3-bout++-openmpi-5.2.0-4.fc44.x86_64 Provides: libboutpp.cpython-314-x86_64-linux-gnu.so()(64bit)(openmpi-x86_64) python-bout++-openmpi = 5.2.0-4.fc44 python3-bout++-openmpi = 5.2.0-4.fc44 python3-bout++-openmpi(x86-64) = 5.2.0-4.fc44 python3.14-bout++-openmpi = 5.2.0-4.fc44 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libbout++.so.5.2.0()(64bit)(openmpi-x86_64) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libfmt.so.11()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.14 rtld(GNU_HASH) Recommends: python3-xbout Processing files: bout++-common-5.2.0-4.fc44.x86_64 Provides: bout++-common = 5.2.0-4.fc44 bout++-common(x86-64) = 5.2.0-4.fc44 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-bout++-5.2.0-4.fc44.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.y6JWgb + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0-build + cd BOUT++-v5.2.0 + DOCDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/python3-bout++ + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/python3-bout++ + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/README.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/python3-bout++ + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CITATION.bib /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/python3-bout++ + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CITATION.cff /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/python3-bout++ + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CHANGELOG.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/python3-bout++ + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/CONTRIBUTING.md /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/doc/python3-bout++ + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.b587lj + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0-build + cd BOUT++-v5.2.0 + LICENSEDIR=/builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/python3-bout++ + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/python3-bout++ + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/LICENSE /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/python3-bout++ + cp -pr /builddir/build/BUILD/bout++-5.2.0-build/BOUT++-v5.2.0/LICENSE.GPL /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT/usr/share/licenses/python3-bout++ + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-bout++ = 5.2.0-4.fc44 python3-bout++ = 5.2.0-4.fc44 python3.14-bout++ = 5.2.0-4.fc44 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: python3-boutdata python3-boututils python3-matplotlib python3-scipy Processing files: bout++-doc-5.2.0-4.fc44.noarch Provides: bout++-doc = 5.2.0-4.fc44 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: bout++-debugsource-5.2.0-4.fc44.x86_64 Provides: bout++-debugsource = 5.2.0-4.fc44 bout++-debugsource(x86-64) = 5.2.0-4.fc44 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: bout++-debuginfo-5.2.0-4.fc44.x86_64 Provides: bout++-debuginfo = 5.2.0-4.fc44 bout++-debuginfo(x86-64) = 5.2.0-4.fc44 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: bout++-debugsource(x86-64) = 5.2.0-4.fc44 Processing files: bout++-mpich-debuginfo-5.2.0-4.fc44.x86_64 Provides: bout++-mpich-debuginfo = 5.2.0-4.fc44 bout++-mpich-debuginfo(x86-64) = 5.2.0-4.fc44 debuginfo(build-id) = 208321f8a5d90ecd7dfc46fc436e0c3edeb8542a debuginfo(build-id) = 4f70e8e36ac4c3d2da97cc16a56d98410c47d03f debuginfo(build-id) = 9ac04954b407340a244ec6d9ddbffbd0e5016ca5 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: bout++-debugsource(x86-64) = 5.2.0-4.fc44 Processing files: python3-bout++-mpich-debuginfo-5.2.0-4.fc44.x86_64 Provides: debuginfo(build-id) = 234eeb17682eb5bc244f86835b24d95b60b125f9 python-bout++-mpich-debuginfo = 5.2.0-4.fc44 python3-bout++-mpich-debuginfo = 5.2.0-4.fc44 python3-bout++-mpich-debuginfo(x86-64) = 5.2.0-4.fc44 python3.14-bout++-mpich-debuginfo = 5.2.0-4.fc44 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: bout++-debugsource(x86-64) = 5.2.0-4.fc44 Processing files: bout++-openmpi-debuginfo-5.2.0-4.fc44.x86_64 Provides: bout++-openmpi-debuginfo = 5.2.0-4.fc44 bout++-openmpi-debuginfo(x86-64) = 5.2.0-4.fc44 debuginfo(build-id) = 0104c8b1e811cb3cde860f13f87b5d50dfd8b760 debuginfo(build-id) = 60d386c959b534b58b53ea20c1469a2d5d43e629 debuginfo(build-id) = 95d31e622989876ac3f53ba75fec42606f25fb8e Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: bout++-debugsource(x86-64) = 5.2.0-4.fc44 Processing files: python3-bout++-openmpi-debuginfo-5.2.0-4.fc44.x86_64 Provides: debuginfo(build-id) = 02e8ebf84b0cc646a7036eea363dea0b8fe8fdb8 python-bout++-openmpi-debuginfo = 5.2.0-4.fc44 python3-bout++-openmpi-debuginfo = 5.2.0-4.fc44 python3-bout++-openmpi-debuginfo(x86-64) = 5.2.0-4.fc44 python3.14-bout++-openmpi-debuginfo = 5.2.0-4.fc44 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: bout++-debugsource(x86-64) = 5.2.0-4.fc44 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/bout++-5.2.0-build/BUILDROOT Wrote: /builddir/build/RPMS/python3-bout++-openmpi-debuginfo-5.2.0-4.fc44.x86_64.rpm Wrote: /builddir/build/RPMS/python3-bout++-mpich-debuginfo-5.2.0-4.fc44.x86_64.rpm Wrote: /builddir/build/RPMS/bout++-debugsource-5.2.0-4.fc44.x86_64.rpm Wrote: /builddir/build/RPMS/bout++-debuginfo-5.2.0-4.fc44.x86_64.rpm Wrote: /builddir/build/RPMS/bout++-doc-5.2.0-4.fc44.noarch.rpm Wrote: /builddir/build/RPMS/bout++-openmpi-5.2.0-4.fc44.x86_64.rpm Wrote: /builddir/build/RPMS/bout++-openmpi-devel-5.2.0-4.fc44.x86_64.rpm Wrote: /builddir/build/RPMS/bout++-mpich-5.2.0-4.fc44.x86_64.rpm Wrote: /builddir/build/RPMS/bout++-mpich-devel-5.2.0-4.fc44.x86_64.rpm Wrote: /builddir/build/RPMS/python3-bout++-openmpi-5.2.0-4.fc44.x86_64.rpm Wrote: /builddir/build/RPMS/python3-bout++-5.2.0-4.fc44.noarch.rpm Wrote: /builddir/build/RPMS/bout++-common-5.2.0-4.fc44.x86_64.rpm Wrote: /builddir/build/RPMS/python3-bout++-mpich-5.2.0-4.fc44.x86_64.rpm Wrote: /builddir/build/RPMS/bout++-mpich-debuginfo-5.2.0-4.fc44.x86_64.rpm Wrote: /builddir/build/RPMS/bout++-openmpi-debuginfo-5.2.0-4.fc44.x86_64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.MefXL5 + umask 022 + cd /builddir/build/BUILD/bout++-5.2.0-build + test -d /builddir/build/BUILD/bout++-5.2.0-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/bout++-5.2.0-build + rm -rf /builddir/build/BUILD/bout++-5.2.0-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild bout++-5.2.0-4.fc44.src.rpm Finish: build phase for bout++-5.2.0-4.fc44.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1765453338.506648/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names INFO: Done(/var/lib/copr-rpmbuild/results/bout++-5.2.0-4.fc44.src.rpm) Config(child) 90 minutes 12 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "bout++-mpich-devel", "epoch": null, "version": "5.2.0", "release": "4.fc44", "arch": "x86_64" }, { "name": "python3-bout++-mpich", "epoch": null, "version": "5.2.0", "release": "4.fc44", "arch": "x86_64" }, { "name": "bout++-openmpi", "epoch": null, "version": "5.2.0", "release": "4.fc44", "arch": "x86_64" }, { "name": "python3-bout++-openmpi", "epoch": null, "version": "5.2.0", "release": "4.fc44", "arch": "x86_64" }, { "name": "bout++-doc", "epoch": null, "version": "5.2.0", "release": "4.fc44", "arch": "noarch" }, { "name": "python3-bout++-mpich-debuginfo", "epoch": null, "version": "5.2.0", "release": "4.fc44", "arch": "x86_64" }, { "name": "bout++-mpich", "epoch": null, "version": "5.2.0", "release": "4.fc44", "arch": "x86_64" }, { "name": "python3-bout++-openmpi-debuginfo", "epoch": null, "version": "5.2.0", "release": "4.fc44", "arch": "x86_64" }, { "name": "bout++-debuginfo", "epoch": null, "version": "5.2.0", "release": "4.fc44", "arch": "x86_64" }, { "name": "python3-bout++", "epoch": null, "version": "5.2.0", "release": "4.fc44", "arch": "noarch" }, { "name": "bout++", "epoch": null, "version": "5.2.0", "release": "4.fc44", "arch": "src" }, { "name": "bout++-openmpi-debuginfo", "epoch": null, "version": "5.2.0", "release": "4.fc44", "arch": "x86_64" }, { "name": "bout++-mpich-debuginfo", "epoch": null, "version": "5.2.0", "release": "4.fc44", "arch": "x86_64" }, { "name": "bout++-debugsource", "epoch": null, "version": "5.2.0", "release": "4.fc44", "arch": "x86_64" }, { "name": "bout++-common", "epoch": null, "version": "5.2.0", "release": "4.fc44", "arch": "x86_64" }, { "name": "bout++-openmpi-devel", "epoch": null, "version": "5.2.0", "release": "4.fc44", "arch": "x86_64" } ] } RPMResults finished