Warning: Permanently added '54.198.22.44' (ED25519) to the list of known hosts.
You can reproduce this build on your computer by running:
sudo dnf install copr-rpmbuild
/usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8430685-fedora-rawhide-aarch64 --chroot fedora-rawhide-aarch64
Version: 1.2
PID: 9000
Logging PID: 9001
Task:
{'allow_user_ssh': False,
'appstream': False,
'background': True,
'build_id': 8430685,
'buildroot_pkgs': [],
'chroot': 'fedora-rawhide-aarch64',
'enable_net': False,
'fedora_review': False,
'git_hash': '8dfc40a0bafa39ac3f2b98ba7ebc1fc7e3d0b18d',
'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/dmalcolm/gcc-15-smoketest-3/smoldyn',
'isolation': 'default',
'memory_reqs': 2048,
'package_name': 'smoldyn',
'package_version': '2.72-5',
'project_dirname': 'gcc-15-smoketest-3',
'project_name': 'gcc-15-smoketest-3',
'project_owner': 'dmalcolm',
'repo_priority': None,
'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/dmalcolm/gcc-15-smoketest-3/fedora-rawhide-aarch64/',
'id': 'copr_base',
'name': 'Copr repository',
'priority': None},
{'baseurl': 'https://fedorapeople.org/~dmalcolm/gcc/gcc-15-mass-prebuild/$basearch',
'id': 'https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch',
'name': 'Additional repo https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch'}],
'sandbox': 'dmalcolm/gcc-15-smoketest-3--dmalcolm',
'source_json': {},
'source_type': None,
'ssh_public_keys': None,
'storage': 0,
'submitter': 'dmalcolm',
'tags': [],
'task_id': '8430685-fedora-rawhide-aarch64',
'timeout': 115200,
'uses_devel_repo': False,
'with_opts': [],
'without_opts': []}
Running: git clone https://copr-dist-git.fedorainfracloud.org/git/dmalcolm/gcc-15-smoketest-3/smoldyn /var/lib/copr-rpmbuild/workspace/workdir-k_l85nn6/smoldyn --depth 500 --no-single-branch --recursive
cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/dmalcolm/gcc-15-smoketest-3/smoldyn', '/var/lib/copr-rpmbuild/workspace/workdir-k_l85nn6/smoldyn', '--depth', '500', '--no-single-branch', '--recursive']
cwd: .
rc: 0
stdout:
stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-k_l85nn6/smoldyn'...
Running: git checkout 8dfc40a0bafa39ac3f2b98ba7ebc1fc7e3d0b18d --
cmd: ['git', 'checkout', '8dfc40a0bafa39ac3f2b98ba7ebc1fc7e3d0b18d', '--']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-k_l85nn6/smoldyn
rc: 0
stdout:
stderr: Note: switching to '8dfc40a0bafa39ac3f2b98ba7ebc1fc7e3d0b18d'.
You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.
If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:
git switch -c <new-branch-name>
Or undo this operation with:
git switch -
Turn off this advice by setting config variable advice.detachedHead to false
HEAD is now at 8dfc40a automatic import of smoldyn
Running: dist-git-client sources
cmd: ['dist-git-client', 'sources']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-k_l85nn6/smoldyn
rc: 0
stdout:
stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD
INFO: Reading stdout from command: git rev-parse HEAD
INFO: Reading sources specification file: sources
INFO: Downloading Smoldyn-2.72.tar.gz
INFO: Reading stdout from command: curl --help all
INFO: Calling: curl -H Pragma: -o Smoldyn-2.72.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/dmalcolm/gcc-15-smoketest-3/smoldyn/Smoldyn-2.72.tar.gz/md5/55177f82859a034ac5418e6894089192/Smoldyn-2.72.tar.gz
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
100 96.4M 100 96.4M 0 0 27.0M 0 0:00:03 0:00:03 --:--:-- 27.0M
INFO: Reading stdout from command: md5sum Smoldyn-2.72.tar.gz
/usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated
Running (timeout=115200): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-k_l85nn6/smoldyn/smoldyn.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-k_l85nn6/smoldyn --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1734872166.924324 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 6.0 starting (python version = 3.13.0, NVR = mock-6.0-1.fc41), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-k_l85nn6/smoldyn/smoldyn.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-k_l85nn6/smoldyn --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1734872166.924324 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
Start(bootstrap): init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish(bootstrap): init plugins
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-k_l85nn6/smoldyn/smoldyn.spec) Config(fedora-rawhide-aarch64)
Start: clean chroot
Finish: clean chroot
Mock Version: 6.0
INFO: Mock Version: 6.0
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1734872166.924324/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
INFO: Guessed host environment type: unknown
INFO: Using container image: registry.fedoraproject.org/fedora:rawhide
INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide
INFO: Tagging container image as mock-bootstrap-863b000b-c4a5-4519-a013-f06415561e3f
INFO: Checking that 72b21bcd6e1d92e4a103a75cb251c27a4cb6e767088b169f430e58afbfc15414 image matches host's architecture
INFO: Copy content of container 72b21bcd6e1d92e4a103a75cb251c27a4cb6e767088b169f430e58afbfc15414 to /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1734872166.924324/root
INFO: mounting 72b21bcd6e1d92e4a103a75cb251c27a4cb6e767088b169f430e58afbfc15414 with podman image mount
INFO: image 72b21bcd6e1d92e4a103a75cb251c27a4cb6e767088b169f430e58afbfc15414 as /var/lib/containers/storage/overlay/fafa28ff4385f12f4516fa483e755b1eb92586d70d99f7a5ad8577e28ec32290/merged
INFO: umounting image 72b21bcd6e1d92e4a103a75cb251c27a4cb6e767088b169f430e58afbfc15414 (/var/lib/containers/storage/overlay/fafa28ff4385f12f4516fa483e755b1eb92586d70d99f7a5ad8577e28ec32290/merged) with podman image umount
INFO: Removing image mock-bootstrap-863b000b-c4a5-4519-a013-f06415561e3f
INFO: Package manager dnf5 detected and used (fallback)
INFO: Not updating bootstrap chroot, bootstrap_image_ready=True
Start(bootstrap): creating root cache
Finish(bootstrap): creating root cache
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1734872166.924324/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Package manager dnf5 detected and used (direct choice)
INFO: Buildroot is handled by package management downloaded with a bootstrap image:
rpm-4.20.0-1.fc42.aarch64
rpm-sequoia-1.7.0-3.fc42.aarch64
dnf5-5.2.8.1-2.fc42.aarch64
dnf5-plugins-5.2.8.1-2.fc42.aarch64
Start: installing minimal buildroot with dnf5
Updating and loading repositories:
fedora 100% | 25.7 MiB/s | 20.9 MiB | 00m01s
Copr repository 100% | 137.0 MiB/s | 8.8 MiB | 00m00s
Additional repo https_fedorapeople_org 100% | 98.8 KiB/s | 15.9 KiB | 00m00s
Repositories loaded.
Package Arch Version Repository Size
Installing group/module packages:
bash aarch64 5.2.37-1.fc42 fedora 8.2 MiB
bzip2 aarch64 1.0.8-19.fc42 copr_base 168.7 KiB
coreutils aarch64 9.5-11.fc42 copr_base 7.9 MiB
cpio aarch64 2.15-2.fc41 fedora 1.2 MiB
diffutils aarch64 3.10-8.fc42 copr_base 1.7 MiB
fedora-release-common noarch 42-0.11 fedora 19.8 KiB
findutils aarch64 1:4.10.0-4.fc42 copr_base 1.9 MiB
gawk aarch64 5.3.0-4.fc41 fedora 4.2 MiB
glibc-minimal-langpack aarch64 2.40.9000-24.fc42 copr_base 0.0 B
grep aarch64 3.11-9.fc42 copr_base 1.0 MiB
gzip aarch64 1.13-2.fc42 copr_base 422.7 KiB
info aarch64 7.1.1-2.fc42 fedora 613.6 KiB
patch aarch64 2.7.6-25.fc42 copr_base 259.0 KiB
redhat-rpm-config noarch 300-1.no_annobin.0.fc42 copr_base 186.6 KiB
rpm-build aarch64 4.20.0-1.fc42 copr_base 516.9 KiB
sed aarch64 4.9-3.fc42 copr_base 870.8 KiB
shadow-utils aarch64 2:4.17.0~rc1-1.fc42 copr_base 4.5 MiB
tar aarch64 2:1.35-4.fc41 fedora 3.1 MiB
unzip aarch64 6.0-65.fc42 fedora 2.3 MiB
util-linux aarch64 2.40.2-8.fc42 fedora 16.9 MiB
which aarch64 2.21-42.fc41 fedora 248.2 KiB
xz aarch64 1:5.6.3-2.fc42 fedora 1.5 MiB
Installing dependencies:
add-determinism aarch64 0.4.3-1.fc42 copr_base 2.0 MiB
alternatives aarch64 1.31-1.fc42 fedora 88.7 KiB
ansible-srpm-macros noarch 1-16.fc41 fedora 35.7 KiB
audit-libs aarch64 4.0.2-1.fc42 copr_base 415.2 KiB
authselect aarch64 1.5.0-8.fc42 copr_base 179.9 KiB
authselect-libs aarch64 1.5.0-8.fc42 copr_base 865.5 KiB
basesystem noarch 11-21.fc41 fedora 0.0 B
binutils aarch64 2.43.50-9.fc42 copr_base 28.9 MiB
build-reproducibility-srpm-macros noarch 0.4.3-1.fc42 copr_base 735.0 B
bzip2-libs aarch64 1.0.8-19.fc42 copr_base 135.1 KiB
ca-certificates noarch 2024.2.69_v8.0.401-3.fc42 fedora 2.6 MiB
coreutils-common aarch64 9.5-11.fc42 copr_base 11.2 MiB
cracklib aarch64 2.9.11-6.fc42 copr_base 417.7 KiB
crypto-policies noarch 20241128-1.gitbb7b0b0.fc42 fedora 137.3 KiB
curl aarch64 8.11.1-2.fc42 copr_base 451.9 KiB
cyrus-sasl-lib aarch64 2.1.28-27.fc41 fedora 3.1 MiB
debugedit aarch64 5.1-2.fc42 copr_base 241.5 KiB
dwz aarch64 0.15-8.fc42 copr_base 319.6 KiB
ed aarch64 1.20.2-2.fc41 fedora 282.8 KiB
efi-srpm-macros noarch 5-13.fc42 fedora 40.2 KiB
elfutils aarch64 0.192-7.fc42 copr_base 3.0 MiB
elfutils-debuginfod-client aarch64 0.192-7.fc42 copr_base 141.3 KiB
elfutils-default-yama-scope noarch 0.192-7.fc42 copr_base 1.8 KiB
elfutils-libelf aarch64 0.192-7.fc42 copr_base 1.2 MiB
elfutils-libs aarch64 0.192-7.fc42 copr_base 734.9 KiB
fedora-gpg-keys noarch 42-0.3 fedora 126.4 KiB
fedora-release noarch 42-0.11 fedora 0.0 B
fedora-release-identity-basic noarch 42-0.11 fedora 719.0 B
fedora-repos noarch 42-0.3 fedora 4.9 KiB
fedora-repos-rawhide noarch 42-0.3 fedora 2.2 KiB
file aarch64 5.45-8.fc42 fedora 139.5 KiB
file-libs aarch64 5.45-8.fc42 fedora 10.0 MiB
filesystem aarch64 3.18-29.fc42 fedora 106.0 B
filesystem-srpm-macros noarch 3.18-29.fc42 fedora 36.1 KiB
fonts-srpm-macros noarch 1:2.0.5-17.fc41 fedora 55.8 KiB
forge-srpm-macros noarch 0.4.0-1.fc42 fedora 38.9 KiB
fpc-srpm-macros noarch 1.3-13.fc41 fedora 144.0 B
gdb-minimal aarch64 15.2-4.fc42 copr_base 12.6 MiB
gdbm aarch64 1:1.23-7.fc41 fedora 928.5 KiB
gdbm-libs aarch64 1:1.23-7.fc41 fedora 426.0 KiB
ghc-srpm-macros noarch 1.9.2-1.fc42 fedora 779.0 B
glibc aarch64 2.40.9000-24.fc42 copr_base 6.0 MiB
glibc-common aarch64 2.40.9000-24.fc42 copr_base 1.3 MiB
glibc-gconv-extra aarch64 2.40.9000-24.fc42 copr_base 18.3 MiB
gmp aarch64 1:6.3.0-2.fc41 fedora 722.0 KiB
gnat-srpm-macros noarch 6-6.fc41 fedora 1.0 KiB
go-srpm-macros noarch 3.6.0-5.fc42 fedora 60.8 KiB
jansson aarch64 2.14-1.fc42 copr_base 90.8 KiB
json-c aarch64 0.18-1.fc42 copr_base 135.7 KiB
kernel-srpm-macros noarch 1.0-24.fc41 fedora 1.9 KiB
keyutils-libs aarch64 1.6.3-4.fc42 copr_base 96.8 KiB
krb5-libs aarch64 1.21.3-3.fc42 copr_base 2.5 MiB
libacl aarch64 2.3.2-2.fc42 copr_base 66.3 KiB
libarchive aarch64 3.7.7-1.fc42 copr_base 899.2 KiB
libattr aarch64 2.5.2-4.fc41 fedora 196.6 KiB
libblkid aarch64 2.40.2-8.fc42 fedora 418.6 KiB
libbrotli aarch64 1.1.0-5.fc42 copr_base 904.3 KiB
libcap aarch64 2.71-1.fc42 copr_base 498.5 KiB
libcap-ng aarch64 0.8.5-3.fc42 copr_base 158.7 KiB
libcom_err aarch64 1.47.1-6.fc42 fedora 239.3 KiB
libcurl aarch64 8.11.1-2.fc42 copr_base 845.2 KiB
libeconf aarch64 0.7.5-1.fc42 copr_base 78.7 KiB
libevent aarch64 2.1.12-14.fc42 copr_base 1.1 MiB
libfdisk aarch64 2.40.2-8.fc42 fedora 482.9 KiB
libffi aarch64 3.4.6-3.fc42 fedora 282.4 KiB
libgcc aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 218.8 KiB
libgomp aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 501.0 KiB
libidn2 aarch64 2.3.7-2.fc42 copr_base 327.7 KiB
libmount aarch64 2.40.2-8.fc42 fedora 483.9 KiB
libnghttp2 aarch64 1.64.0-1.fc42 fedora 262.2 KiB
libnsl2 aarch64 2.0.1-2.fc42 copr_base 92.3 KiB
libpkgconf aarch64 2.3.0-1.fc42 copr_base 132.0 KiB
libpsl aarch64 0.21.5-4.fc42 copr_base 131.2 KiB
libpwquality aarch64 1.4.5-11.fc42 copr_base 604.7 KiB
libselinux aarch64 3.8-0.rc3.1.fc42 fedora 195.6 KiB
libsemanage aarch64 3.8-0.rc3.1.fc42 fedora 353.3 KiB
libsepol aarch64 3.8-0.rc3.1.fc42 fedora 796.3 KiB
libsmartcols aarch64 2.40.2-8.fc42 fedora 288.5 KiB
libssh aarch64 0.11.1-1.fc42 copr_base 575.7 KiB
libssh-config noarch 0.11.1-1.fc42 copr_base 277.0 B
libstdc++ aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 2.7 MiB
libtasn1 aarch64 4.19.0-9.fc42 copr_base 217.7 KiB
libtirpc aarch64 1.3.6-1.fc42 fedora 212.9 KiB
libtool-ltdl aarch64 2.5.4-1.fc42 copr_base 92.1 KiB
libunistring aarch64 1.1-8.fc42 copr_base 1.7 MiB
libuuid aarch64 2.40.2-8.fc42 fedora 197.5 KiB
libverto aarch64 0.3.2-9.fc41 fedora 197.5 KiB
libxcrypt aarch64 4.4.36-12.fc42 fedora 269.3 KiB
libxml2 aarch64 2.12.8-2.fc42 copr_base 1.9 MiB
libzstd aarch64 1.5.6-2.fc41 fedora 796.0 KiB
lua-libs aarch64 5.4.7-1.fc42 fedora 393.1 KiB
lua-srpm-macros noarch 1-14.fc41 fedora 1.3 KiB
lz4-libs aarch64 1.10.0-1.fc42 copr_base 195.5 KiB
mpfr aarch64 4.2.1-5.fc42 copr_base 748.3 KiB
ncurses-base noarch 6.5-2.20240629.fc41 fedora 326.3 KiB
ncurses-libs aarch64 6.5-2.20240629.fc41 fedora 2.2 MiB
ocaml-srpm-macros noarch 10-3.fc41 fedora 1.9 KiB
openblas-srpm-macros noarch 2-18.fc41 fedora 112.0 B
openldap aarch64 2.6.8-6.fc42 copr_base 747.0 KiB
openssl-libs aarch64 1:3.2.2-8.fc42 copr_base 6.3 MiB
p11-kit aarch64 0.25.5-4.fc42 copr_base 2.3 MiB
p11-kit-trust aarch64 0.25.5-4.fc42 copr_base 456.7 KiB
package-notes-srpm-macros noarch 0.5-12.fc41 fedora 1.6 KiB
pam aarch64 1.7.0-3.fc42 copr_base 4.2 MiB
pam-libs aarch64 1.7.0-3.fc42 copr_base 218.7 KiB
pcre2 aarch64 10.44-1.fc42.1 copr_base 644.5 KiB
pcre2-syntax noarch 10.44-1.fc42.1 copr_base 251.6 KiB
perl-srpm-macros noarch 1-56.fc41 fedora 861.0 B
pkgconf aarch64 2.3.0-1.fc42 copr_base 111.1 KiB
pkgconf-m4 noarch 2.3.0-1.fc42 copr_base 14.4 KiB
pkgconf-pkg-config aarch64 2.3.0-1.fc42 copr_base 990.0 B
popt aarch64 1.19-7.fc42 copr_base 142.9 KiB
publicsuffix-list-dafsa noarch 20240107-4.fc41 fedora 67.5 KiB
pyproject-srpm-macros noarch 1.16.3-1.fc42 fedora 1.9 KiB
python-srpm-macros noarch 3.13-3.fc41 fedora 51.0 KiB
qt5-srpm-macros noarch 5.15.15-1.fc42 copr_base 500.0 B
qt6-srpm-macros noarch 6.8.1-4.fc42 copr_base 456.0 B
readline aarch64 8.2-11.fc42 copr_base 553.5 KiB
rpm aarch64 4.20.0-1.fc42 copr_base 3.3 MiB
rpm-build-libs aarch64 4.20.0-1.fc42 copr_base 196.0 KiB
rpm-libs aarch64 4.20.0-1.fc42 copr_base 718.1 KiB
rpm-sequoia aarch64 1.7.0-3.fc42 copr_base 2.2 MiB
rust-srpm-macros noarch 26.3-3.fc42 fedora 4.8 KiB
setup noarch 2.15.0-5.fc41 fedora 720.7 KiB
sqlite-libs aarch64 3.47.2-1.fc42 fedora 1.4 MiB
systemd-libs aarch64 257.1-1.fc42 fedora 2.4 MiB
util-linux-core aarch64 2.40.2-8.fc42 fedora 6.2 MiB
xxhash-libs aarch64 0.8.2-4.fc42 fedora 212.3 KiB
xz-libs aarch64 1:5.6.3-2.fc42 fedora 266.4 KiB
zig-srpm-macros noarch 1-3.fc41 fedora 1.1 KiB
zip aarch64 3.0-42.fc42 fedora 755.7 KiB
zlib-ng-compat aarch64 2.2.2-1.fc42 fedora 133.8 KiB
zstd aarch64 1.5.6-2.fc41 fedora 1.7 MiB
Installing groups:
Buildsystem building group
Transaction Summary:
Installing: 155 packages
Total size of inbound packages is 50 MiB. Need to download 50 MiB.
After this operation, 226 MiB extra will be used (install 226 MiB, remove 0 B).
[ 1/155] fedora-release-common-0:42-0. 100% | 1.9 MiB/s | 23.9 KiB | 00m00s
[ 2/155] cpio-0:2.15-2.fc41.aarch64 100% | 15.8 MiB/s | 291.3 KiB | 00m00s
[ 3/155] gawk-0:5.3.0-4.fc41.aarch64 100% | 105.7 MiB/s | 1.1 MiB | 00m00s
[ 4/155] bash-0:5.2.37-1.fc42.aarch64 100% | 68.9 MiB/s | 1.8 MiB | 00m00s
[ 5/155] info-0:7.1.1-2.fc42.aarch64 100% | 22.1 MiB/s | 181.3 KiB | 00m00s
[ 6/155] tar-2:1.35-4.fc41.aarch64 100% | 119.2 MiB/s | 854.7 KiB | 00m00s
[ 7/155] unzip-0:6.0-65.fc42.aarch64 100% | 45.3 MiB/s | 185.5 KiB | 00m00s
[ 8/155] which-0:2.21-42.fc41.aarch64 100% | 20.2 MiB/s | 41.5 KiB | 00m00s
[ 9/155] util-linux-0:2.40.2-8.fc42.aa 100% | 130.2 MiB/s | 1.2 MiB | 00m00s
[ 10/155] xz-1:5.6.3-2.fc42.aarch64 100% | 77.5 MiB/s | 476.1 KiB | 00m00s
[ 11/155] bzip2-0:1.0.8-19.fc42.aarch64 100% | 5.4 MiB/s | 50.0 KiB | 00m00s
[ 12/155] coreutils-0:9.5-11.fc42.aarch 100% | 74.9 MiB/s | 920.7 KiB | 00m00s
[ 13/155] findutils-1:4.10.0-4.fc42.aar 100% | 75.5 MiB/s | 541.0 KiB | 00m00s
[ 14/155] diffutils-0:3.10-8.fc42.aarch 100% | 31.6 MiB/s | 387.7 KiB | 00m00s
[ 15/155] glibc-minimal-langpack-0:2.40 100% | 39.9 MiB/s | 122.4 KiB | 00m00s
[ 16/155] grep-0:3.11-9.fc42.aarch64 100% | 92.9 MiB/s | 285.2 KiB | 00m00s
[ 17/155] gzip-0:1.13-2.fc42.aarch64 100% | 52.5 MiB/s | 161.1 KiB | 00m00s
[ 18/155] patch-0:2.7.6-25.fc42.aarch64 100% | 40.3 MiB/s | 123.7 KiB | 00m00s
[ 19/155] redhat-rpm-config-0:300-1.no_ 100% | 24.9 MiB/s | 76.6 KiB | 00m00s
[ 20/155] rpm-build-0:4.20.0-1.fc42.aar 100% | 22.3 MiB/s | 68.5 KiB | 00m00s
[ 21/155] sed-0:4.9-3.fc42.aarch64 100% | 74.4 MiB/s | 304.9 KiB | 00m00s
[ 22/155] filesystem-0:3.18-29.fc42.aar 100% | 181.1 MiB/s | 1.1 MiB | 00m00s
[ 23/155] ncurses-libs-0:6.5-2.20240629 100% | 63.8 MiB/s | 326.5 KiB | 00m00s
[ 24/155] fedora-repos-0:42-0.3.noarch 100% | 9.0 MiB/s | 9.2 KiB | 00m00s
[ 25/155] shadow-utils-2:4.17.0~rc1-1.f 100% | 111.0 MiB/s | 1.2 MiB | 00m00s
[ 26/155] gmp-1:6.3.0-2.fc41.aarch64 100% | 87.9 MiB/s | 270.1 KiB | 00m00s
[ 27/155] libblkid-0:2.40.2-8.fc42.aarc 100% | 40.4 MiB/s | 124.3 KiB | 00m00s
[ 28/155] libfdisk-0:2.40.2-8.fc42.aarc 100% | 50.7 MiB/s | 155.7 KiB | 00m00s
[ 29/155] libmount-0:2.40.2-8.fc42.aarc 100% | 75.5 MiB/s | 154.6 KiB | 00m00s
[ 30/155] libsmartcols-0:2.40.2-8.fc42. 100% | 27.0 MiB/s | 82.9 KiB | 00m00s
[ 31/155] libuuid-0:2.40.2-8.fc42.aarch 100% | 14.4 MiB/s | 29.5 KiB | 00m00s
[ 32/155] systemd-libs-0:257.1-1.fc42.a 100% | 183.0 MiB/s | 749.5 KiB | 00m00s
[ 33/155] zlib-ng-compat-0:2.2.2-1.fc42 100% | 21.4 MiB/s | 65.7 KiB | 00m00s
[ 34/155] util-linux-core-0:2.40.2-8.fc 100% | 103.9 MiB/s | 532.1 KiB | 00m00s
[ 35/155] libattr-0:2.5.2-4.fc41.aarch6 100% | 17.8 MiB/s | 18.2 KiB | 00m00s
[ 36/155] xz-libs-1:5.6.3-2.fc42.aarch6 100% | 36.2 MiB/s | 111.1 KiB | 00m00s
[ 37/155] ansible-srpm-macros-0:1-16.fc 100% | 20.3 MiB/s | 20.8 KiB | 00m00s
[ 38/155] ed-0:1.20.2-2.fc41.aarch64 100% | 39.6 MiB/s | 81.2 KiB | 00m00s
[ 39/155] efi-srpm-macros-0:5-13.fc42.n 100% | 11.0 MiB/s | 22.5 KiB | 00m00s
[ 40/155] file-0:5.45-8.fc42.aarch64 100% | 23.9 MiB/s | 49.0 KiB | 00m00s
[ 41/155] filesystem-srpm-macros-0:3.18 100% | 11.7 MiB/s | 23.9 KiB | 00m00s
[ 42/155] fonts-srpm-macros-1:2.0.5-17. 100% | 26.3 MiB/s | 27.0 KiB | 00m00s
[ 43/155] forge-srpm-macros-0:0.4.0-1.f 100% | 19.3 MiB/s | 19.8 KiB | 00m00s
[ 44/155] fpc-srpm-macros-0:1.3-13.fc41 100% | 7.8 MiB/s | 8.0 KiB | 00m00s
[ 45/155] ghc-srpm-macros-0:1.9.2-1.fc4 100% | 8.9 MiB/s | 9.1 KiB | 00m00s
[ 46/155] gnat-srpm-macros-0:6-6.fc41.n 100% | 8.7 MiB/s | 9.0 KiB | 00m00s
[ 47/155] kernel-srpm-macros-0:1.0-24.f 100% | 9.6 MiB/s | 9.9 KiB | 00m00s
[ 48/155] go-srpm-macros-0:3.6.0-5.fc42 100% | 13.7 MiB/s | 28.0 KiB | 00m00s
[ 49/155] lua-srpm-macros-0:1-14.fc41.n 100% | 8.7 MiB/s | 8.9 KiB | 00m00s
[ 50/155] ocaml-srpm-macros-0:10-3.fc41 100% | 9.0 MiB/s | 9.2 KiB | 00m00s
[ 51/155] openblas-srpm-macros-0:2-18.f 100% | 7.5 MiB/s | 7.7 KiB | 00m00s
[ 52/155] package-notes-srpm-macros-0:0 100% | 9.6 MiB/s | 9.8 KiB | 00m00s
[ 53/155] perl-srpm-macros-0:1-56.fc41. 100% | 8.3 MiB/s | 8.5 KiB | 00m00s
[ 54/155] pyproject-srpm-macros-0:1.16. 100% | 13.5 MiB/s | 13.9 KiB | 00m00s
[ 55/155] python-srpm-macros-0:3.13-3.f 100% | 11.6 MiB/s | 23.7 KiB | 00m00s
[ 56/155] rust-srpm-macros-0:26.3-3.fc4 100% | 5.9 MiB/s | 12.1 KiB | 00m00s
[ 57/155] zig-srpm-macros-0:1-3.fc41.no 100% | 4.0 MiB/s | 8.1 KiB | 00m00s
[ 58/155] zip-0:3.0-42.fc42.aarch64 100% | 83.0 MiB/s | 255.1 KiB | 00m00s
[ 59/155] zstd-0:1.5.6-2.fc41.aarch64 100% | 111.5 MiB/s | 456.8 KiB | 00m00s
[ 60/155] libxcrypt-0:4.4.36-12.fc42.aa 100% | 29.3 MiB/s | 119.8 KiB | 00m00s
[ 61/155] setup-0:2.15.0-5.fc41.noarch 100% | 50.3 MiB/s | 154.4 KiB | 00m00s
[ 62/155] ncurses-base-0:6.5-2.20240629 100% | 43.1 MiB/s | 88.4 KiB | 00m00s
[ 63/155] fedora-repos-rawhide-0:42-0.3 100% | 8.6 MiB/s | 8.8 KiB | 00m00s
[ 64/155] fedora-gpg-keys-0:42-0.3.noar 100% | 43.5 MiB/s | 133.6 KiB | 00m00s
[ 65/155] audit-libs-0:4.0.2-1.fc42.aar 100% | 40.4 MiB/s | 124.0 KiB | 00m00s
[ 66/155] file-libs-0:5.45-8.fc42.aarch 100% | 123.9 MiB/s | 761.3 KiB | 00m00s
[ 67/155] basesystem-0:11-21.fc41.noarc 100% | 3.6 MiB/s | 7.4 KiB | 00m00s
[ 68/155] glibc-0:2.40.9000-24.fc42.aar 100% | 201.0 MiB/s | 1.8 MiB | 00m00s
[ 69/155] libacl-0:2.3.2-2.fc42.aarch64 100% | 4.6 MiB/s | 23.4 KiB | 00m00s
[ 70/155] libeconf-0:0.7.5-1.fc42.aarch 100% | 6.6 MiB/s | 34.0 KiB | 00m00s
[ 71/155] libselinux-0:3.8-0.rc3.1.fc42 100% | 44.3 MiB/s | 90.7 KiB | 00m00s
[ 72/155] libsepol-0:3.8-0.rc3.1.fc42.a 100% | 103.1 MiB/s | 316.9 KiB | 00m00s
[ 73/155] libsemanage-0:3.8-0.rc3.1.fc4 100% | 36.6 MiB/s | 112.3 KiB | 00m00s
[ 74/155] pam-libs-0:1.7.0-3.fc42.aarch 100% | 26.7 MiB/s | 54.7 KiB | 00m00s
[ 75/155] debugedit-0:5.1-2.fc42.aarch6 100% | 37.3 MiB/s | 76.5 KiB | 00m00s
[ 76/155] elfutils-0:0.192-7.fc42.aarch 100% | 120.6 MiB/s | 493.8 KiB | 00m00s
[ 77/155] libzstd-0:1.5.6-2.fc41.aarch6 100% | 70.3 MiB/s | 288.0 KiB | 00m00s
[ 78/155] elfutils-libelf-0:0.192-7.fc4 100% | 22.3 MiB/s | 205.7 KiB | 00m00s
[ 79/155] pkgconf-pkg-config-0:2.3.0-1. 100% | 3.4 MiB/s | 10.5 KiB | 00m00s
[ 80/155] libarchive-0:3.7.7-1.fc42.aar 100% | 43.3 MiB/s | 399.1 KiB | 00m00s
[ 81/155] binutils-0:2.43.50-9.fc42.aar 100% | 221.1 MiB/s | 6.0 MiB | 00m00s
[ 82/155] popt-0:1.19-7.fc42.aarch64 100% | 5.7 MiB/s | 57.9 KiB | 00m00s
[ 83/155] readline-0:8.2-11.fc42.aarch6 100% | 25.3 MiB/s | 207.0 KiB | 00m00s
[ 84/155] lua-libs-0:5.4.7-1.fc42.aarch 100% | 42.2 MiB/s | 129.7 KiB | 00m00s
[ 85/155] rpm-0:4.20.0-1.fc42.aarch64 100% | 100.4 MiB/s | 514.2 KiB | 00m00s
[ 86/155] rpm-build-libs-0:4.20.0-1.fc4 100% | 18.1 MiB/s | 92.5 KiB | 00m00s
[ 87/155] rpm-libs-0:4.20.0-1.fc42.aarc 100% | 71.0 MiB/s | 290.8 KiB | 00m00s
[ 88/155] sqlite-libs-0:3.47.2-1.fc42.a 100% | 134.1 MiB/s | 686.5 KiB | 00m00s
[ 89/155] curl-0:8.11.1-2.fc42.aarch64 100% | 42.4 MiB/s | 217.3 KiB | 00m00s
[ 90/155] build-reproducibility-srpm-ma 100% | 5.7 MiB/s | 11.7 KiB | 00m00s
[ 91/155] dwz-0:0.15-8.fc42.aarch64 100% | 44.1 MiB/s | 135.4 KiB | 00m00s
[ 92/155] qt5-srpm-macros-0:5.15.15-1.f 100% | 9.2 MiB/s | 9.4 KiB | 00m00s
[ 93/155] qt6-srpm-macros-0:6.8.1-4.fc4 100% | 4.8 MiB/s | 9.8 KiB | 00m00s
[ 94/155] pkgconf-0:2.3.0-1.fc42.aarch6 100% | 21.5 MiB/s | 44.0 KiB | 00m00s
[ 95/155] libpkgconf-0:2.3.0-1.fc42.aar 100% | 36.3 MiB/s | 37.2 KiB | 00m00s
[ 96/155] bzip2-libs-0:1.0.8-19.fc42.aa 100% | 41.7 MiB/s | 42.7 KiB | 00m00s
[ 97/155] libxml2-0:2.12.8-2.fc42.aarch 100% | 160.4 MiB/s | 657.2 KiB | 00m00s
[ 98/155] lz4-libs-0:1.10.0-1.fc42.aarc 100% | 38.7 MiB/s | 79.3 KiB | 00m00s
[ 99/155] openssl-libs-1:3.2.2-8.fc42.a 100% | 230.7 MiB/s | 2.1 MiB | 00m00s
[100/155] ca-certificates-0:2024.2.69_v 100% | 184.5 MiB/s | 944.5 KiB | 00m00s
[101/155] pkgconf-m4-0:2.3.0-1.fc42.noa 100% | 530.3 KiB/s | 14.8 KiB | 00m00s
[102/155] crypto-policies-0:20241128-1. 100% | 32.0 MiB/s | 98.4 KiB | 00m00s
[103/155] libffi-0:3.4.6-3.fc42.aarch64 100% | 18.7 MiB/s | 38.3 KiB | 00m00s
[104/155] glibc-gconv-extra-0:2.40.9000 100% | 35.4 MiB/s | 1.5 MiB | 00m00s
[105/155] pcre2-0:10.44-1.fc42.1.aarch6 100% | 43.7 MiB/s | 223.9 KiB | 00m00s
[106/155] pcre2-syntax-0:10.44-1.fc42.1 100% | 29.4 MiB/s | 150.4 KiB | 00m00s
[107/155] glibc-common-0:2.40.9000-24.f 100% | 93.1 MiB/s | 381.2 KiB | 00m00s
[108/155] elfutils-debuginfod-client-0: 100% | 14.3 MiB/s | 44.0 KiB | 00m00s
[109/155] elfutils-libs-0:0.192-7.fc42. 100% | 61.6 MiB/s | 252.4 KiB | 00m00s
[110/155] coreutils-common-0:9.5-11.fc4 100% | 209.8 MiB/s | 2.1 MiB | 00m00s
[111/155] libcap-0:2.71-1.fc42.aarch64 100% | 25.5 MiB/s | 78.4 KiB | 00m00s
[112/155] add-determinism-0:0.4.3-1.fc4 100% | 127.7 MiB/s | 784.8 KiB | 00m00s
[113/155] alternatives-0:1.31-1.fc42.aa 100% | 18.8 MiB/s | 38.5 KiB | 00m00s
[114/155] jansson-0:2.14-1.fc42.aarch64 100% | 44.1 MiB/s | 45.2 KiB | 00m00s
[115/155] libcap-ng-0:0.8.5-3.fc42.aarc 100% | 15.1 MiB/s | 30.9 KiB | 00m00s
[116/155] authselect-libs-0:1.5.0-8.fc4 100% | 65.9 MiB/s | 202.3 KiB | 00m00s
[117/155] pam-0:1.7.0-3.fc42.aarch64 100% | 91.7 MiB/s | 469.6 KiB | 00m00s
[118/155] gdbm-1:1.23-7.fc41.aarch64 100% | 49.3 MiB/s | 151.6 KiB | 00m00s
[119/155] gdbm-libs-1:1.23-7.fc41.aarch 100% | 54.9 MiB/s | 56.3 KiB | 00m00s
[120/155] libtirpc-0:1.3.6-1.fc42.aarch 100% | 31.1 MiB/s | 95.4 KiB | 00m00s
[121/155] libcom_err-0:1.47.1-6.fc42.aa 100% | 26.3 MiB/s | 26.9 KiB | 00m00s
[122/155] krb5-libs-0:1.21.3-3.fc42.aar 100% | 101.5 MiB/s | 727.4 KiB | 00m00s
[123/155] libverto-0:0.3.2-9.fc41.aarch 100% | 20.5 MiB/s | 20.9 KiB | 00m00s
[124/155] mpfr-0:4.2.1-5.fc42.aarch64 100% | 78.9 MiB/s | 323.2 KiB | 00m00s
[125/155] p11-kit-0:0.25.5-4.fc42.aarch 100% | 99.1 MiB/s | 406.1 KiB | 00m00s
[126/155] p11-kit-trust-0:0.25.5-4.fc42 100% | 62.1 MiB/s | 127.1 KiB | 00m00s
[127/155] rpm-sequoia-0:1.7.0-3.fc42.aa 100% | 152.9 MiB/s | 782.7 KiB | 00m00s
[128/155] libgcc-0:15.0.0-0.2.fc42.aarc 100% | 907.2 KiB/s | 89.8 KiB | 00m00s
[129/155] authselect-0:1.5.0-8.fc42.aar 100% | 45.7 MiB/s | 140.4 KiB | 00m00s
[130/155] libnsl2-0:2.0.1-2.fc42.aarch6 100% | 14.1 MiB/s | 28.8 KiB | 00m00s
[131/155] libpwquality-0:1.4.5-11.fc42. 100% | 50.9 MiB/s | 104.3 KiB | 00m00s
[132/155] libtasn1-0:4.19.0-9.fc42.aarc 100% | 35.1 MiB/s | 71.9 KiB | 00m00s
[133/155] cracklib-0:2.9.11-6.fc42.aarc 100% | 37.8 MiB/s | 77.5 KiB | 00m00s
[134/155] keyutils-libs-0:1.6.3-4.fc42. 100% | 30.0 MiB/s | 30.8 KiB | 00m00s
[135/155] elfutils-default-yama-scope-0 100% | 12.7 MiB/s | 13.0 KiB | 00m00s
[136/155] json-c-0:0.18-1.fc42.aarch64 100% | 41.8 MiB/s | 42.8 KiB | 00m00s
[137/155] gdb-minimal-0:15.2-4.fc42.aar 100% | 218.1 MiB/s | 3.9 MiB | 00m00s
[138/155] xxhash-libs-0:0.8.2-4.fc42.aa 100% | 33.8 MiB/s | 34.6 KiB | 00m00s
[139/155] libcurl-0:8.11.1-2.fc42.aarch 100% | 116.8 MiB/s | 358.9 KiB | 00m00s
[140/155] libnghttp2-0:1.64.0-1.fc42.aa 100% | 37.5 MiB/s | 76.8 KiB | 00m00s
[141/155] fedora-release-0:42-0.11.noar 100% | 12.7 MiB/s | 13.0 KiB | 00m00s
[142/155] fedora-release-identity-basic 100% | 13.5 MiB/s | 13.8 KiB | 00m00s
[143/155] libbrotli-0:1.1.0-5.fc42.aarc 100% | 83.1 MiB/s | 340.4 KiB | 00m00s
[144/155] libidn2-0:2.3.7-2.fc42.aarch6 100% | 36.4 MiB/s | 111.7 KiB | 00m00s
[145/155] libpsl-0:0.21.5-4.fc42.aarch6 100% | 31.1 MiB/s | 63.7 KiB | 00m00s
[146/155] publicsuffix-list-dafsa-0:202 100% | 28.5 MiB/s | 58.3 KiB | 00m00s
[147/155] libssh-0:0.11.1-1.fc42.aarch6 100% | 73.4 MiB/s | 225.4 KiB | 00m00s
[148/155] openldap-0:2.6.8-6.fc42.aarch 100% | 78.4 MiB/s | 240.8 KiB | 00m00s
[149/155] cyrus-sasl-lib-0:2.1.28-27.fc 100% | 190.5 MiB/s | 780.2 KiB | 00m00s
[150/155] libevent-0:2.1.12-14.fc42.aar 100% | 59.1 MiB/s | 242.2 KiB | 00m00s
[151/155] libtool-ltdl-0:2.5.4-1.fc42.a 100% | 16.7 MiB/s | 34.3 KiB | 00m00s
[152/155] libssh-config-0:0.11.1-1.fc42 100% | 9.7 MiB/s | 9.9 KiB | 00m00s
[153/155] libunistring-0:1.1-8.fc42.aar 100% | 131.1 MiB/s | 537.0 KiB | 00m00s
[154/155] libstdc++-0:15.0.0-0.2.fc42.a 100% | 3.6 MiB/s | 760.1 KiB | 00m00s
[155/155] libgomp-0:15.0.0-0.2.fc42.aar 100% | 1.8 MiB/s | 322.1 KiB | 00m00s
--------------------------------------------------------------------------------
[155/155] Total 100% | 69.9 MiB/s | 50.0 MiB | 00m01s
Running transaction
Importing OpenPGP key 0x105EF944:
UserID : "Fedora (42) <fedora-42-primary@fedoraproject.org>"
Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944
From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary
The key was successfully imported.
Importing OpenPGP key 0x105EF944:
UserID : "Fedora (42) <fedora-42-primary@fedoraproject.org>"
Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944
From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary
The key was successfully imported.
Importing OpenPGP key 0xE99D6AD1:
UserID : "Fedora (41) <fedora-41-primary@fedoraproject.org>"
Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1
From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary
The key was successfully imported.
Importing OpenPGP key 0x31645531:
UserID : "Fedora (43) <fedora-43-primary@fedoraproject.org>"
Fingerprint: C6E7F081CF80E13146676E88829B606631645531
From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-43-primary
The key was successfully imported.
[ 1/157] Verify package files 100% | 685.0 B/s | 155.0 B | 00m00s
>>> Running pre-transaction scriptlet: filesystem-0:3.18-29.fc42.aarch64
>>> Finished pre-transaction scriptlet: filesystem-0:3.18-29.fc42.aarch64
>>> [RPM] /var/lib/mock/fedora-rawhide-aarch64-1734872166.924324/root/var/cache/
[ 2/157] Prepare transaction 100% | 2.5 KiB/s | 155.0 B | 00m00s
[ 3/157] Installing libgcc-0:15.0.0-0. 100% | 215.4 MiB/s | 220.5 KiB | 00m00s
[ 4/157] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s
[ 5/157] Installing publicsuffix-list- 100% | 66.7 MiB/s | 68.3 KiB | 00m00s
[ 6/157] Installing fedora-release-ide 100% | 0.0 B/s | 976.0 B | 00m00s
[ 7/157] Installing fedora-repos-rawhi 100% | 2.4 MiB/s | 2.4 KiB | 00m00s
[ 8/157] Installing fedora-gpg-keys-0: 100% | 33.6 MiB/s | 172.2 KiB | 00m00s
[ 9/157] Installing fedora-repos-0:42- 100% | 0.0 B/s | 5.7 KiB | 00m00s
[ 10/157] Installing fedora-release-com 100% | 23.6 MiB/s | 24.1 KiB | 00m00s
[ 11/157] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s
[ 12/157] Installing setup-0:2.15.0-5.f 100% | 44.3 MiB/s | 726.1 KiB | 00m00s
>>> [RPM] /etc/hosts created as /etc/hosts.rpmnew
[ 13/157] Installing filesystem-0:3.18- 100% | 2.6 MiB/s | 212.6 KiB | 00m00s
[ 14/157] Installing basesystem-0:11-21 100% | 0.0 B/s | 124.0 B | 00m00s
[ 15/157] Installing coreutils-common-0 100% | 310.8 MiB/s | 11.2 MiB | 00m00s
[ 16/157] Installing pcre2-syntax-0:10. 100% | 248.1 MiB/s | 254.1 KiB | 00m00s
[ 17/157] Installing pkgconf-m4-0:2.3.0 100% | 0.0 B/s | 14.8 KiB | 00m00s
[ 18/157] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s
[ 19/157] Installing qt5-srpm-macros-0: 100% | 757.8 KiB/s | 776.0 B | 00m00s
[ 20/157] Installing ncurses-base-0:6.5 100% | 49.1 MiB/s | 351.7 KiB | 00m00s
[ 21/157] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s
[ 22/157] Installing ncurses-libs-0:6.5 100% | 321.2 MiB/s | 2.2 MiB | 00m00s
[ 23/157] Installing glibc-0:2.40.9000- 100% | 273.4 MiB/s | 6.0 MiB | 00m00s
[ 24/157] Installing bash-0:5.2.37-1.fc 100% | 342.9 MiB/s | 8.2 MiB | 00m00s
[ 25/157] Installing glibc-common-0:2.4 100% | 187.2 MiB/s | 1.3 MiB | 00m00s
[ 26/157] Installing glibc-gconv-extra- 100% | 368.7 MiB/s | 18.4 MiB | 00m00s
[ 27/157] Installing zlib-ng-compat-0:2 100% | 131.5 MiB/s | 134.6 KiB | 00m00s
[ 28/157] Installing xz-libs-1:5.6.3-2. 100% | 261.2 MiB/s | 267.5 KiB | 00m00s
[ 29/157] Installing bzip2-libs-0:1.0.8 100% | 133.0 MiB/s | 136.2 KiB | 00m00s
[ 30/157] Installing libuuid-0:2.40.2-8 100% | 194.0 MiB/s | 198.6 KiB | 00m00s
[ 31/157] Installing popt-0:1.19-7.fc42 100% | 48.7 MiB/s | 149.5 KiB | 00m00s
[ 32/157] Installing readline-0:8.2-11. 100% | 271.3 MiB/s | 555.7 KiB | 00m00s
[ 33/157] Installing libblkid-0:2.40.2- 100% | 204.9 MiB/s | 419.7 KiB | 00m00s
[ 34/157] Installing gmp-1:6.3.0-2.fc41 100% | 235.8 MiB/s | 724.2 KiB | 00m00s
[ 35/157] Installing libattr-0:2.5.2-4. 100% | 192.9 MiB/s | 197.5 KiB | 00m00s
[ 36/157] Installing libacl-0:2.3.2-2.f 100% | 65.5 MiB/s | 67.1 KiB | 00m00s
[ 37/157] Installing libxcrypt-0:4.4.36 100% | 132.8 MiB/s | 272.0 KiB | 00m00s
[ 38/157] Installing libzstd-0:1.5.6-2. 100% | 259.5 MiB/s | 797.3 KiB | 00m00s
[ 39/157] Installing elfutils-libelf-0: 100% | 296.6 MiB/s | 1.2 MiB | 00m00s
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[ 41/157] Installing libeconf-0:0.7.5-1 100% | 78.5 MiB/s | 80.3 KiB | 00m00s
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[ 43/157] Installing dwz-0:0.15-8.fc42. 100% | 156.7 MiB/s | 321.0 KiB | 00m00s
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[ 46/157] Installing unzip-0:6.0-65.fc4 100% | 570.7 MiB/s | 2.3 MiB | 00m00s
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[ 49/157] Installing crypto-policies-0: 100% | 22.8 MiB/s | 163.7 KiB | 00m00s
[ 50/157] Installing libsmartcols-0:2.4 100% | 282.9 MiB/s | 289.7 KiB | 00m00s
[ 51/157] Installing libsepol-0:3.8-0.r 100% | 259.5 MiB/s | 797.2 KiB | 00m00s
[ 52/157] Installing lua-libs-0:5.4.7-1 100% | 385.0 MiB/s | 394.3 KiB | 00m00s
[ 53/157] Installing lz4-libs-0:1.10.0- 100% | 192.0 MiB/s | 196.6 KiB | 00m00s
[ 54/157] Installing libffi-0:3.4.6-3.f 100% | 277.2 MiB/s | 283.8 KiB | 00m00s
[ 55/157] Installing pcre2-0:10.44-1.fc 100% | 315.4 MiB/s | 645.9 KiB | 00m00s
[ 56/157] Installing libselinux-0:3.8-0 100% | 192.2 MiB/s | 196.8 KiB | 00m00s
[ 57/157] Installing sed-0:4.9-3.fc42.a 100% | 171.7 MiB/s | 878.9 KiB | 00m00s
[ 58/157] Installing findutils-1:4.10.0 100% | 239.2 MiB/s | 1.9 MiB | 00m00s
[ 59/157] Installing grep-0:3.11-9.fc42 100% | 171.9 MiB/s | 1.0 MiB | 00m00s
[ 60/157] Installing xz-1:5.6.3-2.fc42. 100% | 188.8 MiB/s | 1.5 MiB | 00m00s
[ 61/157] Installing libmount-0:2.40.2- 100% | 236.8 MiB/s | 485.1 KiB | 00m00s
[ 62/157] Installing alternatives-0:1.3 100% | 88.2 MiB/s | 90.3 KiB | 00m00s
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[ 64/157] Installing audit-libs-0:4.0.2 100% | 203.8 MiB/s | 417.3 KiB | 00m00s
[ 65/157] Installing pam-libs-0:1.7.0-3 100% | 108.0 MiB/s | 221.1 KiB | 00m00s
[ 66/157] Installing libcap-0:2.71-1.fc 100% | 163.9 MiB/s | 503.5 KiB | 00m00s
[ 67/157] Installing systemd-libs-0:257 100% | 302.8 MiB/s | 2.4 MiB | 00m00s
[ 68/157] Installing libcom_err-0:1.47. 100% | 234.8 MiB/s | 240.4 KiB | 00m00s
[ 69/157] Installing libtasn1-0:4.19.0- 100% | 214.4 MiB/s | 219.5 KiB | 00m00s
[ 70/157] Installing p11-kit-0:0.25.5-4 100% | 212.7 MiB/s | 2.3 MiB | 00m00s
[ 71/157] Installing libunistring-0:1.1 100% | 290.3 MiB/s | 1.7 MiB | 00m00s
[ 72/157] Installing libidn2-0:2.3.7-2. 100% | 108.6 MiB/s | 333.6 KiB | 00m00s
[ 73/157] Installing libpsl-0:0.21.5-4. 100% | 129.2 MiB/s | 132.3 KiB | 00m00s
[ 74/157] Installing p11-kit-trust-0:0. 100% | 49.7 MiB/s | 458.4 KiB | 00m00s
[ 75/157] Installing openssl-libs-1:3.2 100% | 272.1 MiB/s | 6.3 MiB | 00m00s
[ 76/157] Installing coreutils-0:9.5-11 100% | 255.9 MiB/s | 7.9 MiB | 00m00s
[ 77/157] Installing ca-certificates-0: 100% | 1.5 MiB/s | 2.4 MiB | 00m02s
[ 78/157] Installing gzip-0:1.13-2.fc42 100% | 104.6 MiB/s | 428.3 KiB | 00m00s
[ 79/157] Installing authselect-libs-0: 100% | 122.8 MiB/s | 880.5 KiB | 00m00s
[ 80/157] Installing cracklib-0:2.9.11- 100% | 83.8 MiB/s | 429.0 KiB | 00m00s
[ 81/157] Installing libpwquality-0:1.4 100% | 100.4 MiB/s | 617.1 KiB | 00m00s
[ 82/157] Installing rpm-sequoia-0:1.7. 100% | 277.8 MiB/s | 2.2 MiB | 00m00s
[ 83/157] Installing libevent-0:2.1.12- 100% | 267.3 MiB/s | 1.1 MiB | 00m00s
[ 84/157] Installing util-linux-core-0: 100% | 387.7 MiB/s | 6.2 MiB | 00m00s
[ 85/157] Installing libsemanage-0:3.8- 100% | 115.6 MiB/s | 355.0 KiB | 00m00s
[ 86/157] Installing shadow-utils-2:4.1 100% | 175.5 MiB/s | 4.6 MiB | 00m00s
[ 87/157] Installing tar-2:1.35-4.fc41. 100% | 278.8 MiB/s | 3.1 MiB | 00m00s
[ 88/157] Installing zstd-0:1.5.6-2.fc4 100% | 338.2 MiB/s | 1.7 MiB | 00m00s
[ 89/157] Installing zip-0:3.0-42.fc42. 100% | 185.4 MiB/s | 759.6 KiB | 00m00s
[ 90/157] Installing gdbm-1:1.23-7.fc41 100% | 227.9 MiB/s | 933.4 KiB | 00m00s
[ 91/157] Installing cyrus-sasl-lib-0:2 100% | 345.2 MiB/s | 3.1 MiB | 00m00s
[ 92/157] Installing libfdisk-0:2.40.2- 100% | 236.3 MiB/s | 483.9 KiB | 00m00s
[ 93/157] Installing bzip2-0:1.0.8-19.f 100% | 84.6 MiB/s | 173.2 KiB | 00m00s
[ 94/157] Installing libxml2-0:2.12.8-2 100% | 265.9 MiB/s | 1.9 MiB | 00m00s
[ 95/157] Installing libarchive-0:3.7.7 100% | 220.0 MiB/s | 901.2 KiB | 00m00s
[ 96/157] Installing sqlite-libs-0:3.47 100% | 283.0 MiB/s | 1.4 MiB | 00m00s
[ 97/157] Installing rpm-libs-0:4.20.0- 100% | 234.3 MiB/s | 719.6 KiB | 00m00s
[ 98/157] Installing add-determinism-0: 100% | 292.0 MiB/s | 2.0 MiB | 00m00s
[ 99/157] Installing build-reproducibil 100% | 0.0 B/s | 1.0 KiB | 00m00s
[100/157] Installing ed-0:1.20.2-2.fc41 100% | 278.5 MiB/s | 285.1 KiB | 00m00s
[101/157] Installing patch-0:2.7.6-25.f 100% | 127.2 MiB/s | 260.5 KiB | 00m00s
[102/157] Installing filesystem-srpm-ma 100% | 0.0 B/s | 36.8 KiB | 00m00s
[103/157] Installing elfutils-default-y 100% | 340.5 KiB/s | 2.0 KiB | 00m00s
[104/157] Installing elfutils-libs-0:0. 100% | 179.8 MiB/s | 736.6 KiB | 00m00s
[105/157] Installing cpio-0:2.15-2.fc41 100% | 203.4 MiB/s | 1.2 MiB | 00m00s
[106/157] Installing diffutils-0:3.10-8 100% | 208.0 MiB/s | 1.7 MiB | 00m00s
[107/157] Installing libpkgconf-0:2.3.0 100% | 130.0 MiB/s | 133.1 KiB | 00m00s
[108/157] Installing pkgconf-0:2.3.0-1. 100% | 110.9 MiB/s | 113.6 KiB | 00m00s
[109/157] Installing pkgconf-pkg-config 100% | 0.0 B/s | 1.8 KiB | 00m00s
[110/157] Installing jansson-0:2.14-1.f 100% | 90.0 MiB/s | 92.2 KiB | 00m00s
[111/157] Installing libverto-0:0.3.2-9 100% | 194.7 MiB/s | 199.3 KiB | 00m00s
[112/157] Installing libgomp-0:15.0.0-0 100% | 245.3 MiB/s | 502.4 KiB | 00m00s
[113/157] Installing rpm-build-libs-0:4 100% | 192.2 MiB/s | 196.8 KiB | 00m00s
[114/157] Installing keyutils-libs-0:1. 100% | 95.9 MiB/s | 98.2 KiB | 00m00s
[115/157] Installing krb5-libs-0:1.21.3 100% | 249.7 MiB/s | 2.5 MiB | 00m00s
[116/157] Installing libtirpc-0:1.3.6-1 100% | 209.7 MiB/s | 214.7 KiB | 00m00s
[117/157] Installing libnsl2-0:2.0.1-2. 100% | 91.2 MiB/s | 93.4 KiB | 00m00s
[118/157] Installing pam-0:1.7.0-3.fc42 100% | 201.7 MiB/s | 4.2 MiB | 00m00s
[119/157] Installing libssh-0:0.11.1-1. 100% | 188.1 MiB/s | 577.8 KiB | 00m00s
[120/157] Installing json-c-0:0.18-1.fc 100% | 133.7 MiB/s | 137.0 KiB | 00m00s
[121/157] Installing xxhash-libs-0:0.8. 100% | 208.7 MiB/s | 213.7 KiB | 00m00s
[122/157] Installing libnghttp2-0:1.64. 100% | 257.1 MiB/s | 263.3 KiB | 00m00s
[123/157] Installing libbrotli-0:1.1.0- 100% | 221.3 MiB/s | 906.6 KiB | 00m00s
[124/157] Installing libtool-ltdl-0:2.5 100% | 91.0 MiB/s | 93.2 KiB | 00m00s
[125/157] Installing openldap-0:2.6.8-6 100% | 244.4 MiB/s | 750.8 KiB | 00m00s
[126/157] Installing libcurl-0:8.11.1-2 100% | 275.5 MiB/s | 846.3 KiB | 00m00s
[127/157] Installing elfutils-debuginfo 100% | 70.1 MiB/s | 143.6 KiB | 00m00s
[128/157] Installing binutils-0:2.43.50 100% | 336.0 MiB/s | 28.9 MiB | 00m00s
[129/157] Installing elfutils-0:0.192-7 100% | 275.8 MiB/s | 3.0 MiB | 00m00s
[130/157] Installing gdb-minimal-0:15.2 100% | 323.2 MiB/s | 12.6 MiB | 00m00s
[131/157] Installing debugedit-0:5.1-2. 100% | 119.2 MiB/s | 244.2 KiB | 00m00s
[132/157] Installing curl-0:8.11.1-2.fc 100% | 40.3 MiB/s | 454.4 KiB | 00m00s
[133/157] Installing rpm-0:4.20.0-1.fc4 100% | 123.9 MiB/s | 2.7 MiB | 00m00s
[134/157] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.2 KiB | 00m00s
[135/157] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s
[136/157] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s
[137/157] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s
[138/157] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s
[139/157] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s
[140/157] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s
[141/157] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s
[142/157] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s
[143/157] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s
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[145/157] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s
[146/157] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s
[147/157] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s
[148/157] Installing forge-srpm-macros- 100% | 39.3 MiB/s | 40.3 KiB | 00m00s
[149/157] Installing go-srpm-macros-0:3 100% | 60.5 MiB/s | 62.0 KiB | 00m00s
[150/157] Installing python-srpm-macros 100% | 50.9 MiB/s | 52.2 KiB | 00m00s
[151/157] Installing redhat-rpm-config- 100% | 62.9 MiB/s | 193.2 KiB | 00m00s
[152/157] Installing rpm-build-0:4.20.0 100% | 171.0 MiB/s | 525.4 KiB | 00m00s
[153/157] Installing pyproject-srpm-mac 100% | 1.2 MiB/s | 2.5 KiB | 00m00s
[154/157] Installing util-linux-0:2.40. 100% | 353.2 MiB/s | 17.0 MiB | 00m00s
[155/157] Installing authselect-0:1.5.0 100% | 60.0 MiB/s | 184.3 KiB | 00m00s
[156/157] Installing which-0:2.21-42.fc 100% | 122.2 MiB/s | 250.4 KiB | 00m00s
[157/157] Installing info-0:7.1.1-2.fc4 100% | 293.7 KiB/s | 614.0 KiB | 00m02s
Warning: skipped OpenPGP checks for 80 packages from repositories: copr_base, https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch
Complete!
Finish: installing minimal buildroot with dnf5
Start: creating root cache
Finish: creating root cache
Finish: chroot init
INFO: Installed packages:
INFO: add-determinism-0.4.3-1.fc42.aarch64
alternatives-1.31-1.fc42.aarch64
ansible-srpm-macros-1-16.fc41.noarch
audit-libs-4.0.2-1.fc42.aarch64
authselect-1.5.0-8.fc42.aarch64
authselect-libs-1.5.0-8.fc42.aarch64
basesystem-11-21.fc41.noarch
bash-5.2.37-1.fc42.aarch64
binutils-2.43.50-9.fc42.aarch64
build-reproducibility-srpm-macros-0.4.3-1.fc42.noarch
bzip2-1.0.8-19.fc42.aarch64
bzip2-libs-1.0.8-19.fc42.aarch64
ca-certificates-2024.2.69_v8.0.401-3.fc42.noarch
coreutils-9.5-11.fc42.aarch64
coreutils-common-9.5-11.fc42.aarch64
cpio-2.15-2.fc41.aarch64
cracklib-2.9.11-6.fc42.aarch64
crypto-policies-20241128-1.gitbb7b0b0.fc42.noarch
curl-8.11.1-2.fc42.aarch64
cyrus-sasl-lib-2.1.28-27.fc41.aarch64
debugedit-5.1-2.fc42.aarch64
diffutils-3.10-8.fc42.aarch64
dwz-0.15-8.fc42.aarch64
ed-1.20.2-2.fc41.aarch64
efi-srpm-macros-5-13.fc42.noarch
elfutils-0.192-7.fc42.aarch64
elfutils-debuginfod-client-0.192-7.fc42.aarch64
elfutils-default-yama-scope-0.192-7.fc42.noarch
elfutils-libelf-0.192-7.fc42.aarch64
elfutils-libs-0.192-7.fc42.aarch64
fedora-gpg-keys-42-0.3.noarch
fedora-release-42-0.11.noarch
fedora-release-common-42-0.11.noarch
fedora-release-identity-basic-42-0.11.noarch
fedora-repos-42-0.3.noarch
fedora-repos-rawhide-42-0.3.noarch
file-5.45-8.fc42.aarch64
file-libs-5.45-8.fc42.aarch64
filesystem-3.18-29.fc42.aarch64
filesystem-srpm-macros-3.18-29.fc42.noarch
findutils-4.10.0-4.fc42.aarch64
fonts-srpm-macros-2.0.5-17.fc41.noarch
forge-srpm-macros-0.4.0-1.fc42.noarch
fpc-srpm-macros-1.3-13.fc41.noarch
gawk-5.3.0-4.fc41.aarch64
gdb-minimal-15.2-4.fc42.aarch64
gdbm-1.23-7.fc41.aarch64
gdbm-libs-1.23-7.fc41.aarch64
ghc-srpm-macros-1.9.2-1.fc42.noarch
glibc-2.40.9000-24.fc42.aarch64
glibc-common-2.40.9000-24.fc42.aarch64
glibc-gconv-extra-2.40.9000-24.fc42.aarch64
glibc-minimal-langpack-2.40.9000-24.fc42.aarch64
gmp-6.3.0-2.fc41.aarch64
gnat-srpm-macros-6-6.fc41.noarch
go-srpm-macros-3.6.0-5.fc42.noarch
gpg-pubkey-105ef944-65ca83d1
gpg-pubkey-31645531-66b6dccf
gpg-pubkey-e99d6ad1-64d2612c
grep-3.11-9.fc42.aarch64
gzip-1.13-2.fc42.aarch64
info-7.1.1-2.fc42.aarch64
jansson-2.14-1.fc42.aarch64
json-c-0.18-1.fc42.aarch64
kernel-srpm-macros-1.0-24.fc41.noarch
keyutils-libs-1.6.3-4.fc42.aarch64
krb5-libs-1.21.3-3.fc42.aarch64
libacl-2.3.2-2.fc42.aarch64
libarchive-3.7.7-1.fc42.aarch64
libattr-2.5.2-4.fc41.aarch64
libblkid-2.40.2-8.fc42.aarch64
libbrotli-1.1.0-5.fc42.aarch64
libcap-2.71-1.fc42.aarch64
libcap-ng-0.8.5-3.fc42.aarch64
libcom_err-1.47.1-6.fc42.aarch64
libcurl-8.11.1-2.fc42.aarch64
libeconf-0.7.5-1.fc42.aarch64
libevent-2.1.12-14.fc42.aarch64
libfdisk-2.40.2-8.fc42.aarch64
libffi-3.4.6-3.fc42.aarch64
libgcc-15.0.0-0.2.fc42.aarch64
libgomp-15.0.0-0.2.fc42.aarch64
libidn2-2.3.7-2.fc42.aarch64
libmount-2.40.2-8.fc42.aarch64
libnghttp2-1.64.0-1.fc42.aarch64
libnsl2-2.0.1-2.fc42.aarch64
libpkgconf-2.3.0-1.fc42.aarch64
libpsl-0.21.5-4.fc42.aarch64
libpwquality-1.4.5-11.fc42.aarch64
libselinux-3.8-0.rc3.1.fc42.aarch64
libsemanage-3.8-0.rc3.1.fc42.aarch64
libsepol-3.8-0.rc3.1.fc42.aarch64
libsmartcols-2.40.2-8.fc42.aarch64
libssh-0.11.1-1.fc42.aarch64
libssh-config-0.11.1-1.fc42.noarch
libstdc++-15.0.0-0.2.fc42.aarch64
libtasn1-4.19.0-9.fc42.aarch64
libtirpc-1.3.6-1.fc42.aarch64
libtool-ltdl-2.5.4-1.fc42.aarch64
libunistring-1.1-8.fc42.aarch64
libuuid-2.40.2-8.fc42.aarch64
libverto-0.3.2-9.fc41.aarch64
libxcrypt-4.4.36-12.fc42.aarch64
libxml2-2.12.8-2.fc42.aarch64
libzstd-1.5.6-2.fc41.aarch64
lua-libs-5.4.7-1.fc42.aarch64
lua-srpm-macros-1-14.fc41.noarch
lz4-libs-1.10.0-1.fc42.aarch64
mpfr-4.2.1-5.fc42.aarch64
ncurses-base-6.5-2.20240629.fc41.noarch
ncurses-libs-6.5-2.20240629.fc41.aarch64
ocaml-srpm-macros-10-3.fc41.noarch
openblas-srpm-macros-2-18.fc41.noarch
openldap-2.6.8-6.fc42.aarch64
openssl-libs-3.2.2-8.fc42.aarch64
p11-kit-0.25.5-4.fc42.aarch64
p11-kit-trust-0.25.5-4.fc42.aarch64
package-notes-srpm-macros-0.5-12.fc41.noarch
pam-1.7.0-3.fc42.aarch64
pam-libs-1.7.0-3.fc42.aarch64
patch-2.7.6-25.fc42.aarch64
pcre2-10.44-1.fc42.1.aarch64
pcre2-syntax-10.44-1.fc42.1.noarch
perl-srpm-macros-1-56.fc41.noarch
pkgconf-2.3.0-1.fc42.aarch64
pkgconf-m4-2.3.0-1.fc42.noarch
pkgconf-pkg-config-2.3.0-1.fc42.aarch64
popt-1.19-7.fc42.aarch64
publicsuffix-list-dafsa-20240107-4.fc41.noarch
pyproject-srpm-macros-1.16.3-1.fc42.noarch
python-srpm-macros-3.13-3.fc41.noarch
qt5-srpm-macros-5.15.15-1.fc42.noarch
qt6-srpm-macros-6.8.1-4.fc42.noarch
readline-8.2-11.fc42.aarch64
redhat-rpm-config-300-1.no_annobin.0.fc42.noarch
rpm-4.20.0-1.fc42.aarch64
rpm-build-4.20.0-1.fc42.aarch64
rpm-build-libs-4.20.0-1.fc42.aarch64
rpm-libs-4.20.0-1.fc42.aarch64
rpm-sequoia-1.7.0-3.fc42.aarch64
rust-srpm-macros-26.3-3.fc42.noarch
sed-4.9-3.fc42.aarch64
setup-2.15.0-5.fc41.noarch
shadow-utils-4.17.0~rc1-1.fc42.aarch64
sqlite-libs-3.47.2-1.fc42.aarch64
systemd-libs-257.1-1.fc42.aarch64
tar-1.35-4.fc41.aarch64
unzip-6.0-65.fc42.aarch64
util-linux-2.40.2-8.fc42.aarch64
util-linux-core-2.40.2-8.fc42.aarch64
which-2.21-42.fc41.aarch64
xxhash-libs-0.8.2-4.fc42.aarch64
xz-5.6.3-2.fc42.aarch64
xz-libs-5.6.3-2.fc42.aarch64
zig-srpm-macros-1-3.fc41.noarch
zip-3.0-42.fc42.aarch64
zlib-ng-compat-2.2.2-1.fc42.aarch64
zstd-1.5.6-2.fc41.aarch64
Start: buildsrpm
Start: rpmbuild -bs
Building target platforms: aarch64
Building for target aarch64
setting SOURCE_DATE_EPOCH=1721433600
Wrote: /builddir/build/SRPMS/smoldyn-2.72-5.fc42.src.rpm
Finish: rpmbuild -bs
INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-aarch64-1734872166.924324/root/var/log/dnf5.log
INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz
/bin/tar: Removing leading `/' from member names
Finish: buildsrpm
INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-k_l85nn6/smoldyn/smoldyn.spec) Config(child) 0 minutes 23 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
INFO: Start(/var/lib/copr-rpmbuild/results/smoldyn-2.72-5.fc42.src.rpm) Config(fedora-rawhide-aarch64)
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1734872166.924324/root.
INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1734872166.924324/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1734872166.924324/root.
INFO: calling preinit hooks
INFO: enabled root cache
Start: unpacking root cache
Finish: unpacking root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Buildroot is handled by package management downloaded with a bootstrap image:
rpm-4.20.0-1.fc42.aarch64
rpm-sequoia-1.7.0-3.fc42.aarch64
dnf5-5.2.8.1-2.fc42.aarch64
dnf5-plugins-5.2.8.1-2.fc42.aarch64
Finish: chroot init
Start: build phase for smoldyn-2.72-5.fc42.src.rpm
Start: build setup for smoldyn-2.72-5.fc42.src.rpm
Building target platforms: aarch64
Building for target aarch64
setting SOURCE_DATE_EPOCH=1721433600
Wrote: /builddir/build/SRPMS/smoldyn-2.72-5.fc42.src.rpm
Updating and loading repositories:
fedora 100% | 40.3 KiB/s | 11.4 KiB | 00m00s
Copr repository 100% | 59.1 KiB/s | 1.5 KiB | 00m00s
Additional repo https_fedorapeople_org 100% | 20.9 KiB/s | 1.5 KiB | 00m00s
Repositories loaded.
Package Arch Version Repository Size
Installing:
boost-devel aarch64 1.83.0-9.fc42 fedora 143.0 MiB
cmake aarch64 3.31.2-1.fc42 copr_base 28.9 MiB
freeglut-devel aarch64 3.6.0-2.fc41 fedora 2.3 MiB
gcc aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 97.8 MiB
gcc-c++ aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 38.5 MiB
libXi-devel aarch64 1.8.2-1.fc42 fedora 132.5 KiB
libXmu-devel aarch64 1.2.1-2.fc41 fedora 66.2 KiB
libglvnd-devel aarch64 1:1.7.0-5.fc42 copr_base 2.1 MiB
libtiff-devel aarch64 4.7.0-2.fc42 copr_base 761.6 KiB
make aarch64 1:4.4.1-9.fc42 copr_base 1.8 MiB
perl-macros noarch 4:5.40.0-512.fc42 copr_base 5.5 KiB
pybind11-devel aarch64 2.13.6-1.fc42 copr_base 847.8 KiB
python3-devel aarch64 3.13.1-2.fc42 copr_base 1.8 MiB
python3-flaky noarch 3.8.1-3.fc41 fedora 129.4 KiB
python3-matplotlib aarch64 3.9.4-2.fc42 fedora 21.0 MiB
python3-setuptools noarch 74.1.3-4.fc42 copr_base 8.4 MiB
python3-wheel noarch 1:0.45.1-1.fc42 copr_base 541.9 KiB
xorg-x11-server-Xvfb aarch64 21.1.15-1.fc42 fedora 1.8 MiB
zlib-ng-compat-devel aarch64 2.2.2-1.fc42 fedora 106.8 KiB
Installing dependencies:
abattis-cantarell-vf-fonts noarch 0.301-13.fc41 fedora 192.7 KiB
annobin-docs noarch 12.79-1.fc42 copr_base 98.6 KiB
annobin-plugin-gcc aarch64 12.79-1.fc42 copr_base 997.2 KiB
boost aarch64 1.83.0-9.fc42 fedora 1.3 KiB
boost-atomic aarch64 1.83.0-9.fc42 fedora 67.6 KiB
boost-chrono aarch64 1.83.0-9.fc42 fedora 67.7 KiB
boost-container aarch64 1.83.0-9.fc42 fedora 67.7 KiB
boost-context aarch64 1.83.0-9.fc42 fedora 67.4 KiB
boost-contract aarch64 1.83.0-9.fc42 fedora 131.8 KiB
boost-coroutine aarch64 1.83.0-9.fc42 fedora 67.7 KiB
boost-date-time aarch64 1.83.0-9.fc42 fedora 67.3 KiB
boost-fiber aarch64 1.83.0-9.fc42 fedora 131.8 KiB
boost-filesystem aarch64 1.83.0-9.fc42 fedora 132.0 KiB
boost-graph aarch64 1.83.0-9.fc42 fedora 324.2 KiB
boost-iostreams aarch64 1.83.0-9.fc42 fedora 131.7 KiB
boost-json aarch64 1.83.0-9.fc42 fedora 324.0 KiB
boost-locale aarch64 1.83.0-9.fc42 fedora 580.4 KiB
boost-log aarch64 1.83.0-9.fc42 fedora 1.4 MiB
boost-math aarch64 1.83.0-9.fc42 fedora 847.2 KiB
boost-nowide aarch64 1.83.0-9.fc42 fedora 67.7 KiB
boost-numpy3 aarch64 1.83.0-9.fc42 fedora 67.7 KiB
boost-program-options aarch64 1.83.0-9.fc42 fedora 259.7 KiB
boost-python3 aarch64 1.83.0-9.fc42 fedora 263.1 KiB
boost-random aarch64 1.83.0-9.fc42 fedora 67.7 KiB
boost-regex aarch64 1.83.0-9.fc42 fedora 259.7 KiB
boost-serialization aarch64 1.83.0-9.fc42 fedora 454.1 KiB
boost-stacktrace aarch64 1.83.0-9.fc42 fedora 200.0 KiB
boost-system aarch64 1.83.0-9.fc42 fedora 67.3 KiB
boost-test aarch64 1.83.0-9.fc42 fedora 646.6 KiB
boost-thread aarch64 1.83.0-9.fc42 fedora 131.8 KiB
boost-timer aarch64 1.83.0-9.fc42 fedora 67.7 KiB
boost-type_erasure aarch64 1.83.0-9.fc42 fedora 67.7 KiB
boost-wave aarch64 1.83.0-9.fc42 fedora 644.4 KiB
cairo aarch64 1.18.2-2.fc42 copr_base 1.8 MiB
cmake-data noarch 3.31.2-1.fc42 copr_base 8.5 MiB
cmake-filesystem aarch64 3.31.2-1.fc42 copr_base 0.0 B
cmake-rpm-macros noarch 3.31.2-1.fc42 copr_base 7.5 KiB
cpp aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 35.3 MiB
default-fonts-core-sans noarch 4.2-2.fc42 fedora 11.9 KiB
dejavu-sans-fonts noarch 2.37-24.fc41 fedora 5.5 MiB
emacs-filesystem noarch 1:30.0-3.fc41 fedora 0.0 B
expat aarch64 2.6.4-1.fc42 copr_base 343.6 KiB
flexiblas aarch64 3.4.4-3.fc42 copr_base 48.5 KiB
flexiblas-netlib aarch64 3.4.4-3.fc42 copr_base 9.1 MiB
flexiblas-openblas-openmp aarch64 3.4.4-3.fc42 copr_base 66.3 KiB
fontconfig aarch64 2.15.0-8.fc41 fedora 2.4 MiB
fonts-filesystem noarch 1:2.0.5-17.fc41 fedora 0.0 B
freeglut aarch64 3.6.0-2.fc41 fedora 523.5 KiB
freetype aarch64 2.13.3-1.fc42 copr_base 799.7 KiB
fribidi aarch64 1.0.16-1.fc42 copr_base 243.7 KiB
gcc-plugin-annobin aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 67.5 KiB
glib2 aarch64 2.83.0-3.fc42 copr_base 15.3 MiB
glibc-devel aarch64 2.40.9000-24.fc42 copr_base 2.2 MiB
gnutls aarch64 3.8.8-1.fc42 copr_base 3.3 MiB
google-noto-fonts-common noarch 20240901-1.fc42 fedora 17.5 KiB
google-noto-sans-vf-fonts noarch 20240901-1.fc42 fedora 1.2 MiB
graphite2 aarch64 1.3.14-16.fc41 fedora 495.9 KiB
groff-base aarch64 1.23.0-7.fc42 copr_base 4.1 MiB
harfbuzz aarch64 10.1.0-2.fc42 copr_base 2.5 MiB
hwdata noarch 0.390-1.fc42 fedora 9.3 MiB
jbigkit-libs aarch64 2.1-30.fc42 copr_base 178.8 KiB
jsoncpp aarch64 1.9.5-8.fc42 copr_base 268.8 KiB
kernel-headers aarch64 6.13.0-0.rc3.29.fc42 fedora 6.4 MiB
lcms2 aarch64 2.16-4.fc42 copr_base 476.1 KiB
libICE aarch64 1.1.2-1.fc42 fedora 220.0 KiB
libICE-devel aarch64 1.1.2-1.fc42 fedora 261.8 KiB
libSM aarch64 1.2.5-1.fc42 fedora 127.5 KiB
libSM-devel aarch64 1.2.5-1.fc42 fedora 18.8 KiB
libX11 aarch64 1.8.10-2.fc42 fedora 1.3 MiB
libX11-common noarch 1.8.10-2.fc42 fedora 1.1 MiB
libX11-devel aarch64 1.8.10-2.fc42 fedora 1.0 MiB
libX11-xcb aarch64 1.8.10-2.fc42 fedora 195.1 KiB
libXau aarch64 1.0.12-1.fc42 fedora 119.8 KiB
libXau-devel aarch64 1.0.12-1.fc42 fedora 7.5 KiB
libXdmcp aarch64 1.1.5-2.fc41 fedora 250.4 KiB
libXext aarch64 1.3.6-2.fc41 fedora 210.0 KiB
libXext-devel aarch64 1.3.6-2.fc41 fedora 98.9 KiB
libXfixes aarch64 6.0.1-4.fc41 fedora 198.4 KiB
libXfixes-devel aarch64 6.0.1-4.fc41 fedora 9.2 KiB
libXfont2 aarch64 2.0.7-1.fc41 fedora 422.6 KiB
libXft aarch64 2.3.8-7.fc41 fedora 256.5 KiB
libXi aarch64 1.8.2-1.fc42 fedora 200.7 KiB
libXmu aarch64 1.2.1-2.fc41 fedora 455.6 KiB
libXrender aarch64 0.9.12-1.fc42 fedora 68.7 KiB
libXt aarch64 1.3.1-1.fc42 fedora 480.5 KiB
libXt-devel aarch64 1.3.1-1.fc42 fedora 1.6 MiB
libXxf86vm aarch64 1.1.6-1.fc42 fedora 68.2 KiB
libasan aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 1.5 MiB
libatomic aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 66.1 KiB
libb2 aarch64 0.98.1-12.fc42 copr_base 72.8 KiB
libdrm aarch64 2.4.124-1.fc42 copr_base 744.4 KiB
libdrm-devel aarch64 2.4.124-1.fc42 copr_base 755.9 KiB
libedit aarch64 3.1-53.20240808cvs.fc42 copr_base 275.2 KiB
libfontenc aarch64 1.1.8-2.fc42 copr_base 105.3 KiB
libgfortran aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 1.7 MiB
libglvnd aarch64 1:1.7.0-5.fc42 copr_base 1.3 MiB
libglvnd-core-devel aarch64 1:1.7.0-5.fc42 copr_base 40.3 KiB
libglvnd-egl aarch64 1:1.7.0-5.fc42 copr_base 66.3 KiB
libglvnd-gles aarch64 1:1.7.0-5.fc42 copr_base 388.7 KiB
libglvnd-glx aarch64 1:1.7.0-5.fc42 copr_base 1.0 MiB
libglvnd-opengl aarch64 1:1.7.0-5.fc42 copr_base 322.3 KiB
libicu aarch64 76.1-1.fc42 copr_base 36.5 MiB
libicu-devel aarch64 76.1-1.fc42 copr_base 5.1 MiB
libimagequant aarch64 4.0.3-5.fc42 copr_base 643.0 KiB
libjpeg-turbo aarch64 3.0.4-1.fc42 copr_base 724.7 KiB
libjpeg-turbo-devel aarch64 3.0.4-1.fc42 copr_base 353.3 KiB
liblerc aarch64 4.0.0-7.fc42 copr_base 541.9 KiB
liblerc-devel aarch64 4.0.0-7.fc42 copr_base 4.3 MiB
libmpc aarch64 1.3.1-6.fc42 copr_base 149.9 KiB
libpciaccess aarch64 0.16-13.fc41 fedora 200.7 KiB
libpciaccess-devel aarch64 0.16-13.fc41 fedora 15.3 KiB
libpng aarch64 2:1.6.44-1.fc42 copr_base 264.5 KiB
libqhull_r aarch64 1:8.0.2-5.fc42 copr_base 450.4 KiB
libraqm aarch64 0.10.1-1.fc42 copr_base 67.4 KiB
libstdc++-devel aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 15.4 MiB
libtiff aarch64 4.7.0-2.fc42 copr_base 648.4 KiB
libubsan aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 460.6 KiB
libunwind aarch64 1.8.0-5.fc42 fedora 549.0 KiB
libuuid-devel aarch64 2.40.2-8.fc42 fedora 40.9 KiB
libuv aarch64 1:1.49.2-1.fc42 copr_base 595.3 KiB
libwayland-client aarch64 1.23.0-2.fc41 fedora 198.2 KiB
libwayland-server aarch64 1.23.0-2.fc41 fedora 198.7 KiB
libwebp aarch64 1.5.0-1.fc42 fedora 802.2 KiB
libwebp-devel aarch64 1.5.0-1.fc42 fedora 121.2 KiB
libxcb aarch64 1.17.0-3.fc42 fedora 5.0 MiB
libxcb-devel aarch64 1.17.0-3.fc42 fedora 2.7 MiB
libxcrypt-devel aarch64 4.4.36-12.fc42 fedora 30.5 KiB
libxkbfile aarch64 1.1.3-2.fc42 copr_base 239.2 KiB
libxshmfence aarch64 1.3.2-5.fc42 fedora 68.8 KiB
libzstd-devel aarch64 1.5.6-2.fc41 fedora 202.4 KiB
llvm-libs aarch64 19.1.5-1.fc42 copr_base 113.4 MiB
lm_sensors-libs aarch64 3.6.0-20.fc42 copr_base 92.2 KiB
mesa-dri-drivers aarch64 24.3.1-1.fc42 copr_base 103.5 MiB
mesa-filesystem aarch64 24.3.1-1.fc42 copr_base 3.6 KiB
mesa-libEGL aarch64 24.3.1-1.fc42 copr_base 387.7 KiB
mesa-libGL aarch64 24.3.1-1.fc42 copr_base 579.0 KiB
mesa-libGL-devel aarch64 24.3.1-1.fc42 copr_base 80.9 KiB
mesa-libGLU aarch64 9.0.3-5.fc42 copr_base 322.4 KiB
mesa-libGLU-devel aarch64 9.0.3-5.fc42 copr_base 17.0 KiB
mesa-libgbm aarch64 24.3.1-1.fc42 copr_base 132.7 KiB
mesa-libglapi aarch64 24.3.1-1.fc42 copr_base 322.3 KiB
mpdecimal aarch64 2.5.1-16.fc42 copr_base 259.9 KiB
ncurses aarch64 6.5-2.20240629.fc41 fedora 1.7 MiB
nettle aarch64 3.10-3.fc42 copr_base 817.4 KiB
openblas aarch64 0.3.28-2.fc42 copr_base 106.6 KiB
openblas-openmp aarch64 0.3.28-2.fc42 copr_base 20.3 MiB
openjpeg aarch64 2.5.2-4.fc42 copr_base 405.0 KiB
perl-AutoLoader noarch 5.74-512.fc42 copr_base 20.5 KiB
perl-B aarch64 1.89-512.fc42 copr_base 540.0 KiB
perl-Carp noarch 1.54-511.fc41 fedora 46.6 KiB
perl-Class-Struct noarch 0.68-512.fc42 copr_base 25.4 KiB
perl-Data-Dumper aarch64 2.189-512.fc42 copr_base 134.6 KiB
perl-Digest noarch 1.20-511.fc41 fedora 35.3 KiB
perl-Digest-MD5 aarch64 2.59-5.fc42 copr_base 102.6 KiB
perl-DynaLoader aarch64 1.56-512.fc42 copr_base 32.1 KiB
perl-Encode aarch64 4:3.21-511.fc42 copr_base 4.8 MiB
perl-Errno aarch64 1.38-512.fc42 copr_base 8.4 KiB
perl-Exporter noarch 5.78-511.fc41 fedora 54.3 KiB
perl-Fcntl aarch64 1.18-512.fc42 copr_base 92.0 KiB
perl-File-Basename noarch 2.86-512.fc42 copr_base 14.0 KiB
perl-File-Path noarch 2.18-511.fc41 fedora 63.5 KiB
perl-File-Temp noarch 1:0.231.100-511.fc41 fedora 162.3 KiB
perl-File-stat noarch 1.14-512.fc42 copr_base 12.5 KiB
perl-FileHandle noarch 2.05-512.fc42 copr_base 9.3 KiB
perl-Getopt-Long noarch 1:2.58-2.fc41 fedora 144.5 KiB
perl-Getopt-Std noarch 1.14-512.fc42 copr_base 11.2 KiB
perl-HTTP-Tiny noarch 0.090-1.fc42 fedora 154.4 KiB
perl-IO aarch64 1.55-512.fc42 copr_base 189.9 KiB
perl-IO-Socket-IP noarch 0.43-1.fc42 fedora 100.3 KiB
perl-IO-Socket-SSL noarch 2.089-1.fc42 fedora 703.3 KiB
perl-IPC-Open3 noarch 1.22-512.fc42 copr_base 22.5 KiB
perl-MIME-Base32 noarch 1.303-21.fc41 fedora 30.7 KiB
perl-MIME-Base64 aarch64 3.16-511.fc42 copr_base 93.1 KiB
perl-Net-SSLeay aarch64 1.94-7.fc42 copr_base 1.4 MiB
perl-POSIX aarch64 2.20-512.fc42 copr_base 261.2 KiB
perl-PathTools aarch64 3.91-511.fc42 copr_base 222.9 KiB
perl-Pod-Escapes noarch 1:1.07-511.fc41 fedora 24.9 KiB
perl-Pod-Perldoc noarch 3.28.01-512.fc41 fedora 163.7 KiB
perl-Pod-Simple noarch 1:3.45-511.fc41 fedora 560.9 KiB
perl-Pod-Usage noarch 4:2.03-511.fc41 fedora 84.8 KiB
perl-Scalar-List-Utils aarch64 5:1.68-1.fc42 copr_base 151.5 KiB
perl-SelectSaver noarch 1.02-512.fc42 copr_base 2.2 KiB
perl-Socket aarch64 4:2.038-511.fc42 copr_base 142.8 KiB
perl-Storable aarch64 1:3.32-511.fc42 copr_base 242.5 KiB
perl-Symbol noarch 1.09-512.fc42 copr_base 6.8 KiB
perl-Term-ANSIColor noarch 5.01-512.fc41 fedora 97.5 KiB
perl-Term-Cap noarch 1.18-511.fc41 fedora 29.3 KiB
perl-Text-ParseWords noarch 3.31-511.fc41 fedora 13.6 KiB
perl-Text-Tabs+Wrap noarch 2024.001-511.fc41 fedora 22.6 KiB
perl-Time-Local noarch 2:1.350-511.fc41 fedora 69.0 KiB
perl-URI noarch 5.31-1.fc42 fedora 257.0 KiB
perl-base noarch 2.27-512.fc42 copr_base 12.5 KiB
perl-constant noarch 1.33-512.fc41 fedora 26.2 KiB
perl-if noarch 0.61.000-512.fc42 copr_base 5.8 KiB
perl-interpreter aarch64 4:5.40.0-512.fc42 copr_base 173.1 KiB
perl-libnet noarch 3.15-512.fc41 fedora 289.4 KiB
perl-libs aarch64 4:5.40.0-512.fc42 copr_base 9.9 MiB
perl-locale noarch 1.12-512.fc42 copr_base 6.5 KiB
perl-mro aarch64 1.29-512.fc42 copr_base 80.5 KiB
perl-overload noarch 1.37-512.fc42 copr_base 71.5 KiB
perl-overloading noarch 0.02-512.fc42 copr_base 4.8 KiB
perl-parent noarch 1:0.244-1.fc42 fedora 10.3 KiB
perl-podlators noarch 1:6.0.2-2.fc41 fedora 317.5 KiB
perl-vars noarch 1.05-512.fc42 copr_base 3.9 KiB
pixman aarch64 0.44.2-1.fc42 copr_base 644.4 KiB
pyproject-rpm-macros noarch 1.16.3-1.fc42 fedora 113.7 KiB
python-pip-wheel noarch 24.3.1-1.fc42 fedora 1.2 MiB
python-rpm-macros noarch 3.13-3.fc41 fedora 22.1 KiB
python3 aarch64 3.13.1-2.fc42 copr_base 82.5 KiB
python3-cairo aarch64 1.25.1-5.fc42 copr_base 515.3 KiB
python3-contourpy aarch64 1.3.1-1.fc42 copr_base 750.4 KiB
python3-cycler noarch 0.11.0-13.fc41 fedora 37.6 KiB
python3-dateutil noarch 1:2.8.2-16.fc41 fedora 879.2 KiB
python3-fonttools aarch64 4.55.2-1.fc42 copr_base 17.9 MiB
python3-kiwisolver aarch64 1.4.7-1.fc42 copr_base 157.0 KiB
python3-libs aarch64 3.13.1-2.fc42 copr_base 41.7 MiB
python3-matplotlib-data noarch 3.9.4-2.fc42 fedora 741.5 KiB
python3-matplotlib-data-fonts noarch 3.9.4-2.fc42 fedora 7.9 MiB
python3-matplotlib-tk aarch64 3.9.4-2.fc42 fedora 296.4 KiB
python3-numpy aarch64 1:2.2.1-1.fc42 fedora 34.0 MiB
python3-numpy-f2py aarch64 1:2.2.1-1.fc42 fedora 2.0 MiB
python3-olefile noarch 0.47-5.fc41 fedora 340.4 KiB
python3-packaging noarch 24.2-2.fc42 fedora 555.7 KiB
python3-pillow aarch64 11.0.0-1.fc42 fedora 4.8 MiB
python3-pillow-tk aarch64 11.0.0-1.fc42 fedora 249.0 KiB
python3-pyparsing noarch 3.1.2-7.fc41 fedora 1.0 MiB
python3-rpm-generators noarch 14-11.fc41 fedora 81.7 KiB
python3-rpm-macros noarch 3.13-3.fc41 fedora 6.4 KiB
python3-six noarch 1.16.0-23.fc41 fedora 118.3 KiB
python3-tkinter aarch64 3.13.1-2.fc42 copr_base 1.9 MiB
rhash aarch64 1.4.5-1.fc42 copr_base 389.8 KiB
spirv-tools-libs aarch64 2024.3-4.fc42 fedora 5.3 MiB
tcl aarch64 1:8.6.15-6.fc42 fedora 4.3 MiB
tk aarch64 1:8.6.15-1.fc42 fedora 3.9 MiB
tzdata noarch 2024b-1.fc42 fedora 1.6 MiB
vim-filesystem noarch 2:9.1.919-1.fc42 fedora 40.0 B
xkbcomp aarch64 1.4.7-2.fc41 fedora 273.1 KiB
xkeyboard-config noarch 2.43-1.fc42 fedora 6.6 MiB
xml-common noarch 0.6.3-65.fc41 fedora 78.4 KiB
xorg-x11-proto-devel noarch 2024.1-3.fc41 fedora 1.7 MiB
xorg-x11-server-common aarch64 21.1.15-1.fc42 fedora 127.1 KiB
xorg-x11-xauth aarch64 1:1.1.3-2.fc41 fedora 204.1 KiB
Transaction Summary:
Installing: 261 packages
Total size of inbound packages is 232 MiB. Need to download 232 MiB.
After this operation, 969 MiB extra will be used (install 969 MiB, remove 0 B).
[ 1/261] libXi-devel-0:1.8.2-1.fc42.aa 100% | 7.5 MiB/s | 115.8 KiB | 00m00s
[ 2/261] freeglut-devel-0:3.6.0-2.fc41 100% | 43.9 MiB/s | 944.5 KiB | 00m00s
[ 3/261] libXmu-devel-0:1.2.1-2.fc41.a 100% | 3.3 MiB/s | 27.2 KiB | 00m00s
[ 4/261] python3-flaky-0:3.8.1-3.fc41. 100% | 5.0 MiB/s | 45.7 KiB | 00m00s
[ 5/261] boost-devel-0:1.83.0-9.fc42.a 100% | 232.4 MiB/s | 14.2 MiB | 00m00s
[ 6/261] xorg-x11-server-Xvfb-0:21.1.1 100% | 21.8 MiB/s | 759.7 KiB | 00m00s
[ 7/261] python3-matplotlib-0:3.9.4-2. 100% | 88.0 MiB/s | 4.6 MiB | 00m00s
[ 8/261] zlib-ng-compat-devel-0:2.2.2- 100% | 2.2 MiB/s | 38.1 KiB | 00m00s
[ 9/261] cmake-0:3.31.2-1.fc42.aarch64 100% | 234.3 MiB/s | 7.5 MiB | 00m00s
[ 10/261] libglvnd-devel-1:1.7.0-5.fc42 100% | 17.1 MiB/s | 157.7 KiB | 00m00s
[ 11/261] libtiff-devel-0:4.7.0-2.fc42. 100% | 83.7 MiB/s | 257.1 KiB | 00m00s
[ 12/261] make-1:4.4.1-9.fc42.aarch64 100% | 140.2 MiB/s | 574.2 KiB | 00m00s
[ 13/261] perl-macros-4:5.40.0-512.fc42 100% | 6.3 MiB/s | 12.8 KiB | 00m00s
[ 14/261] pybind11-devel-0:2.13.6-1.fc4 100% | 28.9 MiB/s | 177.3 KiB | 00m00s
[ 15/261] python3-devel-0:3.13.1-2.fc42 100% | 116.6 MiB/s | 358.3 KiB | 00m00s
[ 16/261] python3-setuptools-0:74.1.3-4 100% | 121.1 MiB/s | 1.8 MiB | 00m00s
[ 17/261] python3-wheel-1:0.45.1-1.fc42 100% | 52.0 MiB/s | 159.6 KiB | 00m00s
[ 18/261] boost-0:1.83.0-9.fc42.aarch64 100% | 6.3 MiB/s | 12.9 KiB | 00m00s
[ 19/261] boost-numpy3-0:1.83.0-9.fc42. 100% | 12.6 MiB/s | 25.7 KiB | 00m00s
[ 20/261] freeglut-0:3.6.0-2.fc41.aarch 100% | 47.1 MiB/s | 144.8 KiB | 00m00s
[ 21/261] libX11-devel-0:1.8.10-2.fc42. 100% | 169.7 MiB/s | 1.0 MiB | 00m00s
[ 22/261] libXext-devel-0:1.3.6-2.fc41. 100% | 41.7 MiB/s | 85.4 KiB | 00m00s
[ 23/261] libXfixes-devel-0:6.0.1-4.fc4 100% | 12.4 MiB/s | 12.6 KiB | 00m00s
[ 24/261] libXi-0:1.8.2-1.fc42.aarch64 100% | 19.6 MiB/s | 40.1 KiB | 00m00s
[ 25/261] xorg-x11-proto-devel-0:2024.1 100% | 73.3 MiB/s | 300.3 KiB | 00m00s
[ 26/261] libXmu-0:1.2.1-2.fc41.aarch64 100% | 25.3 MiB/s | 77.7 KiB | 00m00s
[ 27/261] libXt-devel-0:1.3.1-1.fc42.aa 100% | 112.2 MiB/s | 459.8 KiB | 00m00s
[ 28/261] dejavu-sans-fonts-0:2.37-24.f 100% | 27.6 MiB/s | 1.3 MiB | 00m00s
[ 29/261] python3-cycler-0:0.11.0-13.fc 100% | 1.5 MiB/s | 21.3 KiB | 00m00s
[ 30/261] python3-dateutil-1:2.8.2-16.f 100% | 87.8 MiB/s | 359.7 KiB | 00m00s
[ 31/261] python3-matplotlib-data-0:3.9 100% | 36.6 MiB/s | 525.2 KiB | 00m00s
[ 32/261] python3-matplotlib-tk-0:3.9.4 100% | 8.3 MiB/s | 101.6 KiB | 00m00s
[ 33/261] python3-packaging-0:24.2-2.fc 100% | 50.1 MiB/s | 153.8 KiB | 00m00s
[ 34/261] python3-pillow-0:11.0.0-1.fc4 100% | 162.1 MiB/s | 995.8 KiB | 00m00s
[ 35/261] python3-pyparsing-0:3.1.2-7.f 100% | 90.3 MiB/s | 277.4 KiB | 00m00s
[ 36/261] libXau-0:1.0.12-1.fc42.aarch6 100% | 31.7 MiB/s | 32.5 KiB | 00m00s
[ 37/261] libXdmcp-0:1.1.5-2.fc41.aarch 100% | 12.2 MiB/s | 37.4 KiB | 00m00s
[ 38/261] libXfont2-0:2.0.7-1.fc41.aarc 100% | 47.9 MiB/s | 147.1 KiB | 00m00s
[ 39/261] libunwind-0:1.8.0-5.fc42.aarc 100% | 38.5 MiB/s | 78.8 KiB | 00m00s
[ 40/261] xorg-x11-server-common-0:21.1 100% | 18.0 MiB/s | 36.9 KiB | 00m00s
[ 41/261] xorg-x11-xauth-1:1.1.3-2.fc41 100% | 3.3 MiB/s | 34.1 KiB | 00m00s
[ 42/261] gcc-c++-0:15.0.0-0.2.fc42.aar 100% | 30.4 MiB/s | 13.6 MiB | 00m00s
[ 43/261] gcc-0:15.0.0-0.2.fc42.aarch64 100% | 69.6 MiB/s | 35.1 MiB | 00m01s
[ 44/261] libglvnd-1:1.7.0-5.fc42.aarch 100% | 18.4 MiB/s | 56.6 KiB | 00m00s
[ 45/261] libglvnd-core-devel-1:1.7.0-5 100% | 1.5 MiB/s | 18.0 KiB | 00m00s
[ 46/261] libglvnd-egl-1:1.7.0-5.fc42.a 100% | 16.9 MiB/s | 34.6 KiB | 00m00s
[ 47/261] libglvnd-gles-1:1.7.0-5.fc42. 100% | 2.1 MiB/s | 25.7 KiB | 00m00s
[ 48/261] libglvnd-glx-1:1.7.0-5.fc42.a 100% | 27.7 MiB/s | 113.3 KiB | 00m00s
[ 49/261] libglvnd-opengl-1:1.7.0-5.fc4 100% | 16.3 MiB/s | 33.4 KiB | 00m00s
[ 50/261] libzstd-devel-0:1.5.6-2.fc41. 100% | 50.6 MiB/s | 51.8 KiB | 00m00s
[ 51/261] boost-atomic-0:1.83.0-9.fc42. 100% | 8.2 MiB/s | 16.9 KiB | 00m00s
[ 52/261] boost-chrono-0:1.83.0-9.fc42. 100% | 11.0 MiB/s | 22.5 KiB | 00m00s
[ 53/261] boost-container-0:1.83.0-9.fc 100% | 17.9 MiB/s | 36.6 KiB | 00m00s
[ 54/261] boost-context-0:1.83.0-9.fc42 100% | 14.4 MiB/s | 14.8 KiB | 00m00s
[ 55/261] boost-contract-0:1.83.0-9.fc4 100% | 19.1 MiB/s | 39.1 KiB | 00m00s
[ 56/261] boost-coroutine-0:1.83.0-9.fc 100% | 17.4 MiB/s | 17.9 KiB | 00m00s
[ 57/261] boost-date-time-0:1.83.0-9.fc 100% | 13.3 MiB/s | 13.6 KiB | 00m00s
[ 58/261] boost-fiber-0:1.83.0-9.fc42.a 100% | 18.7 MiB/s | 38.2 KiB | 00m00s
[ 59/261] boost-filesystem-0:1.83.0-9.f 100% | 29.5 MiB/s | 60.4 KiB | 00m00s
[ 60/261] boost-graph-0:1.83.0-9.fc42.a 100% | 42.6 MiB/s | 130.8 KiB | 00m00s
[ 61/261] boost-iostreams-0:1.83.0-9.fc 100% | 17.6 MiB/s | 36.0 KiB | 00m00s
[ 62/261] boost-json-0:1.83.0-9.fc42.aa 100% | 66.0 MiB/s | 135.2 KiB | 00m00s
[ 63/261] cpp-0:15.0.0-0.2.fc42.aarch64 100% | 33.3 MiB/s | 11.4 MiB | 00m00s
[ 64/261] boost-locale-0:1.83.0-9.fc42. 100% | 15.2 MiB/s | 186.7 KiB | 00m00s
[ 65/261] boost-log-0:1.83.0-9.fc42.aar 100% | 99.7 MiB/s | 408.2 KiB | 00m00s
[ 66/261] boost-math-0:1.83.0-9.fc42.aa 100% | 62.1 MiB/s | 254.2 KiB | 00m00s
[ 67/261] boost-nowide-0:1.83.0-9.fc42. 100% | 17.9 MiB/s | 18.4 KiB | 00m00s
[ 68/261] boost-program-options-0:1.83. 100% | 30.7 MiB/s | 94.4 KiB | 00m00s
[ 69/261] libstdc++-devel-0:15.0.0-0.2. 100% | 17.9 MiB/s | 2.6 MiB | 00m00s
[ 70/261] boost-python3-0:1.83.0-9.fc42 100% | 16.3 MiB/s | 83.5 KiB | 00m00s
[ 71/261] boost-random-0:1.83.0-9.fc42. 100% | 6.9 MiB/s | 21.1 KiB | 00m00s
[ 72/261] boost-stacktrace-0:1.83.0-9.f 100% | 12.2 MiB/s | 24.9 KiB | 00m00s
[ 73/261] boost-regex-0:1.83.0-9.fc42.a 100% | 24.2 MiB/s | 99.3 KiB | 00m00s
[ 74/261] boost-serialization-0:1.83.0- 100% | 27.5 MiB/s | 112.4 KiB | 00m00s
[ 75/261] boost-system-0:1.83.0-9.fc42. 100% | 6.6 MiB/s | 13.6 KiB | 00m00s
[ 76/261] boost-test-0:1.83.0-9.fc42.aa 100% | 67.4 MiB/s | 207.0 KiB | 00m00s
[ 77/261] boost-thread-0:1.83.0-9.fc42. 100% | 17.5 MiB/s | 53.9 KiB | 00m00s
[ 78/261] boost-timer-0:1.83.0-9.fc42.a 100% | 6.4 MiB/s | 19.6 KiB | 00m00s
[ 79/261] boost-type_erasure-0:1.83.0-9 100% | 9.3 MiB/s | 28.5 KiB | 00m00s
[ 80/261] boost-wave-0:1.83.0-9.fc42.aa 100% | 45.7 MiB/s | 187.1 KiB | 00m00s
[ 81/261] libX11-xcb-0:1.8.10-2.fc42.aa 100% | 3.0 MiB/s | 12.1 KiB | 00m00s
[ 82/261] libX11-0:1.8.10-2.fc42.aarch6 100% | 89.5 MiB/s | 641.7 KiB | 00m00s
[ 83/261] libXext-0:1.3.6-2.fc41.aarch6 100% | 18.9 MiB/s | 38.8 KiB | 00m00s
[ 84/261] libXfixes-0:6.0.1-4.fc41.aarc 100% | 19.3 MiB/s | 19.7 KiB | 00m00s
[ 85/261] libXt-0:1.3.1-1.fc42.aarch64 100% | 85.4 MiB/s | 174.8 KiB | 00m00s
[ 86/261] libICE-devel-0:1.1.2-1.fc42.a 100% | 22.4 MiB/s | 45.9 KiB | 00m00s
[ 87/261] libSM-devel-0:1.2.5-1.fc42.aa 100% | 11.6 MiB/s | 11.9 KiB | 00m00s
[ 88/261] fonts-filesystem-1:2.0.5-17.f 100% | 8.3 MiB/s | 8.5 KiB | 00m00s
[ 89/261] python3-six-0:1.16.0-23.fc41. 100% | 13.4 MiB/s | 41.2 KiB | 00m00s
[ 90/261] tzdata-0:2024b-1.fc42.noarch 100% | 139.2 MiB/s | 712.7 KiB | 00m00s
[ 91/261] libxcb-devel-0:1.17.0-3.fc42. 100% | 75.6 MiB/s | 1.4 MiB | 00m00s
[ 92/261] libxcb-0:1.17.0-3.fc42.aarch6 100% | 80.5 MiB/s | 247.3 KiB | 00m00s
[ 93/261] python3-olefile-0:0.47-5.fc41 100% | 36.4 MiB/s | 74.6 KiB | 00m00s
[ 94/261] python3-pillow-tk-0:11.0.0-1. 100% | 3.4 MiB/s | 31.2 KiB | 00m00s
[ 95/261] xkbcomp-0:1.4.7-2.fc41.aarch6 100% | 11.8 MiB/s | 97.0 KiB | 00m00s
[ 96/261] libX11-common-0:1.8.10-2.fc42 100% | 34.3 MiB/s | 175.9 KiB | 00m00s
[ 97/261] xkeyboard-config-0:2.43-1.fc4 100% | 64.3 MiB/s | 988.3 KiB | 00m00s
[ 98/261] python3-matplotlib-data-fonts 100% | 75.5 MiB/s | 2.3 MiB | 00m00s
[ 99/261] libXau-devel-0:1.0.12-1.fc42. 100% | 2.7 MiB/s | 13.8 KiB | 00m00s
[100/261] libICE-0:1.1.2-1.fc42.aarch64 100% | 18.0 MiB/s | 73.6 KiB | 00m00s
[101/261] libuuid-devel-0:2.40.2-8.fc42 100% | 16.7 MiB/s | 34.2 KiB | 00m00s
[102/261] libSM-0:1.2.5-1.fc42.aarch64 100% | 20.8 MiB/s | 42.7 KiB | 00m00s
[103/261] libmpc-0:1.3.1-6.fc42.aarch64 100% | 17.1 MiB/s | 70.0 KiB | 00m00s
[104/261] kernel-headers-0:6.13.0-0.rc3 100% | 201.6 MiB/s | 1.6 MiB | 00m00s
[105/261] libxcrypt-devel-0:4.4.36-12.f 100% | 5.4 MiB/s | 27.8 KiB | 00m00s
[106/261] glibc-devel-0:2.40.9000-24.fc 100% | 60.9 MiB/s | 561.6 KiB | 00m00s
[107/261] libatomic-0:15.0.0-0.2.fc42.a 100% | 969.3 KiB/s | 17.4 KiB | 00m00s
[108/261] python3-0:3.13.1-2.fc42.aarch 100% | 26.8 MiB/s | 27.4 KiB | 00m00s
[109/261] libasan-0:15.0.0-0.2.fc42.aar 100% | 19.4 MiB/s | 456.3 KiB | 00m00s
[110/261] libubsan-0:15.0.0-0.2.fc42.aa 100% | 8.0 MiB/s | 188.3 KiB | 00m00s
[111/261] cmake-filesystem-0:3.31.2-1.f 100% | 5.9 MiB/s | 18.1 KiB | 00m00s
[112/261] python-pip-wheel-0:24.3.1-1.f 100% | 133.8 MiB/s | 1.2 MiB | 00m00s
[113/261] perl-interpreter-4:5.40.0-512 100% | 7.0 MiB/s | 71.7 KiB | 00m00s
[114/261] python3-libs-0:3.13.1-2.fc42. 100% | 295.2 MiB/s | 8.6 MiB | 00m00s
[115/261] perl-Carp-0:1.54-511.fc41.noa 100% | 2.8 MiB/s | 28.9 KiB | 00m00s
[116/261] perl-Exporter-0:5.78-511.fc41 100% | 10.1 MiB/s | 30.9 KiB | 00m00s
[117/261] perl-libs-4:5.40.0-512.fc42.a 100% | 99.0 MiB/s | 2.2 MiB | 00m00s
[118/261] liblerc-0:4.0.0-7.fc42.aarch6 100% | 48.0 MiB/s | 196.5 KiB | 00m00s
[119/261] libtiff-0:4.7.0-2.fc42.aarch6 100% | 65.9 MiB/s | 202.4 KiB | 00m00s
[120/261] libwebp-devel-0:1.5.0-1.fc42. 100% | 38.7 MiB/s | 39.6 KiB | 00m00s
[121/261] libwebp-0:1.5.0-1.fc42.aarch6 100% | 77.1 MiB/s | 236.8 KiB | 00m00s
[122/261] jbigkit-libs-0:2.1-30.fc42.aa 100% | 24.9 MiB/s | 51.0 KiB | 00m00s
[123/261] libjpeg-turbo-0:3.0.4-1.fc42. 100% | 64.3 MiB/s | 263.5 KiB | 00m00s
[124/261] libjpeg-turbo-devel-0:3.0.4-1 100% | 3.5 MiB/s | 97.8 KiB | 00m00s
[125/261] mesa-libGL-0:24.3.1-1.fc42.aa 100% | 51.4 MiB/s | 157.9 KiB | 00m00s
[126/261] libXxf86vm-0:1.1.6-1.fc42.aar 100% | 16.3 MiB/s | 16.7 KiB | 00m00s
[127/261] libwayland-client-0:1.23.0-2. 100% | 15.8 MiB/s | 32.4 KiB | 00m00s
[128/261] mesa-libEGL-0:24.3.1-1.fc42.a 100% | 42.8 MiB/s | 131.5 KiB | 00m00s
[129/261] libwayland-server-0:1.23.0-2. 100% | 20.3 MiB/s | 41.6 KiB | 00m00s
[130/261] emacs-filesystem-1:30.0-3.fc4 100% | 7.0 MiB/s | 7.1 KiB | 00m00s
[131/261] vim-filesystem-2:9.1.919-1.fc 100% | 16.1 MiB/s | 16.4 KiB | 00m00s
[132/261] cmake-data-0:3.31.2-1.fc42.no 100% | 209.7 MiB/s | 1.9 MiB | 00m00s
[133/261] expat-0:2.6.4-1.fc42.aarch64 100% | 26.1 MiB/s | 107.1 KiB | 00m00s
[134/261] jsoncpp-0:1.9.5-8.fc42.aarch6 100% | 30.0 MiB/s | 92.2 KiB | 00m00s
[135/261] libuv-1:1.49.2-1.fc42.aarch64 100% | 83.4 MiB/s | 256.1 KiB | 00m00s
[136/261] liblerc-devel-0:4.0.0-7.fc42. 100% | 66.2 MiB/s | 3.2 MiB | 00m00s
[137/261] rhash-0:1.4.5-1.fc42.aarch64 100% | 31.1 MiB/s | 190.9 KiB | 00m00s
[138/261] pixman-0:0.44.2-1.fc42.aarch6 100% | 31.7 MiB/s | 195.0 KiB | 00m00s
[139/261] libxkbfile-0:1.1.3-2.fc42.aar 100% | 43.6 MiB/s | 89.3 KiB | 00m00s
[140/261] python3-tkinter-0:3.13.1-2.fc 100% | 69.3 MiB/s | 354.6 KiB | 00m00s
[141/261] tcl-1:8.6.15-6.fc42.aarch64 100% | 157.4 MiB/s | 1.1 MiB | 00m00s
[142/261] tk-1:8.6.15-1.fc42.aarch64 100% | 161.1 MiB/s | 1.6 MiB | 00m00s
[143/261] libXft-0:2.3.8-7.fc41.aarch64 100% | 14.0 MiB/s | 71.5 KiB | 00m00s
[144/261] fontconfig-0:2.15.0-8.fc41.aa 100% | 33.5 MiB/s | 274.2 KiB | 00m00s
[145/261] default-fonts-core-sans-0:4.2 100% | 30.5 MiB/s | 31.3 KiB | 00m00s
[146/261] libXrender-0:0.9.12-1.fc42.aa 100% | 25.3 MiB/s | 25.9 KiB | 00m00s
[147/261] xml-common-0:0.6.3-65.fc41.no 100% | 7.6 MiB/s | 31.2 KiB | 00m00s
[148/261] abattis-cantarell-vf-fonts-0: 100% | 29.4 MiB/s | 120.2 KiB | 00m00s
[149/261] google-noto-sans-vf-fonts-0:2 100% | 116.0 MiB/s | 593.9 KiB | 00m00s
[150/261] google-noto-fonts-common-0:20 100% | 5.8 MiB/s | 17.8 KiB | 00m00s
[151/261] freetype-0:2.13.3-1.fc42.aarc 100% | 96.2 MiB/s | 393.8 KiB | 00m00s
[152/261] libimagequant-0:4.0.3-5.fc42. 100% | 85.9 MiB/s | 263.8 KiB | 00m00s
[153/261] lcms2-0:2.16-4.fc42.aarch64 100% | 42.9 MiB/s | 175.9 KiB | 00m00s
[154/261] libraqm-0:0.10.1-1.fc42.aarch 100% | 7.0 MiB/s | 21.6 KiB | 00m00s
[155/261] openjpeg-0:2.5.2-4.fc42.aarch 100% | 58.7 MiB/s | 180.3 KiB | 00m00s
[156/261] libqhull_r-1:8.0.2-5.fc42.aar 100% | 62.7 MiB/s | 192.7 KiB | 00m00s
[157/261] python3-cairo-0:1.25.1-5.fc42 100% | 39.6 MiB/s | 121.7 KiB | 00m00s
[158/261] python3-kiwisolver-0:1.4.7-1. 100% | 30.1 MiB/s | 61.7 KiB | 00m00s
[159/261] python3-contourpy-0:1.3.1-1.f 100% | 15.7 MiB/s | 241.3 KiB | 00m00s
[160/261] python3-numpy-1:2.2.1-1.fc42. 100% | 275.5 MiB/s | 6.6 MiB | 00m00s
[161/261] python3-numpy-f2py-1:2.2.1-1. 100% | 32.0 MiB/s | 490.8 KiB | 00m00s
[162/261] libfontenc-0:1.1.8-2.fc42.aar 100% | 31.0 MiB/s | 31.7 KiB | 00m00s
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Warning: skipped OpenPGP checks for 121 packages from repositories: copr_base, https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch
Complete!
Finish: build setup for smoldyn-2.72-5.fc42.src.rpm
Start: rpmbuild smoldyn-2.72-5.fc42.src.rpm
Building target platforms: aarch64
Building for target aarch64
setting SOURCE_DATE_EPOCH=1721433600
Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.9ksR9Y
+ umask 022
+ cd /builddir/build/BUILD/smoldyn-2.72-build
+ test -d /builddir/build/BUILD/smoldyn-2.72-build
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/smoldyn-2.72-build
+ /usr/bin/rm -rf /builddir/build/BUILD/smoldyn-2.72-build
+ /usr/bin/mkdir -p /builddir/build/BUILD/smoldyn-2.72-build
+ /usr/bin/mkdir -p /builddir/build/BUILD/smoldyn-2.72-build/SPECPARTS
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.cgzHYX
+ umask 022
+ cd /builddir/build/BUILD/smoldyn-2.72-build
+ cd /builddir/build/BUILD/smoldyn-2.72-build
+ rm -rf Smoldyn-2.72
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/Smoldyn-2.72.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd Smoldyn-2.72
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ echo 'Patch #0 (smoldyn-fix_libpaths.patch):'
Patch #0 (smoldyn-fix_libpaths.patch):
+ /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .fix_libpaths --fuzz=0
patching file CMakeLists.txt
Patch #1 (smoldyn-freeglut.patch):
+ echo 'Patch #1 (smoldyn-freeglut.patch):'
+ /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .freeglut --fuzz=0
patching file CMakeLists.txt
Hunk #1 succeeded at 370 (offset 44 lines).
Patch #2 (smoldyn-create_soname.patch):
+ echo 'Patch #2 (smoldyn-create_soname.patch):'
+ /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .create_soname --fuzz=0
patching file CMakeLists.txt
Hunk #1 succeeded at 490 (offset 5 lines).
Hunk #2 succeeded at 522 (offset 52 lines).
Patch #3 (smoldyn-avoid_automatic_wheel.patch):
+ echo 'Patch #3 (smoldyn-avoid_automatic_wheel.patch):'
+ /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .avoid_automatic_wheel --fuzz=0
patching file source/python/CMakeLists.txt
Hunk #1 succeeded at 20 (offset -3 lines).
+ rm -rf source/MSVClibs
+ rm -rf source/pybind11
+ rm -rf source/BioNetGen source/MinGWlibs Toolchain-mingw32.cmake
+ rm -rf source/vcell/SimpleMesh.cpp source/vcell/SimpleMesh.h source/vcell/SimpleValueProvider.cpp source/vcell/SimpleValueProvider.h source/vcell/zconf.h source/vcell/zlib.h source/vcell/zlib.lib source/NextSubVolume/Eigen
+ rm -rf source/NextSubVolume/boost_include
+ rm -f 'source/vtk/*'
+ find . -type f -name '*.h' -exec chmod 0644 '{}' ';'
+ find . -type f -name '*.c' -exec chmod 0644 '{}' ';'
+ find . -type f -name '*.pdf' -exec chmod 0644 '{}' ';'
+ find . -type f -name '*.txt' -exec chmod 0644 '{}' ';'
+ find . -type f -name '*.txt' -exec sed -i 's/\r$//' '{}' ';'
+ sed -e 's|../../../source/BioNetGen/BNG2.pl|/usr/share/perl5/vendor_perl/BioNetGen/BNG2.pl|g' -i examples/S95_regression/lrmsim.txt examples/S12_bionetgen/lrm/lrmsim.txt examples/S12_bionetgen/abba/abbasim.txt examples/S94_archive/Andrews_2016/BioNetGen/lrm/lrmsim.txt examples/S94_archive/Andrews_2016/BioNetGen/abba/abbasim.txt
+ cp -p source/libSteve/SFMT/LICENSE.txt source/libSteve/SFMT/SFMT-LICENSE.txt
+ cp -p source/libSteve/SFMT/README.txt source/libSteve/SFMT/SFMT-README.txt
+ find -name '*.pyc' -delete
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.KJoqbt
+ umask 022
+ cd /builddir/build/BUILD/smoldyn-2.72-build
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd Smoldyn-2.72
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -Wno-dev -DCPACK_BINARY_STGZ:BOOL=OFF -DCPACK_BINARY_TGZ:BOOL=OFF -DCPACK_BINARY_TZ:BOOL=OFF -DCPACK_SOURCE_TBZ2:BOOL=OFF -DCPACK_SOURCE_TGZ:BOOL=OFF -DCPACK_SOURCE_TXZ:BOOL=OFF -DCPACK_SOURCE_TZ:BOOL=OFF -DOPTION_VCELL:BOOL=OFF -DOPTION_VTK:BOOL=OFF -DBUILD_SHARED_LIBS:BOOL=ON -DSMOLDYN_VERSION:STRING=2.72 -DSMOLDYN_VERSION_MAJOR:STRING=2 -DOPTION_TARGET_LIBSMOLDYN:BOOL=ON -DOPTION_STATIC:BOOL=OFF -DOPTION_PYTHON:BOOL=ON -DPYBIND11_FINDPYTHON:BOOL=ON -Dpybind11_DIR:PATH=/usr/share/cmake/pybind11 -DOPTION_USE_ZLIB:BOOL=ON -DOPTION_PDE:BOOL=ON -DPERL_VENDORLIB:PATH=/usr/share/perl5/vendor_perl -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_INSTALL_LIBDIR:PATH=/usr/lib64 -DCMAKE_INSTALL_PREFIX:PATH=/usr -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE -DCMAKE_COLOR_MAKEFILE:BOOL=ON -DCMAKE_SKIP_RPATH:BOOL=YES -DHAVE_GL_FREEGLUT_H=TRUE -DOPTION_EXAMPLES:BOOL=OFF -DOPTION_DOCS:BOOL=OFF
-- The CXX compiler identification is GNU 15.0.0
-- The C compiler identification is GNU 15.0.0
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Smoldyn version is set to: '2.72'
-- Compiling for Smoldyn: ON
-- Compiling for Libsmoldyn: ON
-- Option to compile Smoldyn for VCell: OFF
-- Option to cross-compile for Windows using MinGW: OFF
-- Option to include NextSubvolume: ON
-- Option to include VTK: OFF
-- Option to compile with static libraries: OFF
-- Option to include OpenGL support: ON
-- Option to include LibTiff: ON
-- Option to include Zlib: ON
-- Option to incude Python module: ON
-- Option to run Libsmoldyn examples: OFF
-- Option to build documentation: OFF
-- Performing Test C_FLAG_EXISTS
-- Performing Test C_FLAG_EXISTS - Success
-- Performing Test CXX_FLAG_EXISTS
-- Performing Test CXX_FLAG_EXISTS - Success
-- [COMPILER] Adding -Wno-unused-parameter
-- Build type: Release
-- Compiling on a Linux computer
-- CMAKE_CXX_FLAGS variable: '-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
-- BioNetGen path: '/usr/share/perl5/vendor_perl/BioNetGen/BNG2.pl'
-- Found OpenGL: /usr/lib64/libOpenGL.so
-- OpenGL found: '/usr/include', '/usr/lib64/libGL.so;/usr/lib64/libGLU.so'
-- Found GLUT: /usr/lib64/libglut.so
-- Found TIFF: /usr/lib64/libtiff.so (found version "4.7.0")
-- Found Libtiff: '/usr/include', '/usr/lib64/libtiff.so'
-- Found Zlib: '/usr/include', '/usr/lib64/libz.so'
-- Boost headers found: '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume/boost_include'
-- Found Python3: /usr/bin/python3.13 (found version "3.13.1") found components: Interpreter Development Development.Module Development.Embed
-- Performing Test HAS_FLTO
-- Performing Test HAS_FLTO - Success
-- Found pybind11: /usr/include (found version "2.13.6")
-- [TEST] Found 15 test scripts
-- Configuring done (2.1s)
-- Generating done (0.0s)
CMake Warning:
Manually-specified variables were not used by the project:
CMAKE_Fortran_FLAGS_RELEASE
CMAKE_INSTALL_DO_STRIP
LIB_INSTALL_DIR
SHARE_INSTALL_PREFIX
SYSCONF_INSTALL_DIR
-- Build files have been written to: /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build
+ /usr/bin/cmake --build redhat-linux-build -j4 --verbose
Change Dir: '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4
/usr/bin/cmake -S/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72 -B/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/CMakeFiles /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build//CMakeFiles/progress.marks
/usr/bin/gmake -f CMakeFiles/Makefile2 all
gmake[1]: Entering directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
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gmake[2]: Entering directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72 /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/NextSubVolume /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/NextSubVolume/CMakeFiles/nsv.dir/DependInfo.cmake "--color="
gmake[2]: Entering directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72 /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/libSteve /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/libSteve/CMakeFiles/Steve.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
gmake[2]: Leaving directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
/usr/bin/gmake -f source/NextSubVolume/CMakeFiles/nsv.dir/build.make source/NextSubVolume/CMakeFiles/nsv.dir/build
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gmake[2]: Entering directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
gmake[2]: Entering directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
[ 3%] Building CXX object source/NextSubVolume/CMakeFiles/nsv.dir/Species.cpp.o
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cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/NextSubVolume && /usr/bin/g++ -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -isystem /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume/boost_include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/NextSubVolume/CMakeFiles/nsv.dir/StructuredGrid.cpp.o -MF CMakeFiles/nsv.dir/StructuredGrid.cpp.o.d -o CMakeFiles/nsv.dir/StructuredGrid.cpp.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume/StructuredGrid.cpp
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/Geometry.c.o -MF CMakeFiles/Steve.dir/Geometry.c.o.d -o CMakeFiles/Steve.dir/Geometry.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/Geometry.c
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/List.c.o -MF CMakeFiles/Steve.dir/List.c.o.d -o CMakeFiles/Steve.dir/List.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/List.c
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/NextSubVolume && /usr/bin/g++ -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -isystem /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume/boost_include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/NextSubVolume/CMakeFiles/nsv.dir/Species.cpp.o -MF CMakeFiles/nsv.dir/Species.cpp.o.d -o CMakeFiles/nsv.dir/Species.cpp.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume/Species.cpp
[ 6%] Building CXX object source/NextSubVolume/CMakeFiles/nsv.dir/ReactionEquation.cpp.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/NextSubVolume && /usr/bin/g++ -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -isystem /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume/boost_include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/NextSubVolume/CMakeFiles/nsv.dir/ReactionEquation.cpp.o -MF CMakeFiles/nsv.dir/ReactionEquation.cpp.o.d -o CMakeFiles/nsv.dir/ReactionEquation.cpp.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume/ReactionEquation.cpp
[ 7%] Building C object source/libSteve/CMakeFiles/Steve.dir/math2.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/math2.c.o -MF CMakeFiles/Steve.dir/math2.c.o.d -o CMakeFiles/Steve.dir/math2.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/math2.c
[ 8%] Building C object source/libSteve/CMakeFiles/Steve.dir/opengl2.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/opengl2.c.o -MF CMakeFiles/Steve.dir/opengl2.c.o.d -o CMakeFiles/Steve.dir/opengl2.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/opengl2.c
[ 9%] Building CXX object source/NextSubVolume/CMakeFiles/nsv.dir/NextSubvolumeMethod.cpp.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/NextSubVolume && /usr/bin/g++ -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -isystem /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume/boost_include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/NextSubVolume/CMakeFiles/nsv.dir/NextSubvolumeMethod.cpp.o -MF CMakeFiles/nsv.dir/NextSubvolumeMethod.cpp.o.d -o CMakeFiles/nsv.dir/NextSubvolumeMethod.cpp.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume/NextSubvolumeMethod.cpp
[ 11%] Building CXX object source/NextSubVolume/CMakeFiles/nsv.dir/Kairos.cpp.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/NextSubVolume && /usr/bin/g++ -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -isystem /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume/boost_include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/NextSubVolume/CMakeFiles/nsv.dir/Kairos.cpp.o -MF CMakeFiles/nsv.dir/Kairos.cpp.o.d -o CMakeFiles/nsv.dir/Kairos.cpp.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume/Kairos.cpp
[ 12%] Building CXX object source/NextSubVolume/CMakeFiles/nsv.dir/Io.cpp.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/NextSubVolume && /usr/bin/g++ -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -isystem /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume/boost_include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/NextSubVolume/CMakeFiles/nsv.dir/Io.cpp.o -MF CMakeFiles/nsv.dir/Io.cpp.o.d -o CMakeFiles/nsv.dir/Io.cpp.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume/Io.cpp
[ 13%] Building C object source/libSteve/CMakeFiles/Steve.dir/parse.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/parse.c.o -MF CMakeFiles/Steve.dir/parse.c.o.d -o CMakeFiles/Steve.dir/parse.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/parse.c
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/parse.c: In function ‘Parse_ReadLine’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/parse.c:382:60: warning: comparison is always true due to limited range of data type [-Wtype-limits]
382 | while((ch=fgetc(pfp->fptr))!=EOF && ch!='\n' && ch!='\r');
| ^~
[ 14%] Building CXX object source/NextSubVolume/CMakeFiles/nsv.dir/Geometry.cpp.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/NextSubVolume && /usr/bin/g++ -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -isystem /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume/boost_include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/NextSubVolume/CMakeFiles/nsv.dir/Geometry.cpp.o -MF CMakeFiles/nsv.dir/Geometry.cpp.o.d -o CMakeFiles/nsv.dir/Geometry.cpp.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume/Geometry.cpp
[ 16%] Building C object source/libSteve/CMakeFiles/Steve.dir/queue.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/queue.c.o -MF CMakeFiles/Steve.dir/queue.c.o.d -o CMakeFiles/Steve.dir/queue.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/queue.c
[ 17%] Building C object source/libSteve/CMakeFiles/Steve.dir/random2.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/random2.c.o -MF CMakeFiles/Steve.dir/random2.c.o.d -o CMakeFiles/Steve.dir/random2.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/random2.c
[ 18%] Building C object source/libSteve/CMakeFiles/Steve.dir/Rn.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/Rn.c.o -MF CMakeFiles/Steve.dir/Rn.c.o.d -o CMakeFiles/Steve.dir/Rn.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/Rn.c
[ 19%] Building C object source/libSteve/CMakeFiles/Steve.dir/RnSort.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/RnSort.c.o -MF CMakeFiles/Steve.dir/RnSort.c.o.d -o CMakeFiles/Steve.dir/RnSort.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/RnSort.c
[ 20%] Building CXX object source/NextSubVolume/CMakeFiles/nsv.dir/nsvc.cpp.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/NextSubVolume && /usr/bin/g++ -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -isystem /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume/boost_include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/NextSubVolume/CMakeFiles/nsv.dir/nsvc.cpp.o -MF CMakeFiles/nsv.dir/nsvc.cpp.o.d -o CMakeFiles/nsv.dir/nsvc.cpp.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume/nsvc.cpp
[ 22%] Building C object source/libSteve/CMakeFiles/Steve.dir/rxnparam.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/rxnparam.c.o -MF CMakeFiles/Steve.dir/rxnparam.c.o.d -o CMakeFiles/Steve.dir/rxnparam.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/rxnparam.c
[ 23%] Building C object source/libSteve/CMakeFiles/Steve.dir/SimCommand.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/SimCommand.c.o -MF CMakeFiles/Steve.dir/SimCommand.c.o.d -o CMakeFiles/Steve.dir/SimCommand.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/SimCommand.c
[ 24%] Building C object source/libSteve/CMakeFiles/Steve.dir/Sphere.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/Sphere.c.o -MF CMakeFiles/Steve.dir/Sphere.c.o.d -o CMakeFiles/Steve.dir/Sphere.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/Sphere.c
[ 25%] Building C object source/libSteve/CMakeFiles/Steve.dir/string2.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/string2.c.o -MF CMakeFiles/Steve.dir/string2.c.o.d -o CMakeFiles/Steve.dir/string2.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/string2.c
[ 27%] Building C object source/libSteve/CMakeFiles/Steve.dir/SurfaceParam.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/SurfaceParam.c.o -MF CMakeFiles/Steve.dir/SurfaceParam.c.o.d -o CMakeFiles/Steve.dir/SurfaceParam.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/SurfaceParam.c
[ 28%] Building C object source/libSteve/CMakeFiles/Steve.dir/Zn.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/Zn.c.o -MF CMakeFiles/Steve.dir/Zn.c.o.d -o CMakeFiles/Steve.dir/Zn.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/Zn.c
[ 29%] Building C object source/libSteve/CMakeFiles/Steve.dir/SFMT/SFMT.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/SFMT/SFMT.c.o -MF CMakeFiles/Steve.dir/SFMT/SFMT.c.o.d -o CMakeFiles/Steve.dir/SFMT/SFMT.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/SFMT/SFMT.c
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/string2.c: In function ‘strmatheval’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/string2.c:1415:9: warning: ‘strncpy’ specified bound 512 equals destination size [-Wstringop-truncation]
1415 | strncpy(expr,expression,STRCHAR);
| ^
gmake[2]: Leaving directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
[ 29%] Built target Steve
gmake[2]: Leaving directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
[ 29%] Built target nsv
/usr/bin/gmake -f CMakeFiles/smoldyn_static.dir/build.make CMakeFiles/smoldyn_static.dir/depend
/usr/bin/gmake -f CMakeFiles/smoldyn_shared.dir/build.make CMakeFiles/smoldyn_shared.dir/depend
/usr/bin/gmake -f source/python/CMakeFiles/_pysmoldyn.dir/build.make source/python/CMakeFiles/_pysmoldyn.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72 /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72 /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/CMakeFiles/smoldyn_static.dir/DependInfo.cmake "--color="
gmake[2]: Entering directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72 /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72 /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/CMakeFiles/smoldyn_shared.dir/DependInfo.cmake "--color="
gmake[2]: Entering directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72 /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/python /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python/CMakeFiles/_pysmoldyn.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
gmake[2]: Leaving directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
/usr/bin/gmake -f CMakeFiles/smoldyn_static.dir/build.make CMakeFiles/smoldyn_static.dir/build
gmake[2]: Leaving directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
/usr/bin/gmake -f CMakeFiles/smoldyn_shared.dir/build.make CMakeFiles/smoldyn_shared.dir/build
/usr/bin/gmake -f source/python/CMakeFiles/_pysmoldyn.dir/build.make source/python/CMakeFiles/_pysmoldyn.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
gmake[2]: Entering directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
gmake[2]: Entering directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
[ 32%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolbng.c.o
[ 32%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolbng.c.o
[ 33%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolbng.c.o
[ 34%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolboxes.c.o
/usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolbng.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolbng.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolbng.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c
/usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolbng.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolbng.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolbng.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/usr/include/python3.13 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolbng.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolbng.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolbng.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c
/usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolboxes.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolboxes.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolboxes.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolboxes.c
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolboxes.c: In function ‘boxesupdatelists’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolboxes.c:783:55: warning: argument 1 range [18446744071562067968, 18446744073709551614] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=]
783 | bptr->neigh=(boxptr*) calloc(nneigh,sizeof(boxptr));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/random2.h:17,
from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolboxes.c:13:
/usr/include/stdlib.h:675:14: note: in a call to allocation function ‘calloc’ declared here
675 | extern void *calloc (size_t __nmemb, size_t __size)
| ^~~~~~
[ 35%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcmd.c.o
/usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcmd.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcmd.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcmd.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcmd.c
In file included from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:14:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c: In function ‘bngreadstring’:
In file included from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:14:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c: In function ‘bngreadstring’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1496:30: warning: ‘%s’ directive output may be truncated writing up to 4095 bytes into a region of size 4066 [-Wformat-truncation=]
1496 | CHECKS(er!=3,"Error reading BioNetGen file '%s'. Try again with '-v' flag for more information.",str1);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1496:30: warning: ‘%s’ directive output may be truncated writing up to 4095 bytes into a region of size 4066 [-Wformat-truncation=]
1496 | CHECKS(er!=3,"Error reading BioNetGen file '%s'. Try again with '-v' flag for more information.",str1);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1496:61: note: format string is defined here
1496 | CHECKS(er!=3,"Error reading BioNetGen file '%s'. Try again with '-v' flag for more information.",str1);
| ^~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1496:61: note: format string is defined here
1496 | CHECKS(er!=3,"Error reading BioNetGen file '%s'. Try again with '-v' flag for more information.",str1);
| ^~
In file included from /usr/include/stdio.h:970,
from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:8:
In function ‘snprintf’,
inlined from ‘bngreadstring’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1496:3:
In file included from /usr/include/stdio.h:970,
from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:8:
In function ‘snprintf’,
inlined from ‘bngreadstring’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1496:3:
/usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output between 80 and 4175 bytes into a destination of size 4096
68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
69 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
70 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
/usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output between 80 and 4175 bytes into a destination of size 4096
68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
69 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
70 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c: In function ‘bngreadstring’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c: In function ‘bngreadstring’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1495:30: warning: ‘%s’ directive output may be truncated writing up to 4095 bytes into a region of size 4080 [-Wformat-truncation=]
1495 | CHECKS(er!=2,"BioNetGen file '%s' not found",str1);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1495:30: warning: ‘%s’ directive output may be truncated writing up to 4095 bytes into a region of size 4080 [-Wformat-truncation=]
1495 | CHECKS(er!=2,"BioNetGen file '%s' not found",str1);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1495:47: note: format string is defined here
1495 | CHECKS(er!=2,"BioNetGen file '%s' not found",str1);
| ^~
In function ‘snprintf’,
inlined from ‘bngreadstring’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1495:3:
/usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output between 28 and 4123 bytes into a destination of size 4096
68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
69 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
70 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1495:47: note: format string is defined here
1495 | CHECKS(er!=2,"BioNetGen file '%s' not found",str1);
| ^~
In function ‘snprintf’,
inlined from ‘bngreadstring’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1495:3:
/usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output between 28 and 4123 bytes into a destination of size 4096
68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
69 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
70 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c: In function ‘bngreadstring’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c: In function ‘bngreadstring’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1450:31: warning: ‘%s’ directive output may be truncated writing up to 4095 bytes into a region of size 4087 [-Wformat-truncation=]
1450 | CHECKS(er!=-2,"invalid '%s' monomer name",str1);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1450:31: warning: ‘%s’ directive output may be truncated writing up to 4095 bytes into a region of size 4087 [-Wformat-truncation=]
1450 | CHECKS(er!=-2,"invalid '%s' monomer name",str1);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1450:41: note: format string is defined here
1450 | CHECKS(er!=-2,"invalid '%s' monomer name",str1);
| ^~
In function ‘snprintf’,
inlined from ‘bngreadstring’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1450:3:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1450:41: note: format string is defined here
1450 | CHECKS(er!=-2,"invalid '%s' monomer name",str1);
| ^~
/usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output between 24 and 4119 bytes into a destination of size 4096
68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
69 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
70 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
In function ‘snprintf’,
inlined from ‘bngreadstring’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1450:3:
/usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output between 24 and 4119 bytes into a destination of size 4096
68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
69 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
70 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c: In function ‘bngreadstring’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c: In function ‘bngreadstring’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1442:36: warning: ‘%s’ directive output may be truncated writing up to 4095 bytes into a region of size 4075 [-Wformat-truncation=]
1442 | CHECKS(!er,"error adding monomer %s",str1); }}
| ^~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1442:36: warning: ‘%s’ directive output may be truncated writing up to 4095 bytes into a region of size 4075 [-Wformat-truncation=]
1442 | CHECKS(!er,"error adding monomer %s",str1); }}
| ^~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1442:58: note: format string is defined here
1442 | CHECKS(!er,"error adding monomer %s",str1); }}
| ^~
In function ‘snprintf’,
inlined from ‘bngreadstring’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1442:4:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1442:58: note: format string is defined here
1442 | CHECKS(!er,"error adding monomer %s",str1); }}
| ^~
/usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output between 22 and 4117 bytes into a destination of size 4096
68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
69 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
70 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
In function ‘snprintf’,
inlined from ‘bngreadstring’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1442:4:
/usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output between 22 and 4117 bytes into a destination of size 4096
68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
69 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
70 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c: In function ‘bngreadstring’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c: In function ‘bngreadstring’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1441:39: warning: ‘%s’ directive output may be truncated writing up to 4095 bytes into a region of size 4082 [-Wformat-truncation=]
1441 | CHECKS(er!=-2,"monomer name '%s' is not permitted",str1);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1441:39: warning: ‘%s’ directive output may be truncated writing up to 4095 bytes into a region of size 4082 [-Wformat-truncation=]
1441 | CHECKS(er!=-2,"monomer name '%s' is not permitted",str1);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1441:54: note: format string is defined here
1441 | CHECKS(er!=-2,"monomer name '%s' is not permitted",str1);
| ^~
In function ‘snprintf’,
inlined from ‘bngreadstring’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1441:4:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1441:54: note: format string is defined here
1441 | CHECKS(er!=-2,"monomer name '%s' is not permitted",str1);
| ^~
In function ‘snprintf’,
inlined from ‘bngreadstring’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1441:4:
/usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output between 33 and 4128 bytes into a destination of size 4096
68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
69 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
70 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
/usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output between 33 and 4128 bytes into a destination of size 4096
68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
69 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
70 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c: In function ‘bngreadstring’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c: In function ‘bngreadstring’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1440:39: warning: ‘%s’ directive output may be truncated writing up to 4095 bytes into a region of size 4067 [-Wformat-truncation=]
1440 | CHECKS(er!=-1,"out of memory adding monomer %s",str1);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1440:39: warning: ‘%s’ directive output may be truncated writing up to 4095 bytes into a region of size 4067 [-Wformat-truncation=]
1440 | CHECKS(er!=-1,"out of memory adding monomer %s",str1);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1440:69: note: format string is defined here
1440 | CHECKS(er!=-1,"out of memory adding monomer %s",str1);
| ^~
In function ‘snprintf’,
inlined from ‘bngreadstring’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1440:4:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1440:69: note: format string is defined here
1440 | CHECKS(er!=-1,"out of memory adding monomer %s",str1);
| ^~
In function ‘snprintf’,
inlined from ‘bngreadstring’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1440:4:
/usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output between 30 and 4125 bytes into a destination of size 4096
68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
69 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
70 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
/usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output between 30 and 4125 bytes into a destination of size 4096
68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
69 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
70 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:14:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c: In function ‘bngreadstring’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1496:30: warning: ‘%s’ directive output may be truncated writing up to 4095 bytes into a region of size 4066 [-Wformat-truncation=]
1496 | CHECKS(er!=3,"Error reading BioNetGen file '%s'. Try again with '-v' flag for more information.",str1);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1496:61: note: format string is defined here
1496 | CHECKS(er!=3,"Error reading BioNetGen file '%s'. Try again with '-v' flag for more information.",str1);
| ^~
In file included from /usr/include/stdio.h:970,
from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:8:
In function ‘snprintf’,
inlined from ‘bngreadstring’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1496:3:
/usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output between 80 and 4175 bytes into a destination of size 4096
68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
69 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
70 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c: In function ‘bngreadstring’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1495:30: warning: ‘%s’ directive output may be truncated writing up to 4095 bytes into a region of size 4080 [-Wformat-truncation=]
1495 | CHECKS(er!=2,"BioNetGen file '%s' not found",str1);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1495:47: note: format string is defined here
1495 | CHECKS(er!=2,"BioNetGen file '%s' not found",str1);
| ^~
In function ‘snprintf’,
inlined from ‘bngreadstring’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1495:3:
/usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output between 28 and 4123 bytes into a destination of size 4096
68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
69 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
70 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c: In function ‘bngreadstring’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1450:31: warning: ‘%s’ directive output may be truncated writing up to 4095 bytes into a region of size 4087 [-Wformat-truncation=]
1450 | CHECKS(er!=-2,"invalid '%s' monomer name",str1);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1450:41: note: format string is defined here
1450 | CHECKS(er!=-2,"invalid '%s' monomer name",str1);
| ^~
In function ‘snprintf’,
inlined from ‘bngreadstring’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1450:3:
/usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output between 24 and 4119 bytes into a destination of size 4096
68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
69 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
70 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c: In function ‘bngreadstring’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1442:36: warning: ‘%s’ directive output may be truncated writing up to 4095 bytes into a region of size 4075 [-Wformat-truncation=]
1442 | CHECKS(!er,"error adding monomer %s",str1); }}
| ^~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1442:58: note: format string is defined here
1442 | CHECKS(!er,"error adding monomer %s",str1); }}
| ^~
In function ‘snprintf’,
inlined from ‘bngreadstring’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1442:4:
/usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output between 22 and 4117 bytes into a destination of size 4096
68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
69 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
70 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c: In function ‘bngreadstring’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1441:39: warning: ‘%s’ directive output may be truncated writing up to 4095 bytes into a region of size 4082 [-Wformat-truncation=]
1441 | CHECKS(er!=-2,"monomer name '%s' is not permitted",str1);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1441:54: note: format string is defined here
1441 | CHECKS(er!=-2,"monomer name '%s' is not permitted",str1);
| ^~
In function ‘snprintf’,
inlined from ‘bngreadstring’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1441:4:
/usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output between 33 and 4128 bytes into a destination of size 4096
68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
69 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
70 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c: In function ‘bngreadstring’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1440:39: warning: ‘%s’ directive output may be truncated writing up to 4095 bytes into a region of size 4067 [-Wformat-truncation=]
1440 | CHECKS(er!=-1,"out of memory adding monomer %s",str1);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1440:69: note: format string is defined here
1440 | CHECKS(er!=-1,"out of memory adding monomer %s",str1);
| ^~
In function ‘snprintf’,
inlined from ‘bngreadstring’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolbng.c:1440:4:
/usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output between 30 and 4125 bytes into a destination of size 4096
68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
69 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
70 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
[ 37%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolboxes.c.o
[ 38%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolboxes.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/usr/include/python3.13 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolboxes.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolboxes.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolboxes.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolboxes.c
/usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolboxes.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolboxes.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolboxes.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolboxes.c
[ 39%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcmd.c.o
/usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcmd.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcmd.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcmd.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcmd.c
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolboxes.c: In function ‘boxesupdatelists’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolboxes.c:783:55: warning: argument 1 range [18446744071562067968, 18446744073709551614] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=]
783 | bptr->neigh=(boxptr*) calloc(nneigh,sizeof(boxptr));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/random2.h:17,
from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolboxes.c:13:
/usr/include/stdlib.h:675:14: note: in a call to allocation function ‘calloc’ declared here
675 | extern void *calloc (size_t __nmemb, size_t __size)
| ^~~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolboxes.c: In function ‘boxesupdatelists’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolboxes.c:783:55: warning: argument 1 range [18446744071562067968, 18446744073709551614] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=]
783 | bptr->neigh=(boxptr*) calloc(nneigh,sizeof(boxptr));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/random2.h:17,
from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolboxes.c:13:
/usr/include/stdlib.h:675:14: note: in a call to allocation function ‘calloc’ declared here
675 | extern void *calloc (size_t __nmemb, size_t __size)
| ^~~~~~
[ 40%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcmd.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/usr/include/python3.13 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcmd.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcmd.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcmd.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcmd.c
[ 41%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcomparts.c.o
/usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcomparts.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcomparts.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcomparts.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcomparts.c
In file included from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcomparts.c:18:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcomparts.c: In function ‘compartreadstring’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcomparts.c:894:29: warning: ‘%s’ directive output may be truncated writing up to 4095 bytes into a region of size 4082 [-Wformat-truncation=]
894 | CHECKS(s>=0,"surface name '%s' not recognized",nm);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcomparts.c:894:44: note: format string is defined here
894 | CHECKS(s>=0,"surface name '%s' not recognized",nm);
| ^~
In file included from /usr/include/stdio.h:970,
from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcomparts.c:9:
In function ‘snprintf’,
inlined from ‘compartreadstring’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcomparts.c:894:3:
/usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output between 31 and 4126 bytes into a destination of size 4096
68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
69 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
70 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
[ 43%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcomparts.c.o
/usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcomparts.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcomparts.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcomparts.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcomparts.c
In file included from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcomparts.c:18:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcomparts.c: In function ‘compartreadstring’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcomparts.c:894:29: warning: ‘%s’ directive output may be truncated writing up to 4095 bytes into a region of size 4082 [-Wformat-truncation=]
894 | CHECKS(s>=0,"surface name '%s' not recognized",nm);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcomparts.c:894:44: note: format string is defined here
894 | CHECKS(s>=0,"surface name '%s' not recognized",nm);
| ^~
In file included from /usr/include/stdio.h:970,
from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcomparts.c:9:
In function ‘snprintf’,
inlined from ‘compartreadstring’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcomparts.c:894:3:
/usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output between 31 and 4126 bytes into a destination of size 4096
68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
69 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
70 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
[ 44%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcomparts.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/usr/include/python3.13 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcomparts.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcomparts.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcomparts.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcomparts.c
In file included from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcomparts.c:18:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcomparts.c: In function ‘compartreadstring’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcomparts.c:894:29: warning: ‘%s’ directive output may be truncated writing up to 4095 bytes into a region of size 4082 [-Wformat-truncation=]
894 | CHECKS(s>=0,"surface name '%s' not recognized",nm);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcomparts.c:894:44: note: format string is defined here
894 | CHECKS(s>=0,"surface name '%s' not recognized",nm);
| ^~
In file included from /usr/include/stdio.h:970,
from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcomparts.c:9:
In function ‘snprintf’,
inlined from ‘compartreadstring’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolcomparts.c:894:3:
/usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output between 31 and 4126 bytes into a destination of size 4096
68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
69 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
70 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
[ 45%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolfilament.c.o
/usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolfilament.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolfilament.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolfilament.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolfilament.c
[ 46%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolfilament.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/usr/include/python3.13 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolfilament.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolfilament.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolfilament.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolfilament.c
[ 48%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolgraphics.c.o
/usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolgraphics.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolgraphics.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolgraphics.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolgraphics.c
[ 49%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolfilament.c.o
/usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolfilament.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolfilament.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolfilament.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolfilament.c
[ 50%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolmolec.c.o
/usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolmolec.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolmolec.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolmolec.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolmolec.c
[ 51%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolgraphics.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/usr/include/python3.13 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolgraphics.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolgraphics.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolgraphics.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolgraphics.c
[ 53%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolgraphics.c.o
/usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolgraphics.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolgraphics.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolgraphics.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolgraphics.c
[ 54%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolport.c.o
/usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolport.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolport.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolport.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolport.c
[ 55%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolmolec.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/usr/include/python3.13 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolmolec.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolmolec.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolmolec.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolmolec.c
[ 56%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolmolec.c.o
/usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolmolec.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolmolec.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolmolec.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolmolec.c
[ 58%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smollattice.c.o
/usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smollattice.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smollattice.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smollattice.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smollattice.c
[ 59%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolport.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/usr/include/python3.13 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolport.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolport.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolport.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolport.c
[ 60%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolport.c.o
/usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolport.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolport.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolport.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolport.c
[ 61%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolreact.c.o
/usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolreact.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolreact.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolreact.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolreact.c
[ 62%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smollattice.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/usr/include/python3.13 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smollattice.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smollattice.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smollattice.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smollattice.c
[ 64%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolrule.c.o
/usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolrule.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolrule.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolrule.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolrule.c
[ 65%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolreact.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/usr/include/python3.13 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolreact.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolreact.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolreact.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolreact.c
[ 66%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smollattice.c.o
/usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smollattice.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smollattice.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smollattice.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smollattice.c
[ 67%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolrule.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/usr/include/python3.13 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolrule.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolrule.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolrule.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolrule.c
[ 69%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolreact.c.o
/usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolreact.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolreact.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolreact.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolreact.c
[ 70%] Building CXX object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsim.cpp.o
/usr/bin/g++ -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsim.cpp.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsim.cpp.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsim.cpp.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolsim.cpp
[ 71%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolrule.c.o
/usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolrule.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolrule.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolrule.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolrule.c
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolsim.cpp: In function ‘simParseError’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolsim.cpp:166:58: warning: ‘%s’ directive writing up to 4095 bytes into a region of size between 603 and 4698 [-Wformat-overflow=]
166 | sprintf(ErrorLineAndString,"%s\nMessage: %s",parseerrstr,ErrorString);
| ^~ ~~~~~~~~~~~
In file included from /usr/include/stdio.h:970,
from /usr/include/c++/15/cstdio:47,
from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolsim.cpp:12:
In function ‘sprintf’,
inlined from ‘simParseError’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolsim.cpp:166:10:
/usr/include/bits/stdio2.h:30:34: note: ‘__sprintf_chk’ output between 11 and 8201 bytes into a destination of size 4708
30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
31 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
32 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
[ 72%] Building CXX object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsim.cpp.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/g++ -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/usr/include/python3.13 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsim.cpp.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsim.cpp.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsim.cpp.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolsim.cpp
[ 74%] Building CXX object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsim.cpp.o
/usr/bin/g++ -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsim.cpp.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsim.cpp.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsim.cpp.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolsim.cpp
In file included from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smoldyn.h:15,
from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolsim.cpp:27:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/../python/CallbackFunc.h:20:7: warning: ‘CallbackFunc’ declared with greater visibility than the type of its field ‘CallbackFunc::func_’ [-Wattributes]
20 | class CallbackFunc
| ^~~~~~~~~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/../python/CallbackFunc.h:20:7: warning: ‘CallbackFunc’ declared with greater visibility than the type of its field ‘CallbackFunc::target_’ [-Wattributes]
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/../python/CallbackFunc.h:20:7: warning: ‘CallbackFunc’ declared with greater visibility than the type of its field ‘CallbackFunc::args_’ [-Wattributes]
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolsim.cpp: In function ‘simParseError’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolsim.cpp:166:58: warning: ‘%s’ directive writing up to 4095 bytes into a region of size between 603 and 4698 [-Wformat-overflow=]
166 | sprintf(ErrorLineAndString,"%s\nMessage: %s",parseerrstr,ErrorString);
| ^~ ~~~~~~~~~~~
In file included from /usr/include/stdio.h:970,
from /usr/include/c++/15/cstdio:47,
from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolsim.cpp:12:
In function ‘sprintf’,
inlined from ‘simParseError’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolsim.cpp:166:10:
/usr/include/bits/stdio2.h:30:34: note: ‘__sprintf_chk’ output between 11 and 8201 bytes into a destination of size 4708
30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
31 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
32 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
[ 75%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsurface.c.o
/usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsurface.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsurface.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsurface.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolsurface.c
[ 76%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsurface.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/usr/include/python3.13 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsurface.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsurface.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsurface.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolsurface.c
[ 77%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsurface.c.o
/usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsurface.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsurface.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsurface.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolsurface.c
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolsim.cpp: In function ‘simParseError’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolsim.cpp:166:58: warning: ‘%s’ directive writing up to 4095 bytes into a region of size between 603 and 4698 [-Wformat-overflow=]
166 | sprintf(ErrorLineAndString,"%s\nMessage: %s",parseerrstr,ErrorString);
| ^~ ~~~~~~~~~~~
In file included from /usr/include/stdio.h:970,
from /usr/include/c++/15/cstdio:47,
from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolsim.cpp:12:
In function ‘sprintf’,
inlined from ‘simParseError’ at /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolsim.cpp:166:10:
/usr/include/bits/stdio2.h:30:34: note: ‘__sprintf_chk’ output between 11 and 8201 bytes into a destination of size 4708
30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
31 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
32 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
[ 79%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolwall.c.o
/usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolwall.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolwall.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolwall.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolwall.c
[ 80%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolwall.c.o
/usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolwall.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolwall.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolwall.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolwall.c
[ 81%] Building CXX object CMakeFiles/smoldyn_static.dir/source/Smoldyn/libsmoldyn.cpp.o
/usr/bin/g++ -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/libsmoldyn.cpp.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/libsmoldyn.cpp.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/libsmoldyn.cpp.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/libsmoldyn.cpp
[ 82%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolwall.c.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/usr/include/python3.13 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolwall.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolwall.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolwall.c.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolwall.c
[ 83%] Building CXX object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/libsmoldyn.cpp.o
/usr/bin/g++ -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/libsmoldyn.cpp.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/libsmoldyn.cpp.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/libsmoldyn.cpp.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/libsmoldyn.cpp
[ 85%] Linking CXX static library libsmoldyn_static.a
/usr/bin/cmake -P CMakeFiles/smoldyn_static.dir/cmake_clean_target.cmake
[ 86%] Building CXX object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/libsmoldyn.cpp.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/g++ -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/usr/include/python3.13 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/libsmoldyn.cpp.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/libsmoldyn.cpp.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/libsmoldyn.cpp.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/libsmoldyn.cpp
/usr/bin/cmake -E cmake_link_script CMakeFiles/smoldyn_static.dir/link.txt --verbose=1
/usr/bin/ar qc libsmoldyn_static.a CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolbng.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolboxes.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcmd.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcomparts.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolfilament.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolgraphics.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolmolec.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolport.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smollattice.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolreact.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolrule.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsim.cpp.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsurface.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolwall.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/libsmoldyn.cpp.o source/libSteve/CMakeFiles/Steve.dir/Geometry.c.o source/libSteve/CMakeFiles/Steve.dir/List.c.o source/libSteve/CMakeFiles/Steve.dir/math2.c.o source/libSteve/CMakeFiles/Steve.dir/opengl2.c.o source/libSteve/CMakeFiles/Steve.dir/parse.c.o source/libSteve/CMakeFiles/Steve.dir/queue.c.o source/libSteve/CMakeFiles/Steve.dir/random2.c.o source/libSteve/CMakeFiles/Steve.dir/Rn.c.o source/libSteve/CMakeFiles/Steve.dir/RnSort.c.o source/libSteve/CMakeFiles/Steve.dir/rxnparam.c.o source/libSteve/CMakeFiles/Steve.dir/SimCommand.c.o source/libSteve/CMakeFiles/Steve.dir/Sphere.c.o source/libSteve/CMakeFiles/Steve.dir/string2.c.o source/libSteve/CMakeFiles/Steve.dir/SurfaceParam.c.o source/libSteve/CMakeFiles/Steve.dir/Zn.c.o source/libSteve/CMakeFiles/Steve.dir/SFMT/SFMT.c.o source/NextSubVolume/CMakeFiles/nsv.dir/StructuredGrid.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Species.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/ReactionEquation.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/NextSubvolumeMethod.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Kairos.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Io.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Geometry.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/nsvc.cpp.o
/usr/bin/ranlib libsmoldyn_static.a
gmake[2]: Leaving directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
[ 86%] Built target smoldyn_static
[ 87%] Linking CXX shared library libsmoldyn_shared.so
/usr/bin/cmake -E cmake_link_script CMakeFiles/smoldyn_shared.dir/link.txt --verbose=1
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smoldyn.h:714:16: warning: type ‘struct latticestruct’ violates the C++ One Definition Rule [-Wodr]
714 | typedef struct latticestruct
| ^
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smoldyn.h:714:16: note: a different type is defined in another translation unit
714 | typedef struct latticestruct
| ^
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smoldyn.h:739:26: note: the first difference of corresponding definitions is field ‘nsv’
739 | NextSubvolumeMethod* nsv; // nsv class
| ^
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smoldyn.h:739:26: note: a field of same name but different type is defined in another translation unit
739 | NextSubvolumeMethod* nsv; // nsv class
| ^
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smoldyn.h:714:16: note: type name ‘NextSubvolumeMethod’ should match type name ‘Kairos::NextSubvolumeMethod’
714 | typedef struct latticestruct
| ^
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume/NextSubvolumeMethod.h:137:7: note: the incompatible type is defined here
137 | class NextSubvolumeMethod
| ^
In file included from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smoldyn.h:15,
from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/libsmoldyn.cpp:15:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/../python/CallbackFunc.h:20:7: warning: ‘CallbackFunc’ declared with greater visibility than the type of its field ‘CallbackFunc::func_’ [-Wattributes]
20 | class CallbackFunc
| ^~~~~~~~~~~~
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/../python/CallbackFunc.h:20:7: warning: ‘CallbackFunc’ declared with greater visibility than the type of its field ‘CallbackFunc::target_’ [-Wattributes]
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/../python/CallbackFunc.h:20:7: warning: ‘CallbackFunc’ declared with greater visibility than the type of its field ‘CallbackFunc::args_’ [-Wattributes]
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cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/_pysmoldyn.dir/link.txt --verbose=1
/usr/bin/ar qc lib_pysmoldyn.a CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolbng.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolboxes.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcmd.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcomparts.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolfilament.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolgraphics.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolmolec.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolport.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smollattice.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolreact.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolrule.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsim.cpp.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsurface.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolwall.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/libsmoldyn.cpp.o ../libSteve/CMakeFiles/Steve.dir/Geometry.c.o ../libSteve/CMakeFiles/Steve.dir/List.c.o ../libSteve/CMakeFiles/Steve.dir/math2.c.o ../libSteve/CMakeFiles/Steve.dir/opengl2.c.o ../libSteve/CMakeFiles/Steve.dir/parse.c.o ../libSteve/CMakeFiles/Steve.dir/queue.c.o ../libSteve/CMakeFiles/Steve.dir/random2.c.o ../libSteve/CMakeFiles/Steve.dir/Rn.c.o ../libSteve/CMakeFiles/Steve.dir/RnSort.c.o ../libSteve/CMakeFiles/Steve.dir/rxnparam.c.o ../libSteve/CMakeFiles/Steve.dir/SimCommand.c.o ../libSteve/CMakeFiles/Steve.dir/Sphere.c.o ../libSteve/CMakeFiles/Steve.dir/string2.c.o ../libSteve/CMakeFiles/Steve.dir/SurfaceParam.c.o ../libSteve/CMakeFiles/Steve.dir/Zn.c.o ../libSteve/CMakeFiles/Steve.dir/SFMT/SFMT.c.o ../NextSubVolume/CMakeFiles/nsv.dir/StructuredGrid.cpp.o ../NextSubVolume/CMakeFiles/nsv.dir/Species.cpp.o ../NextSubVolume/CMakeFiles/nsv.dir/ReactionEquation.cpp.o ../NextSubVolume/CMakeFiles/nsv.dir/NextSubvolumeMethod.cpp.o ../NextSubVolume/CMakeFiles/nsv.dir/Kairos.cpp.o ../NextSubVolume/CMakeFiles/nsv.dir/Io.cpp.o ../NextSubVolume/CMakeFiles/nsv.dir/Geometry.cpp.o ../NextSubVolume/CMakeFiles/nsv.dir/nsvc.cpp.o
/usr/bin/ranlib lib_pysmoldyn.a
gmake[2]: Leaving directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
[ 88%] Built target _pysmoldyn
/usr/bin/gmake -f source/python/CMakeFiles/_smoldyn.dir/build.make source/python/CMakeFiles/_smoldyn.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72 /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/python /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python/CMakeFiles/_smoldyn.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
/usr/bin/gmake -f source/python/CMakeFiles/_smoldyn.dir/build.make source/python/CMakeFiles/_smoldyn.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
[ 90%] Building CXX object source/python/CMakeFiles/_smoldyn.dir/CallbackFunc.cpp.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/g++ -D_smoldyn_EXPORTS -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/external/pybind11/include -isystem /usr/include/python3.13 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -Wno-unused-parameter -Wall -Wextra -DSMOLDYN_VERSION=2.72 -DENABLE_PYTHON_CALLBACK -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT source/python/CMakeFiles/_smoldyn.dir/CallbackFunc.cpp.o -MF CMakeFiles/_smoldyn.dir/CallbackFunc.cpp.o.d -o CMakeFiles/_smoldyn.dir/CallbackFunc.cpp.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/python/CallbackFunc.cpp
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolboxes.c: In function ‘boxesupdatelists’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolboxes.c:783:55: warning: argument 1 range [18446744071562067968, 18446744073709551614] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=]
783 | bptr->neigh=(boxptr*) calloc(nneigh,sizeof(boxptr));
| ^
/usr/include/stdlib.h:675:14: note: in a call to allocation function ‘calloc’ declared here
675 | extern void *calloc (size_t __nmemb, size_t __size)
| ^
[ 91%] Building CXX object source/python/CMakeFiles/_smoldyn.dir/Command.cpp.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/g++ -D_smoldyn_EXPORTS -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/external/pybind11/include -isystem /usr/include/python3.13 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -Wno-unused-parameter -Wall -Wextra -DSMOLDYN_VERSION=2.72 -DENABLE_PYTHON_CALLBACK -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT source/python/CMakeFiles/_smoldyn.dir/Command.cpp.o -MF CMakeFiles/_smoldyn.dir/Command.cpp.o.d -o CMakeFiles/_smoldyn.dir/Command.cpp.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/python/Command.cpp
[ 92%] Building CXX object source/python/CMakeFiles/_smoldyn.dir/Simulation.cpp.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/g++ -D_smoldyn_EXPORTS -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/external/pybind11/include -isystem /usr/include/python3.13 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -Wno-unused-parameter -Wall -Wextra -DSMOLDYN_VERSION=2.72 -DENABLE_PYTHON_CALLBACK -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT source/python/CMakeFiles/_smoldyn.dir/Simulation.cpp.o -MF CMakeFiles/_smoldyn.dir/Simulation.cpp.o.d -o CMakeFiles/_smoldyn.dir/Simulation.cpp.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/python/Simulation.cpp
/usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,--dependency-file=CMakeFiles/smoldyn_shared.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libsmoldyn_shared.so.2 -o libsmoldyn_shared.so.2.72 CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolbng.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolboxes.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcmd.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcomparts.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolfilament.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolgraphics.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolmolec.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolport.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smollattice.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolreact.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolrule.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsim.cpp.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsurface.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolwall.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/libsmoldyn.cpp.o source/libSteve/CMakeFiles/Steve.dir/Geometry.c.o source/libSteve/CMakeFiles/Steve.dir/List.c.o source/libSteve/CMakeFiles/Steve.dir/math2.c.o source/libSteve/CMakeFiles/Steve.dir/opengl2.c.o source/libSteve/CMakeFiles/Steve.dir/parse.c.o source/libSteve/CMakeFiles/Steve.dir/queue.c.o source/libSteve/CMakeFiles/Steve.dir/random2.c.o source/libSteve/CMakeFiles/Steve.dir/Rn.c.o source/libSteve/CMakeFiles/Steve.dir/RnSort.c.o source/libSteve/CMakeFiles/Steve.dir/rxnparam.c.o source/libSteve/CMakeFiles/Steve.dir/SimCommand.c.o source/libSteve/CMakeFiles/Steve.dir/Sphere.c.o source/libSteve/CMakeFiles/Steve.dir/string2.c.o source/libSteve/CMakeFiles/Steve.dir/SurfaceParam.c.o source/libSteve/CMakeFiles/Steve.dir/Zn.c.o source/libSteve/CMakeFiles/Steve.dir/SFMT/SFMT.c.o source/NextSubVolume/CMakeFiles/nsv.dir/StructuredGrid.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Species.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/ReactionEquation.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/NextSubvolumeMethod.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Kairos.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Io.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Geometry.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/nsvc.cpp.o /usr/lib64/libGL.so /usr/lib64/libGLU.so -lglut /usr/lib64/libtiff.so /usr/lib64/libz.so
/usr/bin/cmake -E cmake_symlink_library libsmoldyn_shared.so.2.72 libsmoldyn_shared.so.2 libsmoldyn_shared.so
gmake[2]: Leaving directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
[ 92%] Built target smoldyn_shared
[ 93%] Building CXX object source/python/CMakeFiles/_smoldyn.dir/module.cpp.o
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/g++ -D_smoldyn_EXPORTS -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/external/pybind11/include -isystem /usr/include/python3.13 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -Wno-unused-parameter -Wall -Wextra -DSMOLDYN_VERSION=2.72 -DENABLE_PYTHON_CALLBACK -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT source/python/CMakeFiles/_smoldyn.dir/module.cpp.o -MF CMakeFiles/_smoldyn.dir/module.cpp.o.d -o CMakeFiles/_smoldyn.dir/module.cpp.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/python/module.cpp
/usr/bin/gmake -f CMakeFiles/smoldyn.dir/build.make CMakeFiles/smoldyn.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72 /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72 /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/CMakeFiles/smoldyn.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
/usr/bin/gmake -f CMakeFiles/smoldyn.dir/build.make CMakeFiles/smoldyn.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
[ 95%] Building CXX object CMakeFiles/smoldyn.dir/source/Smoldyn/smoldyn.cpp.o
/usr/bin/g++ -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build -I/usr/include/GL -I/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn.dir/source/Smoldyn/smoldyn.cpp.o -MF CMakeFiles/smoldyn.dir/source/Smoldyn/smoldyn.cpp.o.d -o CMakeFiles/smoldyn.dir/source/Smoldyn/smoldyn.cpp.o -c /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smoldyn.cpp
[ 96%] Linking CXX executable smoldyn
/usr/bin/cmake -E cmake_link_script CMakeFiles/smoldyn.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=CMakeFiles/smoldyn.dir/link.d CMakeFiles/smoldyn.dir/source/Smoldyn/smoldyn.cpp.o -o smoldyn libsmoldyn_shared.so.2.72 /usr/lib64/libGL.so /usr/lib64/libGLU.so -lglut /usr/lib64/libtiff.so /usr/lib64/libz.so
gmake[2]: Leaving directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
[ 96%] Built target smoldyn
[ 97%] Linking CXX shared module /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/python/smoldyn/_smoldyn.cpython-313-aarch64-linux-gnu.so
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/_smoldyn.dir/link.txt --verbose=1
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/python/../Smoldyn/smoldyn.h:1045:16: warning: type ‘struct simstruct’ violates the C++ One Definition Rule [-Wodr]
1045 | typedef struct simstruct
| ^
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smoldyn.h:1045:16: note: a different type is defined in another translation unit
1045 | typedef struct simstruct
| ^
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/python/../Smoldyn/smoldyn.h:1106:19: note: the first difference of corresponding definitions is field ‘callbacks’
1106 | CallbackFunc* callbacks[MAX_PY_CALLBACK]; // Python callback.
| ^
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smoldyn.h:1045:16: note: a type with different number of fields is defined in another translation unit
1045 | typedef struct simstruct
| ^
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smoldyn.h:714:16: warning: type ‘struct latticestruct’ violates the C++ One Definition Rule [-Wodr]
714 | typedef struct latticestruct
| ^
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smoldyn.h:714:16: note: a different type is defined in another translation unit
714 | typedef struct latticestruct
| ^
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smoldyn.h:739:26: note: the first difference of corresponding definitions is field ‘nsv’
739 | NextSubvolumeMethod* nsv; // nsv class
| ^
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smoldyn.h:739:26: note: a field of same name but different type is defined in another translation unit
739 | NextSubvolumeMethod* nsv; // nsv class
| ^
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smoldyn.h:714:16: note: type name ‘NextSubvolumeMethod’ should match type name ‘Kairos::NextSubvolumeMethod’
714 | typedef struct latticestruct
| ^
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/NextSubVolume/NextSubvolumeMethod.h:137:7: note: the incompatible type is defined here
137 | class NextSubvolumeMethod
| ^
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolboxes.c: In function ‘boxesupdatelists’:
/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/Smoldyn/smolboxes.c:783:55: warning: argument 1 range [18446744071562067968, 18446744073709551614] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=]
783 | bptr->neigh=(boxptr*) calloc(nneigh,sizeof(boxptr));
| ^
/usr/include/stdlib.h:675:14: note: in a call to allocation function ‘calloc’ declared here
675 | extern void *calloc (size_t __nmemb, size_t __size)
| ^
/usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -flto -Wl,--dependency-file=CMakeFiles/_smoldyn.dir/link.d -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -o /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/python/smoldyn/_smoldyn.cpython-313-aarch64-linux-gnu.so CMakeFiles/_smoldyn.dir/CallbackFunc.cpp.o CMakeFiles/_smoldyn.dir/Command.cpp.o CMakeFiles/_smoldyn.dir/Simulation.cpp.o CMakeFiles/_smoldyn.dir/module.cpp.o lib_pysmoldyn.a /usr/lib64/libGL.so /usr/lib64/libGLU.so -lglut /usr/lib64/libtiff.so /usr/lib64/libz.so
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/strip /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/python/smoldyn/_smoldyn.cpython-313-aarch64-linux-gnu.so
gmake[2]: Leaving directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
[ 97%] Built target _smoldyn
/usr/bin/gmake -f source/python/CMakeFiles/copy_python_tree.dir/build.make source/python/CMakeFiles/copy_python_tree.dir/depend
/usr/bin/gmake -f source/python/CMakeFiles/wheel.dir/build.make source/python/CMakeFiles/wheel.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72 /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/python /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python/CMakeFiles/copy_python_tree.dir/DependInfo.cmake "--color="
gmake[2]: Entering directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72 /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/python /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python/CMakeFiles/wheel.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
gmake[2]: Leaving directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
/usr/bin/gmake -f source/python/CMakeFiles/wheel.dir/build.make source/python/CMakeFiles/wheel.dir/build
/usr/bin/gmake -f source/python/CMakeFiles/copy_python_tree.dir/build.make source/python/CMakeFiles/copy_python_tree.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
gmake[2]: Entering directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
[100%] Copying python source tree to binary directory
[100%] Generating wheel in /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python && /usr/bin/cmake -E copy_directory /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/python/smoldyn /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/py/smoldyn
cd /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/py && /usr/bin/python3.13 setup.py bdist_wheel -d /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build
gmake[2]: Leaving directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
[100%] Built target copy_python_tree
running bdist_wheel
running build
running build_py
creating build
creating build/lib.linux-aarch64-cpython-313
creating build/lib.linux-aarch64-cpython-313/smoldyn
copying smoldyn/__init__.py -> build/lib.linux-aarch64-cpython-313/smoldyn
copying smoldyn/__main__.py -> build/lib.linux-aarch64-cpython-313/smoldyn
copying smoldyn/smoldyn.py -> build/lib.linux-aarch64-cpython-313/smoldyn
copying smoldyn/types.py -> build/lib.linux-aarch64-cpython-313/smoldyn
copying smoldyn/utils.py -> build/lib.linux-aarch64-cpython-313/smoldyn
creating build/lib.linux-aarch64-cpython-313/smoldyn/biosimulators
copying smoldyn/biosimulators/__init__.py -> build/lib.linux-aarch64-cpython-313/smoldyn/biosimulators
copying smoldyn/biosimulators/__main__.py -> build/lib.linux-aarch64-cpython-313/smoldyn/biosimulators
copying smoldyn/biosimulators/_version.py -> build/lib.linux-aarch64-cpython-313/smoldyn/biosimulators
copying smoldyn/biosimulators/combine.py -> build/lib.linux-aarch64-cpython-313/smoldyn/biosimulators
copying smoldyn/biosimulators/data_model.py -> build/lib.linux-aarch64-cpython-313/smoldyn/biosimulators
copying smoldyn/biosimulators/utils.py -> build/lib.linux-aarch64-cpython-313/smoldyn/biosimulators
copying smoldyn/_smoldyn.cpython-313-aarch64-linux-gnu.so -> build/lib.linux-aarch64-cpython-313/smoldyn
running build_ext
/usr/lib/python3.13/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!
********************************************************************************
Please avoid running ``setup.py`` directly.
Instead, use pypa/build, pypa/installer or other
standards-based tools.
Follow the current Python packaging guidelines when building
Python RPM packages.
See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html
and https://docs.fedoraproject.org/en-US/packaging-guidelines/Python/ for details.
********************************************************************************
!!
self.initialize_options()
installing to build/bdist.linux-aarch64/wheel
running install
running install_lib
creating build/bdist.linux-aarch64
creating build/bdist.linux-aarch64/wheel
creating build/bdist.linux-aarch64/wheel/smoldyn
copying build/lib.linux-aarch64-cpython-313/smoldyn/__init__.py -> build/bdist.linux-aarch64/wheel/./smoldyn
copying build/lib.linux-aarch64-cpython-313/smoldyn/__main__.py -> build/bdist.linux-aarch64/wheel/./smoldyn
copying build/lib.linux-aarch64-cpython-313/smoldyn/smoldyn.py -> build/bdist.linux-aarch64/wheel/./smoldyn
copying build/lib.linux-aarch64-cpython-313/smoldyn/types.py -> build/bdist.linux-aarch64/wheel/./smoldyn
copying build/lib.linux-aarch64-cpython-313/smoldyn/utils.py -> build/bdist.linux-aarch64/wheel/./smoldyn
creating build/bdist.linux-aarch64/wheel/smoldyn/biosimulators
copying build/lib.linux-aarch64-cpython-313/smoldyn/biosimulators/__init__.py -> build/bdist.linux-aarch64/wheel/./smoldyn/biosimulators
copying build/lib.linux-aarch64-cpython-313/smoldyn/biosimulators/__main__.py -> build/bdist.linux-aarch64/wheel/./smoldyn/biosimulators
copying build/lib.linux-aarch64-cpython-313/smoldyn/biosimulators/_version.py -> build/bdist.linux-aarch64/wheel/./smoldyn/biosimulators
copying build/lib.linux-aarch64-cpython-313/smoldyn/biosimulators/combine.py -> build/bdist.linux-aarch64/wheel/./smoldyn/biosimulators
copying build/lib.linux-aarch64-cpython-313/smoldyn/biosimulators/data_model.py -> build/bdist.linux-aarch64/wheel/./smoldyn/biosimulators
copying build/lib.linux-aarch64-cpython-313/smoldyn/biosimulators/utils.py -> build/bdist.linux-aarch64/wheel/./smoldyn/biosimulators
copying build/lib.linux-aarch64-cpython-313/smoldyn/_smoldyn.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./smoldyn
running install_egg_info
running egg_info
creating smoldyn.egg-info
writing smoldyn.egg-info/PKG-INFO
writing dependency_links to smoldyn.egg-info/dependency_links.txt
writing requirements to smoldyn.egg-info/requires.txt
writing top-level names to smoldyn.egg-info/top_level.txt
writing manifest file 'smoldyn.egg-info/SOURCES.txt'
reading manifest file 'smoldyn.egg-info/SOURCES.txt'
writing manifest file 'smoldyn.egg-info/SOURCES.txt'
Copying smoldyn.egg-info to build/bdist.linux-aarch64/wheel/./smoldyn-2.72-py3.13.egg-info
running install_scripts
creating build/bdist.linux-aarch64/wheel/smoldyn-2.72.dist-info/WHEEL
creating '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/smoldyn-2.72-cp313-cp313-linux_aarch64.whl' and adding 'build/bdist.linux-aarch64/wheel' to it
adding 'smoldyn/__init__.py'
adding 'smoldyn/__main__.py'
adding 'smoldyn/_smoldyn.cpython-313-aarch64-linux-gnu.so'
adding 'smoldyn/smoldyn.py'
adding 'smoldyn/types.py'
adding 'smoldyn/utils.py'
adding 'smoldyn/biosimulators/__init__.py'
adding 'smoldyn/biosimulators/__main__.py'
adding 'smoldyn/biosimulators/_version.py'
adding 'smoldyn/biosimulators/combine.py'
adding 'smoldyn/biosimulators/data_model.py'
adding 'smoldyn/biosimulators/utils.py'
adding 'smoldyn-2.72.dist-info/METADATA'
adding 'smoldyn-2.72.dist-info/WHEEL'
adding 'smoldyn-2.72.dist-info/top_level.txt'
adding 'smoldyn-2.72.dist-info/RECORD'
removing build/bdist.linux-aarch64/wheel
gmake[2]: Leaving directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
[100%] Built target wheel
gmake[1]: Leaving directory '/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/CMakeFiles 0
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.TOZ6vh
+ umask 022
+ cd /builddir/build/BUILD/smoldyn-2.72-build
+ '[' /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT '!=' / ']'
+ rm -rf /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT
++ dirname /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT
+ mkdir -p /builddir/build/BUILD/smoldyn-2.72-build
+ mkdir /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd Smoldyn-2.72
+ DESTDIR=/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT
+ /usr/bin/cmake --install redhat-linux-build
-- Install configuration: "Release"
-- Installing: /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/bin/smoldyn
-- Installing: /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/libsmoldyn_shared.so.2.72
-- Installing: /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/libsmoldyn_shared.so.2
-- Installing: /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/libsmoldyn_shared.so
-- Installing: /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/libsmoldyn_static.a
-- Installing: /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/include/smoldyn/libsmoldyn.h
-- Installing: /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/include/smoldyn/smoldyn.h
-- Installing: /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/include/smoldyn/smoldynconfigure.h
+ pushd redhat-linux-build/py
~/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/py ~/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72
+ mkdir -p /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/python3.13/site-packages
+ cp -a smoldyn smoldyn.egg-info /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/python3.13/site-packages/
+ popd
~/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72
+ /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 2.72-5.fc42 --unique-debug-suffix -2.72-5.fc42.aarch64 --unique-debug-src-base smoldyn-2.72-5.fc42.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72
find-debuginfo: starting
Extracting debug info from 2 files
DWARF-compressing 2 files
sepdebugcrcfix: Updated 2 CRC32s, 0 CRC32s did match.
Creating .debug symlinks for symlinks to ELF files
Copying sources found by 'debugedit -l' to /usr/src/debug/smoldyn-2.72-5.fc42.aarch64
find-debuginfo: done
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
+ /usr/lib/rpm/brp-remove-la-files
+ env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4
Bytecompiling .py files below /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/python3.13 using python3.13
+ /usr/lib/rpm/redhat/brp-python-hardlink
+ /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT
/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/python3.13/site-packages/smoldyn/biosimulators/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/python3.13/site-packages/smoldyn/biosimulators/__pycache__/__main__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/python3.13/site-packages/smoldyn/biosimulators/__pycache__/_version.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/libsmoldyn_static.a: replacing with normalized version
/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/python3.13/site-packages/smoldyn/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/python3.13/site-packages/smoldyn/biosimulators/__pycache__/data_model.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/python3.13/site-packages/smoldyn/__pycache__/__main__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/python3.13/site-packages/smoldyn/biosimulators/__pycache__/utils.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/python3.13/site-packages/smoldyn/__pycache__/types.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/python3.13/site-packages/smoldyn/biosimulators/__pycache__/combine.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/python3.13/site-packages/smoldyn/__pycache__/utils.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/python3.13/site-packages/smoldyn/__pycache__/types.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/python3.13/site-packages/smoldyn/__pycache__/smoldyn.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/python3.13/site-packages/smoldyn/__pycache__/smoldyn.cpython-313.pyc: replacing with normalized version
Scanned 31 directories and 119 files,
processed 14 inodes,
14 modified (5 replaced + 9 rewritten),
0 unsupported format, 0 errors
Reading /builddir/build/BUILD/smoldyn-2.72-build/SPECPARTS/rpm-debuginfo.specpart
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.sSRHtG
+ umask 022
+ cd /builddir/build/BUILD/smoldyn-2.72-build
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
~/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build ~/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd Smoldyn-2.72
+ pushd redhat-linux-build
+ export LD_LIBRARY_PATH=/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64
+ LD_LIBRARY_PATH=/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64
+ export PYTHONPATH=/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/python3.13/site-packages
+ PYTHONPATH=/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/lib64/python3.13/site-packages
+ xvfb-run ctest -j1 -VV -R 'test_api|test_sanity|test_biosimulator' --output-on-failure --debug
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/cmCTest.cxx:429 Here: 429
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/cmCTest.cxx:713 UpdateCTestConfiguration from :/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/DartConfiguration.tcl
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/cmCTest.cxx:441 Here: 441
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/cmCTest.cxx:3101 * Read custom CTest configuration directory: /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/cmCTest.cxx:3106 * Check for file: /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/CTestCustom.cmake
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/cmCTest.cxx:3126 * Check for file: /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/CTestCustom.ctest
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/cmCTest.cxx:713 UpdateCTestConfiguration from :/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/DartConfiguration.tcl
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:411 Test project /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:1819 Constructing a list of tests
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2520 Add test: test_actions
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2563 Set test directory: /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2520 Add test: test_api
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2563 Set test directory: /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2520 Add test: test_biosimulators
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2563 Set test directory: /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2520 Add test: test_concurrent_simulation
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2563 Set test directory: /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2520 Add test: test_connect_func
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2563 Set test directory: /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2520 Add test: test_connect_var
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2563 Set test directory: /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2520 Add test: test_data_in_array
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2563 Set test directory: /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2520 Add test: test_data_outputfile
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2563 Set test directory: /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2520 Add test: test_getters
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2563 Set test directory: /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2520 Add test: test_issue_118
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2563 Set test directory: /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2520 Add test: test_libsmoldyn
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2563 Set test directory: /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2520 Add test: test_multiple_iterations
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2563 Set test directory: /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2520 Add test: test_prd_placement
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2563 Set test directory: /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2520 Add test: test_sanity
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2563 Set test directory: /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2520 Add test: test_sim_from_file
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:2563 Set test directory: /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/source/python
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:1885 Done constructing a list of tests
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:1032 Updating test list for fixtures
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:1255 Added 0 tests to meet fixture requirements
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/cmCTest.cxx:314 Current_Time: Dec 22 12:57 UTC
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/cmCTest.cxx:314 Current_Time: Dec 22 12:57 UTC
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestMultiProcessHandler.cxx:1519 Checking test dependency graph...
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestMultiProcessHandler.cxx:1548 Checking test dependency graph end
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestMultiProcessHandler.cxx:219 test 2
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:550 Start 2: test_api
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:711
2: Test command: /usr/bin/python3.13 "/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/tests/test_api.py"
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:719 2: Working Directory: /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/tests
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:727 2: Environment variables:
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:732 2: PYTHONPATH=/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/py
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:732 2: SMOLDYN_NO_PROMPT=1
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/cmCTest.cxx:314 Current_Time: Dec 22 12:57 UTC
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:831 2: Test timeout computed to be: 10000000
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:1010 1/3 Test #2: test_api .........................
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:1013 Testing test_api ...
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:272 Passed 0.28 sec
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/cmCTest.cxx:314 Current_Time: Dec 22 12:57 UTC
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestMultiProcessHandler.cxx:219 test 3
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:550 Start 3: test_biosimulators
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:711
3: Test command: /usr/bin/python3.13 "/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/tests/test_biosimulators.py"
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:719 3: Working Directory: /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/tests
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:727 3: Environment variables:
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:732 3: PYTHONPATH=/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/py
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:732 3: SMOLDYN_NO_PROMPT=1
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/cmCTest.cxx:314 Current_Time: Dec 22 12:57 UTC
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:831 3: Test timeout computed to be: 10000000
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:43 3: ssssssssssssssssssssssss
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:43 3: ----------------------------------------------------------------------
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:43 3: Ran 24 tests in 0.000s
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:43 3:
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:43 3: OK (skipped=24)
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:1010 2/3 Test #3: test_biosimulators ...............
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:1013 Testing test_biosimulators ...
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:272 Passed 0.30 sec
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/cmCTest.cxx:314 Current_Time: Dec 22 12:57 UTC
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestMultiProcessHandler.cxx:219 test 14
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:550 Start 14: test_sanity
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:711
14: Test command: /usr/bin/python3.13 "/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/tests/test_sanity.py"
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:719 14: Working Directory: /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/tests
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:727 14: Environment variables:
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:732 14: PYTHONPATH=/builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/py
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:732 14: SMOLDYN_NO_PROMPT=1
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/cmCTest.cxx:314 Current_Time: Dec 22 12:57 UTC
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:831 14: Test timeout computed to be: 10000000
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:43 14: Using smoldyn from /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/redhat-linux-build/py/smoldyn/__init__.py
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:43 14: test_newcursim
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:43 14: <smoldyn._smoldyn.simstruct object at 0xffffa75e6930>
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:43 14: Testing test_get_err
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:43 14: (<ErrorCode.ok: 0>, '')
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:1010 3/3 Test #14: test_sanity ......................
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:1013 Testing test_sanity ...
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestRunTest.cxx:272 Passed 0.25 sec
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/cmCTest.cxx:314 Current_Time: Dec 22 12:57 UTC
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/cmCTest.cxx:314 Current_Time: Dec 22 12:57 UTC
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/cmCTest.cxx:314 Current_Time: Dec 22 12:57 UTC
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:450
The following tests passed:
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:455 test_api
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:455 test_biosimulators
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:455 test_sanity
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:636
100% tests passed, 0 tests failed out of 3
/builddir/build/BUILD/cmake-3.31.2-build/cmake-3.31.2/Source/CTest/cmCTestTestHandler.cxx:652
Total Test time (real) = 0.84 sec
+ popd
+ RPM_EC=0
~/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72
++ jobs -p
+ exit 0
Processing files: smoldyn-2.72-5.fc42.aarch64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.w33X91
+ umask 022
+ cd /builddir/build/BUILD/smoldyn-2.72-build
+ cd Smoldyn-2.72
+ DOCDIR=/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/Using-Smoldyn-with-SED-ML-COMBINE-BioSimulators.md /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/README.md /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: bundled(SFMT) = 1.3.3 smoldyn = 2.72-5.fc42 smoldyn(aarch-64) = 2.72-5.fc42
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libsmoldyn_shared.so.2()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) rtld(GNU_HASH)
Processing files: smoldyn-doc-2.72-5.fc42.noarch
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.c4QJkV
+ umask 022
+ cd /builddir/build/BUILD/smoldyn-2.72-build
+ cd Smoldyn-2.72
+ DOCDIR=/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn-doc
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn-doc
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/docs/BioNetGen /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn-doc
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/docs/CMakeLists.txt /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn-doc
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/docs/Doxyfile.in /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn-doc
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/docs/README.md /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn-doc
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/docs/SmolCrowd /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn-doc
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/docs/SmolEmulate /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn-doc
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/docs/Smoldyn /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn-doc
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/docs/_static /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn-doc
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/docs/build_doxygen /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn-doc
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/docs/conf.py /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn-doc
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/docs/doxygen /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn-doc
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/docs/examples /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn-doc
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/docs/index.rst /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn-doc
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/docs/libSteve /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn-doc
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/docs/python /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn-doc
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/docs/requirements.txt /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn-doc
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/docs/tikz /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn-doc
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/docs/user /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn-doc
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/docs/wrl2smol /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/doc/smoldyn-doc
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: smoldyn-doc = 2.72-5.fc42
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: smoldyn-libs-2.72-5.fc42.aarch64
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.wdYabN
+ umask 022
+ cd /builddir/build/BUILD/smoldyn-2.72-build
+ cd Smoldyn-2.72
+ LICENSEDIR=/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/licenses/smoldyn-libs
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/licenses/smoldyn-libs
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/License.txt /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/licenses/smoldyn-libs
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/SFMT/SFMT-LICENSE.txt /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/licenses/smoldyn-libs
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/LICENSE /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/licenses/smoldyn-libs
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: libsmoldyn_shared.so.2()(64bit) smoldyn-libs = 2.72-5.fc42 smoldyn-libs(aarch-64) = 2.72-5.fc42
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libGL.so.1()(64bit) libGLU.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libglut.so.3()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libtiff.so.6()(64bit) libtiff.so.6(LIBTIFF_4.0)(64bit) rtld(GNU_HASH)
Processing files: smoldyn-libs-devel-2.72-5.fc42.aarch64
Provides: smoldyn-libs-devel = 2.72-5.fc42 smoldyn-libs-devel(aarch-64) = 2.72-5.fc42 smoldyn-libs-static = 0:2.72-5.fc42
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libsmoldyn_shared.so.2()(64bit)
Processing files: python3-smoldyn-2.72-5.fc42.aarch64
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.fjXY6n
+ umask 022
+ cd /builddir/build/BUILD/smoldyn-2.72-build
+ cd Smoldyn-2.72
+ LICENSEDIR=/builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/licenses/python3-smoldyn
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/licenses/python3-smoldyn
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/License.txt /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/licenses/python3-smoldyn
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/source/libSteve/SFMT/SFMT-LICENSE.txt /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/licenses/python3-smoldyn
+ cp -pr /builddir/build/BUILD/smoldyn-2.72-build/Smoldyn-2.72/LICENSE /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT/usr/share/licenses/python3-smoldyn
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: python-smoldyn = 2.72-5.fc42 python3-smoldyn = 2.72-5.fc42 python3-smoldyn(aarch-64) = 2.72-5.fc42 python3.13-smoldyn = 2.72-5.fc42 python3.13dist(smoldyn) = 2.72 python3dist(smoldyn) = 2.72
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libGL.so.1()(64bit) libGLU.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libglut.so.3()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.13)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.2)(64bit) libstdc++.so.6(CXXABI_1.3.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libtiff.so.6()(64bit) libtiff.so.6(LIBTIFF_4.0)(64bit) python(abi) = 3.13 rtld(GNU_HASH)
Obsoletes: python-smoldyn < 2.72-5.fc42
Processing files: smoldyn-debugsource-2.72-5.fc42.aarch64
Provides: smoldyn-debugsource = 2.72-5.fc42 smoldyn-debugsource(aarch-64) = 2.72-5.fc42
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: smoldyn-debuginfo-2.72-5.fc42.aarch64
Provides: debuginfo(build-id) = 0fb26024a31b3017f2723878377eb83d72d04df6 smoldyn-debuginfo = 2.72-5.fc42 smoldyn-debuginfo(aarch-64) = 2.72-5.fc42
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: smoldyn-debugsource(aarch-64) = 2.72-5.fc42
Processing files: smoldyn-libs-debuginfo-2.72-5.fc42.aarch64
Provides: debuginfo(build-id) = b496c21d3a0dac3b7a527dcc2451d36845db4c52 libsmoldyn_shared.so.2.72-2.72-5.fc42.aarch64.debug()(64bit) smoldyn-libs-debuginfo = 2.72-5.fc42 smoldyn-libs-debuginfo(aarch-64) = 2.72-5.fc42
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: smoldyn-debugsource(aarch-64) = 2.72-5.fc42
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/smoldyn-2.72-build/BUILDROOT
Wrote: /builddir/build/RPMS/python3-smoldyn-2.72-5.fc42.aarch64.rpm
Wrote: /builddir/build/RPMS/smoldyn-libs-devel-2.72-5.fc42.aarch64.rpm
Wrote: /builddir/build/RPMS/smoldyn-libs-2.72-5.fc42.aarch64.rpm
Wrote: /builddir/build/RPMS/smoldyn-2.72-5.fc42.aarch64.rpm
Wrote: /builddir/build/RPMS/smoldyn-libs-debuginfo-2.72-5.fc42.aarch64.rpm
Wrote: /builddir/build/RPMS/smoldyn-debuginfo-2.72-5.fc42.aarch64.rpm
Wrote: /builddir/build/RPMS/smoldyn-debugsource-2.72-5.fc42.aarch64.rpm
Wrote: /builddir/build/RPMS/smoldyn-doc-2.72-5.fc42.noarch.rpm
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.d2zCrK
+ umask 022
+ cd /builddir/build/BUILD/smoldyn-2.72-build
+ test -d /builddir/build/BUILD/smoldyn-2.72-build
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/smoldyn-2.72-build
+ rm -rf /builddir/build/BUILD/smoldyn-2.72-build
+ RPM_EC=0
++ jobs -p
+ exit 0
Finish: rpmbuild smoldyn-2.72-5.fc42.src.rpm
Finish: build phase for smoldyn-2.72-5.fc42.src.rpm
INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-aarch64-1734872166.924324/root/var/log/dnf5.log
INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz
/bin/tar: Removing leading `/' from member names
INFO: Done(/var/lib/copr-rpmbuild/results/smoldyn-2.72-5.fc42.src.rpm) Config(child) 1 minutes 32 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running RPMResults tool
Package info:
{
"packages": [
{
"name": "smoldyn-doc",
"epoch": null,
"version": "2.72",
"release": "5.fc42",
"arch": "noarch"
},
{
"name": "smoldyn-libs-devel",
"epoch": null,
"version": "2.72",
"release": "5.fc42",
"arch": "aarch64"
},
{
"name": "smoldyn-debugsource",
"epoch": null,
"version": "2.72",
"release": "5.fc42",
"arch": "aarch64"
},
{
"name": "smoldyn-libs-debuginfo",
"epoch": null,
"version": "2.72",
"release": "5.fc42",
"arch": "aarch64"
},
{
"name": "smoldyn-libs",
"epoch": null,
"version": "2.72",
"release": "5.fc42",
"arch": "aarch64"
},
{
"name": "smoldyn-debuginfo",
"epoch": null,
"version": "2.72",
"release": "5.fc42",
"arch": "aarch64"
},
{
"name": "python3-smoldyn",
"epoch": null,
"version": "2.72",
"release": "5.fc42",
"arch": "aarch64"
},
{
"name": "smoldyn",
"epoch": null,
"version": "2.72",
"release": "5.fc42",
"arch": "src"
},
{
"name": "smoldyn",
"epoch": null,
"version": "2.72",
"release": "5.fc42",
"arch": "aarch64"
}
]
}
RPMResults finished